MmuEX6008389 @ mm9

Exon Skipping

Gene

ENSMUSG00000030386 | Zfp606

Description

zinc finger protein 606 [Source:MGI Symbol;Acc:MGI:1914620]

Coordinates

chr7:13074919-13081584:+

Coord C1 exon

chr7:13074919-13075045

Coord A exon

chr7:13075298-13075393

Coord C2 exon

chr7:13077706-13081584

Length

96 bp

Sequences

Splice sites

3' ss Seq

TGTCTTCCCTCCATATGTAGGGA

3' ss Score

9.95

5' ss Seq

CAGGTGAGG

5' ss Score

10.07

Exon sequences

Seq C1 exon

GAACCAGTGACTTTCAAAGATGTGGCTGTGGCCTTTACCCAAGAAGAATGGGGACAGCTAGACCTTGTTCAGCGGACTCTGTACCGTGATGTGATGCTGGAGACCTATGGACACCTACTTTCTGTGG

Seq A exon

GGAATCAGATTGCTAAGCCTGAAGTCATCTCCCTTTTGGAACAAGGAGAAGAGCCATGGTCAGTGGAGCAAGGATATCCTAAAAGCAGTTGTCCAG

Seq C2 exon

AGTGGATGAGGAATACTGAAAGCAAAGCGCTGATTCCAGCACAGAGTGTTTCTGAGGAAGAACAATCCAGCAATGGAATGATGTTAGAAAGATACATATGGGATAATCCTTGGCTCTCCAGGCTAGGAGTTCTGGGATATGGCGACCAGTTAGAAATGTATCACATGAACCAGAGCACAGGTATGAGGCAAATGGTCTTTATGCAAAAACAAGTACTTTCTCAACGAGGGTCTGAATTCTGTGAACTTGGCACAGAGTACAGCCAAAGCTTAAACTTAATTCCATCTCAGAGAGTTTCACAATTAGAACGTTTCTACAAACCTGATACACATCTTGAAAGTTGGAGCTGTAATTCAGCCATAATGTATGCAGATAAGGTTACCTGTGAAAATAGTGATTATAATAAAGCCTTTTGCCAGTCTGTTCAGCCTGTATACCCTGCAAAAATGCAAACTGGAGATAATCTGTTCAAATGTACTGATGCTGTGAAGTCTTTCAAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000030386-'11-11,'11-10,12-11=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.111 C2=0.028

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.6),PF139121=zf-C2H2_6=WD(100=4.1)

Main Inclusion Isoform:

ENSMUSP00000096421