HsaEX6096978 @ hg19

Exon Skipping

Gene

ENSG00000166704 | ZNF606

Description

zinc finger protein 606 [Source:HGNC Symbol;Acc:25879]

Coordinates

chr19:58488449-58500089:-

Coord C1 exon

chr19:58499963-58500089

Coord A exon

chr19:58499575-58499670

Coord C2 exon

chr19:58488449-58491647

Length

96 bp

Sequences

Splice sites

3' ss Seq

TGCTTTTCCTCCATGCATAGGAA

3' ss Score

8.57

5' ss Seq

CAGGTGAGG

5' ss Score

10.07

Exon sequences

Seq C1 exon

GAACCAGTGACCTTCAAGGACGTGGCCGTGGACTTCACCCAAGAAGAGTGGGGGCAGCTGGACCTTGTTCAGAGGACCCTGTACCGTGATGTGATGCTGGAGACCTATGGTCACCTGCTCTCTGTGG

Seq A exon

GAAATCAGATTGCCAAGCCTGAGGTCATCTCCCTGTTGGAGCAAGGAGAAGAGCCGTGGTCAGTGGAGCAGGCATGTCCTCAACGCACTTGTCCAG

Seq C2 exon

AATGGGTGAGAAATCTTGAAAGCAAAGCATTGATCCCAGCACAGAGCATTTTTGAGGAAGAACAATCCCATGGCATGAAGTTGGAAAGATATATATGGGATGATCCTTGGTTCTCCAGGTTAGAAGTTTTGGGATGTAAAGACCAATTAGAAATGTACCACATGAACCAGAGTACAGCTATGAGGCAGATGGTCTTCATGCAAAAGCAAGTACTATCCCAGAGAAGCTCTGAATTCTGTGGACTTGGGGCAGAGTTTAGCCAGAACTTAAACTTTGTTCCATCTCAGAGAGTTTCTCAGATAGAACATTTCTATAAGCCTGATACACATGCTCAAAGTTGGAGATGTGACTCAGCCATAATGTATGCAGATAAGGTTACCTGTGAAAATAATGATTATGACAAAACTGTTTATCAGTCCATTCAACCTATTTACCCTGCAAGAATACAAACTGGAGATAATCTTTTCAAATGTACTGATGCTGTTAAATCTTTCAATCAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000166704-'6-5,'6-4,7-5=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.030 C2=0.023

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.6),PF139121=zf-C2H2_6=WD(100=4.1)

Main Inclusion Isoform:

ENSP00000343617