HsaEX6094183 @ hg19

Exon Skipping

Gene

ENSG00000105708 | ZNF14

Description

zinc finger protein 14 [Source:HGNC Symbol;Acc:12924]

Coordinates

chr19:19821282-19825296:-

Coord C1 exon

chr19:19825170-19825296

Coord A exon

chr19:19824900-19824960

Coord C2 exon

chr19:19821282-19823898

Length

61 bp

Sequences

Splice sites

3' ss Seq

TTTCTGGGTATGCATTTTAGGAA

3' ss Score

8.04

5' ss Seq

AAGGTGAGT

5' ss Score

10.47

Exon sequences

Seq C1 exon

GACTCAGTCTCCTTTGAGGATGTGGCCGTGAACTTCACCCTGGAGGAGTGGGCTTTGCTGGATTCTTCACAGAAAAAGCTCTATGAAGATGTGATGCAGGAGACCTTCAAAAACCTGGTTTGTCTAG

Seq A exon

GAAAAAAGTGGGAAGACCAGGACATTGAAGATGACCACAGAAACCAGGGGAAAAATCGAAG

Seq C2 exon

ATGTCATATGGTTGAGAGACTCTGTGAAAGTAGAAGAGGTAGCAAATGTGGAGAAACCACTAGCCAGATGCCAAATGTTAATATCAACAAGGAAACTTTTACTGGAGCAAAACCACATGAATGCAGCTTTTGTGGAAGAGACTTCATTCATCATTCGTCCCTTAATAGGCACATGAGATCTCACACTGGACAGAAACCAAATGAGTATCAGGAATATGAAAAGCAACCATGTAAATGTAAAGCAGTTGGGAAAACCTTCAGTTATCACCACTGCTTTCGCAAACATGAAAGAACTCACACTGGAGTGAAGCCCTATGAATGTAAACAGTGTGGGAAAGCCTTTATATATTACCAGCCATTTCAAAGACATGAAAGGACTCATGCTGGACAGAAACCCTATGAATGTAAGCAATGTGGAAAAACCTTTATATATTACCAGTCTTTTCAAAAACATGCTCATACTGGAAAGAAACCCTATGAATGTAAACAGTGTGGGAAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000105708-'5-5,'5-4,6-5=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.429 C2=0.060

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF054957=zf-CHY=WD(100=14.1),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5)

Main Inclusion Isoform:

ENSP00000340514