BtaEX0041232 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000016077 | ZNF317

Description

zinc finger protein 317 [Source:HGNC Symbol;Acc:HGNC:13507]

Coordinates

chr7:14744446-14747553:+

Coord C1 exon

chr7:14744446-14744541

Coord A exon

chr7:14745028-14745110

Coord C2 exon

chr7:14745616-14747553

Length

83 bp

Sequences

Splice sites

3' ss Seq

ATTTTCCCAATTTGTTTCAGATT

3' ss Score

9.76

5' ss Seq

GTGGTAAGA

5' ss Score

8.24

Exon sequences

Seq C1 exon

GGTGCCAGGTGGGCAAACCCAGCCTCATCTCCCACTTGGAGCAAGAAGAGGAGCTGAGGACAGAGGATCGGGAACTTCACCGAGGCCCTTGTCCCG

Seq A exon

ATTGGGCAATGCCATCTAAAACCAAATGGTCAATTCTTATGGAAGATATTTTTGGGAAGGAAACATCTAATGGTGTGACAGTG

Seq C2 exon

GAAAACAGTCAGCTTGGAGAGGAGTCTGCGGAGTACACTAACCTGTTTGACGTCTTCAGCATAGGCGCTCATCTCACTCAGCAGATGGGAAGGCACACTGGCAAGAGACCGTACCACCACCGGGACTGCGGGGTGACTTTCAGGAACAGGTCCCATGTAACCCAACATGTGAGCATTTACAATGGGAGGAAGATGCATGAATGTCATCAGTGCCAGAAAGCCTTCACCACAAGTGCTTCCCTCACACGGCACAGGAGAATACATACTGGGGAGAAGCCCTATGAGTGCAATGCCTGTGGGAAGGCTTTTAATGACCCCTCAGCCCTCAGGAGTCACTCAAGAACTCATCTCACAGAGAAGCCCTTCGACTGCACTCAGTGTGGGAATGCCTTCCGCACCCTCTCCTCCCTGAAGATACACATGAGAGTCCACACTGGGGAGCGGCCGTACAAGTGTGACGAGTGTGGGAAGGCTTATGGCCGGAGCTGCCACCTCATTGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000016077-'9-9,'9-8,10-9

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.576 A=0.179 C2=0.103

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9)

Main Inclusion Isoform:

ENSBTAP00000021396