HsaEX6094725 @ hg38

Exon Skipping

Gene

ENSG00000198453 | ZNF568

Description

zinc finger protein 568 [Source:HGNC Symbol;Acc:HGNC:25392]

Coordinates

chr19:36925200-36950645:+

Coord C1 exon

chr19:36925200-36925258

Coord A exon

chr19:36936746-36936868

Coord C2 exon

chr19:36949512-36950645

Length

123 bp

Sequences

Splice sites

3' ss Seq

TTAGCATTATGTTTTTACAGGAA

3' ss Score

7.37

5' ss Seq

ACAGTGGGT

5' ss Score

2.99

Exon sequences

Seq C1 exon

CTTGGTGTTCTCAAGAGTCTGCCCTTTCCGAGGAAGAAGAGGATACAACCAGGCCTCTT

Seq A exon

GAAACAGTGACATTTAAGGATGTGGCTGTTGACCTTACCCAGGAGGAGTGGGAGCAAATGAAACCTGCTCAAAGAAACTTGTATCGAGATGTGATGCTGGAGAACTACAGCAACCTAGTCACA

Seq C2 exon

AAGTTTGGGAAGTTGATGAACAGATCAAGAAGCAACAGGAAACACTTGTGAGGAAAGTCACATCCATCTCCAAGAAAATTCTGATAAAGGAAAAAGTCATTGAATGTAAAAAAGTTGCGAAAATATTTCCTCTGAGTTCAGACATTGTTACTTCAAGACAAAGCTTCTATGACTGTGACTCACTTGATAAGGGTTTGGAACATAATTTAGACTTACTTAGATATGAGAAAGGCTGTGTAAGAGAGAAACAGAGTAATGAGTTTGGGAAACCATTTTACCATTGTGCATCCTATGTTGTAACCCCCTTTAAGTGTAATCAGTGTGGACAAGACTTCAGTCATAAATTTGACCTCATTAGACATGAGCGAATTCATGCTGGAGAGAAACCTTACGAATGTAAAGAATGTGGAAAAGCCTTCAGTAGGAAGGAAAATCTTATTACACATCAGAAAATTCATACTGGGGAAAAACCGTATAAGTGTAATGAATGTGGAAAAGCT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198453_MULTIEX1-6/8=3-8

Average complexity

C3*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.761 A=0.070 C2=0.047

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=100.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.8)

Main Inclusion Isoform:

ENSP00000334685