HsaINT0090805 @ hg38
Intron Retention
Gene
ENSG00000002834 | LASP1
Description
LIM and SH3 protein 1 [Source:HGNC Symbol;Acc:HGNC:6513]
Coordinates
chr17:38898412-38914475:+
Coord C1 exon
chr17:38898412-38898519
Coord A exon
chr17:38898520-38914324
Coord C2 exon
chr17:38914325-38914475
Length
15805 bp
Sequences
Splice sites
5' ss Seq
AACGTGAGC
5' ss Score
6.06
3' ss Seq
AGTGCCTTCTGACCTTGCAGATA
3' ss Score
10.03
Exon sequences
Seq C1 exon
GTGCGCTACAAGGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAAC
Seq A exon
GTGAGCTCTTGCCCTGCCCTGCGGCATCCCTGCTGCCCTCTGTTTGGTCCCCTTCCTGCCAGCCTGGCAGACGCAAGCCTGGCAGATGTGAATGAGGCCAGTGCCTCCACTACCCCTGCCCTCCAGGGTGGGCCTGGGGAAGAGCTTGGGGTTCCCAGATGCCTCTTCTCTGTGTACCCCCAGACCACCAGCACGCATAGCATTTTCTTCTTGAAGGGACTGTATTCTGTGGGGGCCTGTGTGCTAAATCAGCCCCCACTCTCTCTGACTGTTGTTCTTTTTTCTGGATATCGTGGGTATCGGTGAAGACTGCATGTCTCATCTTAGCACAAAGGTCAAAACTGGGGGGCGGGGAGCACCTGGCCTCCCCTGGTCTGCGCCTGGGTGCTGACATTGCAGTCATTTCCGCCCTTCCTTGGCCTCCTCCCCCACATCAGCCTGCTCTTCCTTCCTGTGTAAAAACCCCAGCCAGCTTCACCCGCCAGCCCTGCACCCCCTGGCTCACACCCCCCGCCTCCCTGATGGTCAGTGGCATCTGGCTGTGGCAGGGGTGGGCATGGAGAGTGGGCAGGGGATCAACTGTCCCCAGCATCGTGTGCCCTCCATGGCACCTGTGGCCAGAGAACAGGCCTCAGTTTCCTGCTTGGCAGAGCCACAGGCAAGCAGCCTGTGTGGCTTTAGGCATGCGGGGGCAGGGCACTGCGGTGAGCAGCAACCATGGGGGATGCGCACACAGAACTGCAGGGGCTGCCCAGCCAGCCTGGCCTAGGAGGTCCTGCCAGGGAGGGTTTAGGCAGGCAGCTGTCTTCGTGTCTGGAACAGGAAGGGATCAGTGAGCTGCCCATTGTTGCTCTGGGCTGAGGAACTGGGGATAGAGATTGCCGGGGGAGCCTGGCTTTCCGGTGGTCTCAGCACCCACTCCCTGGGCTCCACATCCCTTCCTACCCTCCACCTGGCCACCTCAGCAGGGCGCTCCTTTAAGAGCTTGGCTGGGCCGTGCATAGAGTGGGCTGCAGTGGTGGGTCAGGTGGATTTCAGAAGCACAGGCAGCCCACAGACAGCAGAACCAGCCATGCCCAAAATGGTGGCTTTCAAACTCTGACTTCAGCCTACAGTAAAATATACATTGTACGTCTTGACCCATCTGACAGGCATACATTTATGTAGAGGGAAAACAGAATGGAAGCTTTCATGAATGAGTACTTCCTACTTAGAGGGCGTTCAGATCTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTTGCTCAGGCTGGAGTGCAGTGGTGCTCCGCCTCCAGGGTTCAAGTGATTCTCCTGCCTTAGCCTCCCAAGTGGAGTAGCTGGGATTACAGGTGCACACCACCACCCCCGGCCAATTTTTGTATTTTTGGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACACCTGACCTCAGGTGATGTGCCCGCCTTGGCCTCCCAAAGTGCTAAGATTACAGGTGTGAGCCACCGCACCCGGCCACATTCAGATCTTTTCTAAAGATGCTGGTTGCAGGCCCCTATACACCCTCACATAATACAGCCCCTTTGAGGACTGTATTCCCAACACTTTGGGAGACTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTTGAGACTAGCCTGGGCAACATAGCAAAACTGTTTCTACAAAAAAAAAAAAAAAAAAAAAAAAATACAAAAACTAGCCAGGCATGATAGCACACGCCTGTGGTCCTAGCTATTCAGGAGGCTGAAGTGGGAGGATCACCTGAGCCCAGAGGTTTGAGGTTATAGTGAGCCGTAATTGCACCACTGCATTCCAGCCTGGGAAACCGAGTGAGACCCTGTTTCCAAAAAAAAAAAGGACCAGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGCTGAGGTGGGCGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGAAGAACCGCTTGAACTCGGGAGGCAGAGGTTGCAGTGAGTCGAGATCGGGCCACTGCACTCCAGCCTGGCGACAGAGCAAGACTCCATCTCAAAAAAAAACCAAAAAGATGCTGGTTGCAGACTTACTGTGAATGGGTTTTGCAACTGGACTGTTGACCTGCAGTTTGAAGTTGGTGGCCTGAGGAAATGGCATGCTTCCCTTTGGCTAGCAGGGGATGCCTAGGGCGGGCACTCTAATCCTCCTTCCCCTCCAACTTCCAGAGGCCTGTCACAGTTGACTCTTTATATGCTAGGGCCTGGCCTCACGCCCTGGAGCTTCCCTTTGGCTCAGACCCTGCAAAGGGTAAGACCCTTAGGTCTGTGTTTCAGAGCTCTCGGCTTGGAAAGTGGGGGAGGGGGAAGATGGTCTTAGATTATGGGGAAAACCCGGAATGGTTCACAGAACTGGAATGTCGGCTCTTCAGCCTCTGCGGCTTTTCATGTAGAGGCTCTAGTCTTTTATCAGTGACACTTGCTCCCAATGTGCAACCCCAGCTCCCTGGCTGTTCACTCATTGCTTCACCCTGTGGGTTTTGGAGGAGGGGAGACAAGCCCAGTCATCCCTGCTTCCCTTTCTGGAAGGCTTCCAGAACACTCCACACTCAGCCTAAGCCACCTCCTCTTCTTCCCTCCCCCAGTTAGAGGTGTTAATATCCTAGTGACAAAACTCACCACCCTGGCCAAGCCATCCGCATCTCAGGAGATAACCATCTTTTACCCTTCTCGCGGTGCTGCAGTGAGCTAATGGTCCTCTGCAGGAGCTGGGGGAAGGGATCGACCCCGACCTGCTAGCTGCTTTTGCAGCTTTAGCAGAGACCTGTAGGGTGTGAATGCAAAGCCTGGAGACTCTTGGTTTTAATGAAAGCAATTACAGTCTGTCGGATATGGGCCTCCAGACAGCTGTAGCACAGTCACCTGTAGGGTTGACTGAAAATGCAGACTCACAGGCCTTCTCCCCTGGCTGCCAGAATCAGCGTCTCTGGGAGTGGGGCCCAGGAATCAGCATGTTAGACACATTCCCTGGGTTTCTGTGGTGCTCTCTGAAGTTTGAGAGCCACCACCTAAAAGTCTGAAAAAGCTTCACCAACCCCTAAGTCAGAGGGTGCCAGATCAGGCTGTACCTCAGAACCCCAGGGGAGCTTTATTTTTATTTTTATTTTTTTGAGACGGAGCCTTGGTTTATCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCACGCCATTCTGCTGCCTCAGCCTCGTGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATAGTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCGTGTTAGCCAGGATGATCTTGATCTCCTGACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGACACCGAGCCCAGCCTATTTTTATTTTTGAGACAGGGTTTCGCTCCGTCATCCGGGCTGGAGTGCGGTGGTGTGTTCACGGCTCAGTGCAGCCTGAATCTTCTGGGATCAAGCCATTCTCCCACCTCAGACTCCGAGTAGCTGGGACCACAGGTGTGCACCACCATGCCCAGCTAATTTTTCTTTTTTTTGCAGAGACACTATCTTGCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGATTCAAGTTATCCTCCCGCCTCAGCCTCCTAAAGTGCTGGGATTATAGGGGTGAGCCACCTCACCTGGCCTCCCAGGGGAGCTTTTTTTTTTTTTTTTTTTTTTTAATCAGAGACAGGGTCTCACTATGTTGTCTTAAACTCCTGGACTTAAGTGATCCGCCCACCTCGGCCTCCCAAAGTTCTGGGACTACTACAGGCATGAGCCACTGCGCCTGGGAGCTTTAAACCACACATAAAACCATTGCTAAGTTGTCCCAACCTCCTGAAGTGTTTTGGAAAATAGGGTGTTTAGAGCCACACCTTTTGTTTTGTATCCAAAATAGCATTCCTGTTCCTGTATGTAGCTTGTTGCTTTGCTTCCCAGATTAGCACCAAATGACTCCAGTTACTTTATTTATTTATTTTTAATTTTAGTTTTATTTTATTTTTGAGATAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTGAAGCGATTCTTCTGCCTCAGCCTTCTGAGTAGCTAGGACTATAGGCACATGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGACACAGGGTTTTGCCATATTGGCTCGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAGGTGCTGGGATTACAGGTGTGAGCCACTGTGCCCAGCTGACTCCAGTTATTTCTAAAGGTCAGGCCATCTTACAAAAGAATGAGGATATGCTTCCTTGGAGGGATATGCTGCAGACTAGGGCTTTTTACCAGCCAGAGCATTTTAAAAACAAGTGTCTGATCTCCTCTGGGGTGTCTGCTTTGGATAAGTGCAGTCTGTCTTCAGTCTTGCTAAGTGGTGAGACAGTGAGGTAGGAAGAGATGGTAAGGGCCCAGATCCTAGCTTCTGTCATTCTGGGGCCAGGCAGGGCTCTTTGAGCCTCAGTTTCCTCATTTGTAAAAATGGGACAGTAGGCCCTACTTTGACAGGTGGTTGCAAGGAACATGCCAAGTGCTTGGCATGGGATAAATGATATCACTCTTATTATCATCATTATTATTTTTGAGACAAGATTGCCCAGGCTGGAGTACAGTGGCACGATCATAGGTCACTGCAGCCTCGAACTCTTGGGCACAAGTGGTCCTCTCCCGTCAACCTCCTGAGTAGCTGGTACTACAGGCATATAGCACCATGCCCAGCTAATTGTTATTTTTTTTGTAGAGAGAGGGTCTTGCTATGCTGCCCAGGCTGGAGTGTAGTCACGTGATCACAGCTCACTGCAGCCTTGAACTCCTGGGTTTAAGTGAACCCTGGCCTAAGACTCCCAGGTTGCTGGGATTACAGGCACACGCCATCACACCCAGTTATGTTGTCAATGTTATCAATACTTTAAAGGCACACTTGTCTGCTTTCTACACTGTTGCCGGAGAAGGGTCATAAAGTGAAGTTTGGCAGAAAAGTTTGGCCATTGTCTAGTACTGAGAATGTGTGGAAGTGAGGAAAGGGGCCAGTATATTACACATCTATGGTGAGTAGTTGTGTCATCATTAAAGGCATTTGAAGAGTTGCCTTTTGATGGGTCCATGCTATGGGATAAAGGTTACATGTTAGGAATCCTGGCCTTTTGTCATGAGCTCTAGCAGTGTTCAAGTATGGAAAACTTTAGTCACTTTACTGGAGCCTCTTCTTTTATTTACTTACATATTGATTTTCTGTATACAATTTTGTGTCCTTAAAACTTTTTTTATGTGTGAAATATGACACATAGTAACATATACAATAAACACCTGTTTCACCAGGCAGGTATACCATACATTGTATTACTGTATGCCTGTCAAGAGCCCAGTGTTCACAGTGTTAAAAATATAACTCCCATGTAGTAAGTACTTATCATATCTTTATTTAATTATGAGGGAACCAGCTAGAGATTAAAACTGGGGAATATGAGAGGCAGAGGTAAATGCTAGTCTGTGAAAGAAAGTGCTGGGGCCGGGCGAGGTGGCTCATATCTGTAACCCCAGCACTTTGGGAGGCCGAAGCGGGCAGATCACCTGAGGTCTGGAGTTCAAGACCAGCCTGGCCAGCATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGTGCACACCTGTAGTCCCAGTTACTTGGGAAGCTGAGGCAGGACAATTGCTTGAACCCGGGAAGTGGAGGTTGCAGTGAGCTGAGACTACACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCAAAAATAAAAAAAAAAAAAGGAAAAAAGAGAGTACTGGATACATTTAGCTACAGAAATGGTTAAGGGCCTACCATTAGTTACACATTGGCTATTGTCCTACAGGAAAATAAAACCATAAACTTTGAAGATATCTTTGCTGCAGGCAGAAATGCTTTGCATCTCAGTTGGCCAGAAATAATGAGCATTTTATACTCTGTAATGAGCTTCAGTCTTTAGAGTCTGGGCCTAATCAATAGTAAATAGTCAAACAAAGTTTTGTCCCCAGAGTAAAATACTCTGAAGGCAGGTTTGTTGGACAATCCTCTAGTTTGATTTTGAAAGCATGTATTTTTCATTATAATTTTAGTATGTAATTATGTATTCTTAAACACTATAGTTTTGCTTTTCCTGATTTTGAACACAGAGTAATTTTGTGTATCTTGCTTCTCTTACACACCATTGGGTTTAAAGATTCATCCATATGTTTGTGTGTAGCGGTAGTACATCCTTTTTCATTGCTATATAGTATTCCATTGTTTGTTTATACCACATTTTATTGATTCTGTTGCTGGTGGACATTTGTACTGTTTCCAGTTGCTATGGACATTTTTGTACATATCTCCTGAGGTCTATGTACATTGGAACTGCTGCATCTTAGAATGTGTGCTCCTTGGGCCGGGCCGTGGTGGTTCACACCTGTAATCCCAGCACTTTGGGAGACCGAAGTGGGTGGATCATGAGGTCAAGAGATCAAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCAACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGCACTCGGTGGCGCAATCCCAGCTGCTCTGGAGGCTGAGGCAGGAGAATCACTGAACCTGGGAGGCAGAGGATGCAGTGAGTTGAGATCGCACCACTGCATTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAGTGTGCTCCTTCAACTTTACGAGATAATGCGGAACTATTTTCCAAGTGGCTGCACTGATTTACCCTCCCACCAGCAGAGATGAGTTTCATTTGCTCCATGTGCTCAGATATGTTCACTTTAGCATTTTGATCGTGTAGAGTGTGATAGCCGATGGTTTTAGATTGCATTTCTGTGATTACTAATGAAGTTGAGTACAGACTTTTGTTTGTTTTAAAAATAAAATACTGGGGCATGGTGGGCTCACGCCTGTATCCTAACAGTTTGGGAGGCTGTGGTGGGAGGATTGCTTGAGGCCAGGAGTTTAAGACTTGCCTGGGCAACATAGCAAGATACCATCTCTACAAAAAAAAGAAAGAAAATTAGCCGTGCATGGTGGCATCCACCTGTAGTCCCAGCTACTCGAGCGGCTGAGGTGGTAAGATTGCTTGAGCCCAGGAGTTTGAGGCTGCAGTGAGCCATGATCACGCCACCGCACTCCAGCCTTGGTGACAGAGCGAGACCCTGTCTCTAAAAAATAAATAAATAAAATATTGTGAGTCTCTGATGGGGAGCAGTATTGCATGGTGGTTGAGAACTGAGGCTCTGATGTTAGAACTGGATTCTGACTTAACCCACTGTTTGCCCACATCTTGAGCCTTGGTTTCCCTATCTGTAAAATGGCAGTATTCTCGGGCTGGCTGAGGAAAGGAAATGAGGCCAGGCGCGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGCAGGCTGAGGCAGGTGGATGATTTGAGGCCAGGAGTTTGAGATCAGCCTGACCAACATGGCAAACCCCCGCGTCCACTAAAAATAGAAAAAAATAGCTGGGCATGGTGGTGCACCCCTGTAGTCTCAGCTACTTGGGAGACAGAAGCAGGAGAATTGGTTGAACTTGGAAGGTGGAGGTTGCAGTGAGCTGAGATCGCACCACTGCACTCCATCCTGGGCGACAGAGCAAGACTGTCTCAAAATAAATAAATAAATAAATAAATAAAGTTAAAAAAGAAAAGGAAATGAGTAATGCATGTAAGGGCACCCAAAAAAAGACCCTAGCTGGTGAGCTGATGATTCCACCCAGAGCCTGCTGTTCCCTCGTTCACTGTGATGTATAATCATGTGAGGAGCACCGTATGGAGAGTCAGACTTTTATTTTCCACCACAGTTGGGAGAGCAGGGGGGTCAGAAAACAGAACATCAGCTAGCAGAGCTTTGTCATGGACCCTAACTTGTCATCCTGGAGTCCCAGCTAGTAGGGTCCTGGCTGAGTCGGGAGGGTCCTTAGGCCTGGACCCCTGAACCCACATGTACTTGGACCTCATGGGCACAGGTAGAGTGTGGCCTGTGTCCACAGAGGCCCAGGACAGCTTCCAGGCTGGGGGCTGTGCTGACATGTCTGGGCTTAGGGCGCTCCTCACTCAGGGCTCTCTGAAGGCCAGAACTTTGCAGAGCTTGGAGCAGGGATGAGCCAGGCCCTTGGAAGCTGGGAAATGTTTCCTTGCCTTCTGAATGTGCTAACATCCCCCTCATGTGCCTATTTGCTTAACAAACCAGTAGGTGGGTCAGGAAAGTAATAACACAATTTCCTCATTTGCTGGCGAGGGGAAGGAGAGGAAGCTGAGGGTTTGGAAATTTTATCCAAGTGGGCCCAGGCTGGAAGGAGCTGAGCCTCACTTTTTCTCAGCCCATTTAGCCGCTCTGTGCCGCCTGTCCTGAGTTGCATGCCTGGTGTCCCTCTCTCTCGAGTTAGGGTGACTTTCTGATTATCATTCTTGTTGAGAGTGAAAAGGGGTGCATTGAAATTTATCCCTGAGCAGCAGACATGAACTGGGACTTGGGCGTGTGGTCACCCTGCTCCACACCTGTTCTCAGGAAAGGGCCTGTCTAGCTGTGATTTTGTCCTTGTGTCACCAGCCTTGGCTGTTACTGAGCAATGAAAGCTCTGCCTCGGGAAGTCATTTAATTTCTGAGCCTCATGTTCCTCTTCTGGAAGATGGGAATGAAAGTGTGCGTGTCCGGCCCATTTTTTAGGGCAATGATTGTCAGGGTATGAAGAGCTTGGTCAAGCTGTGTGAAGAGCTGTACAGCTGCAGAGGTTGTTAACATTGATAGAGCCACCCAGGAAGGGTGTCCTGGGTTCAGGCAGCTACTCCTCCAGCCGTCGGGTCAGCCAGCCGTAACTTTAGATACACTTATCCATGTGTAATGACTTTTTAAGAAGCAAGATCAGTTTCCCCAGCCCTTTATGGGAATACCCATGTGTCCATACTTGCTTTCAGCTTAGAGTTTGCTCAGGTTCCTAGAGCTGGTCAGGGTTTGCAGGACCGCCTGGGAGCAGATGGTACCATGGCCTTATTTACAGATGAGGAAACTGAGACCCAGAGGGGAAAGTGACTCCCAAGGTCATGTAGGTAAGCATACGGCTCCCCTAAGGATGAGGCATTGGTCTGGTGACAGTGCAGCCCATCATAAGGGACTGAGCCTGTGGGGTCCAGACCTGCTCTCCTCCCAGAGGAAAAGGCTCCCTGTCACCCCATCGCTAATGCAGATAGCGTCATGTCCAGGGAAGCTGTCACACATTCATCTGGGCCCCCAACATCAAGGACACCTGTCCCTGCAGGCCCCCTGCTGGCACCTTCGGGGCCCAGGGCAGGCCCCTGTCCATTCCGTGTCTGCACTTCCCTCCCTGGTCACAGGTTCTCAGGGGCAGGCTCTTTTCCTTAGCAGAAAGGAAACAAGGGAAGCTGACCTTTCCCACCTCAGAACAAAAGTTGGAAGGGCAGGTGCCTCGTGAGCCTGGAGGCCTCAGGAGGGGTGTCCCCTTCCCTTGTGCCCTCCCCGCCACCAACACCAGTGGACAGGGATCACTAAGAGAGTGGGGCTCGGGAGACTCACCTTCTGCGCTGGGTCTGTGAGAACATCACCTGGAGTGCCCCTCCCAGCGGATGCTGGGGTCGGTTGGATTTTCAGCCTGGCCAGGGTTGGCTGCCTCACCTCAGGAACAGGCTTAGCCTGTGCTGCCACGTGGGTGCCGGTCCTTGCTCTGGCCTGAAGGGAGGGGGCCGGGAAAGGAGGGACTGATCCTGACCCAAACCCCTAAGTAAACTGCCCTCTGCGTCCAGACTGGACTCCCCCCAGACTCTGTCCAGGCCCTTACCACTGCCCTCCCTGTGCCCCCAGCCCGGGCTGCAGGAACTATTGGCTGTTCAGCCAGCAGGAGCAGCAACCATGCAGGTGTTTCCAGCTGTTAACGTGTAAGCCCTGCCTGGCCACGTGCTTGCTCTTGCCTTTTGTGCACAGCCAGTGCCAAGGGGGAGAGGAGGCAGCAGAGACGTTGTGCGGAGGGGATGCCCAAAGGGGACTGCCCAGGCTGGGACAGCCCTGATGGGGCAGGGGCGTTCCAGGAAACAGCAGGTTTTGCCTCTCCTCCTCTTCCCACCCCACTACTCCCACCCCATTTTCCCGGATCAGGAAAAGGCAGGCCAGCATTCTAGGGAACAGGAAGTGAAGTTGGCTTCCAGCTAGGTGCCTGCCAGGGCCTGGAGGAAATTCCTGCAGGCCTGAGCCCGTCTGGGAAGGACCAGTTTCTCTCCTTGTCCTGGTGTCCTGCTTTCTGAGTTTCCCCTGAGGGTGGGGGAGAGCTGTCACTCTCTTCACTCTATGTCCCGCTTCCTCCCCCATCCTCATGGAGCACTCAAACCCTGAACCCTCACACCTTTCTATGGTTGTACCCGTCCCCACCAGTTTCCTCTCTGGAAAGTGAAGAGGAGGCTGGGCACGGTGGCTCACGGCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACAAGGTCAAGAAGTTCAAGACCAGCCTGGCCAACATGGTAAAAGCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCAGTTGCCTATAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGCATCACTTGAACCCGGGAGGCAGAGGGTGCAGTAAGCCGAGACTGTGTCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAGAAAGAAAAGTGAAGAGGATAGAGCCCACTAGGGGTCATCAAGGTGTGGGACAGGCAGCATGTTCCTACAGGAAGAAAACTCTAACTCCTGGTTCTGGTTCTTTTTCATCTCATTCATTCATTCATTCATTCATTCATTCATTTGTTTTGAGATGGACTCACTCTGTCTCCCAGGCTGGAGTACAGTGGCTCGATCTCAGCTCACTGCAATCTCCGTCTCCTGGGTTCAAGTGATTCTCATGACTCGGCTTCCCAAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGATTAAGTTTTGTATTTTCAGTAGAGACAGGGTTTCACTGTGTTGGCCAGGCTAGTCTTGAACTCCTGACTTCAAGCAATCTGCCAACCTCGACCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCATCTCATACTTTCACAATTCATTCTTTGGTGCAAGTTTTACAATATACATTCTATATTTGTCAAGTGATAACTTCCATGTAACTTATAAAATACACATAATTCAGGAAGATTGTGCTAAAATACATTTAACCAATAGGAGTATGCCGTCAGAATATTTTGGCAAACAAGGGTCACTAAGTTTTTTCTGTAAAGGGCCAGGTAGGAGGTATCTCAGGCTTTGTGGCCATATGGCCTCTGTGGCAGCAGCTCAGTTCTGCAGTTCTGCCATGAAAGCAGCCACAGATAAGAGGTAATTGAGTGGGTGTGGCTGTGTTCCAATAAAACTTTATTTCTGGAGGCTGAAATTTGAATTTCAGAGAAATTTCATGTGTCATGAAATATTATTCCTCTTTTGGTTCTTCTTCCCCCCCTCCACCGCCCCCTGCCAAGCATTAAAGAATGTGGAACCCGTTCTTAGCAGCCGGCTGTGGGCTGGATTTGGTCCATGGACCATAGATTCCCAGCTTCTGCTCTAGACCACCCGTTCTCAGACTTGAAGCCTGCTTCAGACTTACCTGGAGAGCTTTTTTCCAAAATGCATATTCCAGAACCCCAGCCCTGATTTTGTAGATTTTCTGGAAGGCCCCAGAACCCGCATTCTAACAAGGAGCCCAGTTGAGTCAGACACAGGTAGTCTGGAGTCCACTTTTTTTTAAACAGAGTCTCAGTCTGTTGCCCAGGATGCAGTGCAATGGCGTGATCTTGGCTCACTGCGACCTCCGCCTCCAAGGTTCAAGCAATTCTCGTGCCTCAGCCTTCCGAGTAGCTGGGATCACAGGTGCCTGCCATCATGCCCAGCTAATTTTTGTATTTTCAGTAGAGACGGCATTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCAGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGCGCCCGGCCAGGAGACCACATGTTAAGAAGCAAAGCTCAAGGGTCTCCAGGATCCTGGTCTGTTCTCTTCAGCCAGTCCTGAGGCCTGGGGTGTGCAGTGCTGTGGGAGACCCCTGCATCAGAATAACTGGCTCCTTCACTACCTTCCAGGAGCTTCCATCCAGTGGGGGTGGGGGACACCACCCGCCAACAGCACAGCCCAGTCCCAGGTGCTATGGAAGCCCTGGGTTCAGCCTGGAGCCAGGGCCAGCGTCCCGAGGATGAGGTGCCGAGATGGACCTTGAAGGATGAGAGAAGCCTGGACTGCCCTTGAGTGGCGAGGGTGGGCTGCCTCCAGGTTGACCTTAATCCCTTCCCTCCCTACCACCATGTGTCCAGATGACCTTGGGCAGGTCCCTTAGCCTCTCTGGATATCGGGATATGACATTGACTACCTCAGAGACTTGTGGGGAGGATTCGGCGAGCTGATATGCATGAAGTGTATCAACTAGGGCTGCTGGCTGGTATCTCCTTCCCTTGTCTTCCCCCACCACCCCAGCCAGGGGACAGGGTGCTGCTGAGGGAGTGGGCTGGGAGAGTCACTTCTGGCCTTGTCTTAGGGATCTGAGAACAGGGCATGGGCCCCGTGTCTGGGAGTGCCCTGGTGCCCTTCCTAGTGGGGTTGGGCGTGGTCAGTCTGGCCAGGGCTGGCTCCCTCCCCCATAAATAGGCTCACCTGGAGGTCTTTTCCCATTTGAGGCAATGAGATATGTATGTGAGGCTTTATGACTTGTCTTTTTTTTTTCATTTTGAGACAGAGTCACGGAGTCTCACTCTGTCACCCAGGCTGGAGTATAGTGGCATGATCTTGGCTCACCGCAACCTCTGCCTCCCAGGTTCAAGCTATCCTTTTGCCTCAGCCTCCCGCGTAGCTGGGATTATAGGCGCCCGTCACCACACCCAGCTAATTTTTGTAGTTTTAGTAGAGACAGGGTTTCACCAAGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGACCCACCCACCTTGGCCTCCCAAAGTTCTGGGATTACAGGCGTGATCCACCGTGCTCGGCCTCACCACCCGCCTTTCTTGTGGTGTAGTTCTTGCTGCCTCAAGAACTACATATATCAGGCCTCAAAACCCACCTGATATATGCGTGCCTGGGAATAGGGACCTTGACTTTTCCCCTGTCCCATATGGGCCCAGGGGCCGGTTCTGGGCTGGCCCAGGTGGGGCTAGAGCAGCTGGATCCAGGCACATGAGATGTGAAAGTGTGGGCCTTACGCCGCATGGAGCGGCTGGAGGAAGGAGAGAGGGAGCAAGGGTGCCGCAGGGTCAGATTGCCACAGGGCCAGGGTGCCACAGGGTCAGGGTAGGGCCAGGGTGCCATAGGGTCAGAGTAGGGCCAGGGTGCCACAGGGTCAGGGTAGGGCCAGGGTGCCGCTGGGCCAGGGTGCCGCAGGATCTGGTTGCCACAGGGTCAGGGTGCCGCAAGCACAAGGAGTCACCCGTGATTCTCCAGGGTCTGGCTCTTGGGCTGAGATCCAGGAGACCTTGGCAGGCCTGTCTTTGGGAGTCTGGCACAGCCCCAGAAGGCCATCTGGACAGTTTTCAGACCTGAGAGGAGGAAAGGGCTTGTGTCTGGAGAAGGTGCCATGGGGGATGGGAGGTGGAGGAAGCCTGGGGCCAATCAGGATCTGGATCTAGCAGGGAACACCGAGGCCGGTGTTCTCGTCCCACCATGGGACTCAGCCTGAAGAAGACAAGGTGAATGAACGACCATTTCTCTCTAACTCAGTTGGCTAAGAGGACTGAGCTGGCGCCGAGGCTCTGGACACAAATGGGCCAGTTGACCCTGAGGTTTCTTTCTGGTAGTGGAGGTGGGGCTTCCTCTGGCTGACCCTGCTTAGGTCTCTGATGGAGGTAGCAGGGGCTCTGGTTCCCCCAAACTGGCCAAGTCCTCCACCATAGCACCCAAGGGGTCTGGGCAGAGTGCAGCTTCCCTCCCCTCCCCAGCTTGGCTTGGTGGGCACCTGCCTCCCCTGCCCTCCTGACCTTGATGGCTAATGCAGCCAGCCCCAGGCAGGCACAGTCACAGCCCTCAAACAACATGAGGCCCAACTCAAGACTCCTGGGTGGTGGTGGTCAAGGTGGGGGACTCTGTAGCCAGTAGAGCACTGTGGGGGCAAGAGACTGACTTGAAGGCTTGGAGCCTCACATGCCCGCCTAGTGGGGTGGTCCTGAGGGATATGACTTCTTTGGGCCTCTCTGCTCATTTTTGGAACCTGACCCGAGAAGGAGCCCATCCAAGACAATGTCCCGCCCTCAGGGAGGGTCTGGCAGTTTTTATCCCTAAAGGCTGGGATTCTCAGCGGAGCATCCTAGGCTGTAGTACCCACGACATCTTGCACACAAGAGGTGGAATCGCCTGTTGATGAAGAGCAAGGCTCTGGAATCTGTGATCTTGGGCCACTCACTTCACTTATCAATCCCTTCGCTTCCTTCTTGCCTGTTACATGGGGTCTGCAATCTACCCCTCAGGGGCGCTGACGAGCTCACATGAGCCTGTGACATAAAACACCTAGCACGGCCCTGGCGCAGTAAGAGCTCAGGAAACGGGCTGCTGCTGTGGTTACTGTGGACCCAGGCGGAAACAGAGCAGCCCCGCCCCTGCCGCAGGCATATAAAAGTGACCACTTGGCCGGTCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGTCAACATGATGAAACCCTGTCTCTATTAAAATACAAAAAATTAGCTGGGCGTAGTGGCAGGCGCCTGTAATCCCAGCCGCCCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAGGTGGAGGTTGCGGTGAGCTGAGATCGTACCATTGCACTCCAGCCTGGGCGACAGAGCCAAACTCCGTCTCGAAAAAAAAAAAAAAAGAAAAGGGACCACTCACTTTGGTCTGATTCTTCAGTTCTCATGGTCCTTTTACATCGGTCATTTCATTGCATTCTCCAACAGTGTCTGAGGGAGACTGGTGTCTCATTTTGCAGAGGTGAAAACTGAGGCTTGGCAAGATTAGGTAGCTTGTCCAAGGACACACAGCTGGTGCTTCCAGAGCGAGACCTGGCTTTCTGTACCCAAAGCTCTTGGGTAGTCTCTCCCATCCTGGGATCTTGAGGGTCACGGGAAGGAACTGGGTGGTTTGCAGTGGGACCCTTCACCTAGTGCCTTCTGACCTTGCAG
Seq C2 exon
ATAAAATACCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAGTGCCCCGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000002834:ENST00000318008:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.727 A=NA C2=1.000
Domain overlap (PFAM):
C1:
PF0088013=Nebulin=PD(37.9=30.6),PF0088013=Nebulin=PU(55.2=44.4)
A:
NA
C2:
PF0088013=Nebulin=PD(37.9=21.6)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development