HsaINT0187123 @ hg38
Intron Retention
Gene
ENSG00000197024 | ZNF398
Description
zinc finger protein 398 [Source:HGNC Symbol;Acc:HGNC:18373]
Coordinates
chr7:149153945-149166284:+
Coord C1 exon
chr7:149153945-149154340
Coord A exon
chr7:149154341-149166157
Coord C2 exon
chr7:149166158-149166284
Length
11817 bp
Sequences
Splice sites
5' ss Seq
AAGGTAATA
5' ss Score
8.49
3' ss Seq
CCATGTGATTGTAATTTTAGGTG
3' ss Score
6.96
Exon sequences
Seq C1 exon
ACATCTGAATGGGACTCCGAGTGCCTTACATCCCTGCAGCCCCTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGGACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAAGGTGGAGATCCACAGCCGGCGACTCCTACACCTGGAAGGTCGGACAGGGACAGCAGAGAAGAAACTAGCCAGCTGTGAAAAGACAGTTACCGAGCTTGGGAACCAGCTGGAGGGCAAGTGGGCCGTGCTGGGAACCCTGCTGCAGGAGTACGGGCTGCTGCAGAGGCGGCTGGAGAACTTGGAGAACCTGCTGCGCAACAGGAACTTCTGGATCCTGCGGCTCCCTCCAGGTATTAAGGGAGATATCCCAAAG
Seq A exon
GTAATACCTTCATTTCTAGATGTAAAGTGGTACCACTAGAACTTACATTAGTAGTAGTCTTGGTCATTCAGTTACTTAGATTTTTTATTTCCTTTTAAAGTTTCTTAAAATATCTCAGTCTGAAAGAATCATGAAGGTGTTTTATGTTTGTCTATTTGGGAAACATTTTATGTTCAATTTAGTACCCATTTAGAGTGCCAAGATTCAGATTGGAAACCTCTTGCTGGACCAAAGTTGGCTATCTGGTAGATGGATTTTTTTTCTCTTTTGGTTTCTCCTACCCATTACCCATGAGCCGCTTCTTTCTTCGTTAACTTGTGTGCCAGATTCTTGGGGAGGAGACTACATAAATATTCTTTTAAATCAGTCAATTTGAGGCTGGGCGCGGTGGCTCATCCCAGCACTTTGGGAGGCTGAGATGGGCAGATACCTGAGGTCAGGAGTTTGAGACCATCCTGGCCAACGTGAGGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGTGTGGTAGCACATGCCTATAATCCTAGCCACTCGGGAGGCTGAGGCTGGAGAATAGCTTGAACCCAGGAGTTGGAGGTTGCAGTGAGTCGAGATCATGCCACTGCATGCCAGGCTGGGCAACAAGAGCAAAACTCCTTCTAAAAAAAAAAAAAAAAGGCCTGGCGAGATGACTCACACCTGTAATCCCAGCATTTTGGGAGGCTGAGGCAGGTGGATCTCCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTTAAAATACAAAAATTGGCCAGGTGTGGTGGCTCACACCTGTAAACCCAGCACTTTGGGAGGCCGAGAAAGGCAGATCACAAGTTCAGGAGTTCAAGACTGGCCTGGCCAACAAGGCGAAACCCCATCTCTATTAAACATACAAAAATTAGCTGGGCTTGGTGGTGGGCGCCTTTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGACAGAGGTTGCAGTGAGCTGAGATTGCGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCGTCTCCAACAACGACAAAAAAGAAGAATCACCTGGTAGGCTTTTAAAATTTTGGTGAGCATCACATCCAGATTCTGACCTAATAGGTCCAGGATGGAGCTTAAGCATGAATAATTTTTTAAAAACCTCCATAGATGATTCTAATATATGACTAGGGTTGTGAATCACTGATGTGTAGGGCATTTAAGACCAAGGAAAGGAATTTGGATTTTTAACTAAGGTGTAATGAGGAGAAATTGGAGGGTTTGAAGCAGAGGAATTATATTTGGTTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGTCCGTCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCTCGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCGCGCCCGGCCAGTTTTATATATTGAAAGAATCCCTTTGGCTGCTTTGTGGAGGATGGATCGTAGGGGAAGAACTGAAGAAGGGAGGAAATACTAAGGCAGGGAGGGATGCAAGTGGCTTGGATGAGGGTAGCAGTTGTAGAGATGGAGAGAAGTGGACAGATGCAGGATGTTTGGTGGTAGAACTGACAATAAGAGTTACTGATGGGAAGGCAGGGTGCATTGGCTCACGCCTGTAATCCCACCACTTTGGGAGGTTGAGGCGGGCGGATCATGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGATGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCTGAGCGTGGTGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAAGTTGAGGGGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGACCAGGCAACAGGGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAGTTACTGATGGGAATTAGGAAATAAGGCATTAAGAACAGTAATTGTAGGCCAGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACCTGAGGTGAGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAATATACAAAAAAATTAGCTGGGCCTGGTGGCGCATACCCGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCGGAGATTGCGGTGAGGGGAGATTGTACCACTGAACTCCAGCCTGGGCAACAAGAGCGAAACTCCATTTCAAAAAAAAAAAAAAGAATAATTATAAATTTACTGTGTGGTAATTTAGTTAGAACTTACTATTCTAAGTGTTCTACTTATTTTAAGGCATATGAGTCTCAGAAGAACCCAACTTGCCCGAGGTCACATAGTTAATATAAATAACAAAGTTGTGTTTTAACTAGGTTGGCTCCAGAGCAGATGCTCTTAACCACGTTAGGTTTACTGTCTCAGGCTTTCGGCTTGAAGAACTGGGTAGATGGTGTTGGAGTTTCCTTGAGGGGAATACCTTGGGAAAGTGTGGCCTTGGGGGTGGGAGGAAATTAGGAGTTCCCCTTTGACAATGTTAGGTTTGAAATGCCTGTGATACTTTCAGGAGAGACGTTAAAAGTGGACTAAGAAAGTCCAGGACAGGGCGGGGCACGGTGGCTAATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGCGACCATCCTAGCTAACACGGCGAAACCCCGTCTCTACTAAAAAATATATAAAATTAGCCGGGCGTGGTGGCGAGCGTCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATGGCGCCACTGCACTCCAGCCTGGGCGACAGAGACTCCGTCTCAAAAAAAAAAAAAGAAAATCCAGGACCAGCAGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGTATCACGAGGTCAAGAGATCGAGACCATTGTGGCCAACATGGTGAAATCCCGTCTCTACTAAAAGTACAAAAATTAGCTGGGCGTGGTGGCGCTCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACTCGGGAGGCGGAGGTCGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGCGACAGAGTAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAGTCCAGGACCAAGTCCGGTGGTAGGAGGAGCCGGCAGAGGAGATTAAGAAGGAAAGGCTGGGCCAGCGCCGTGGCTCATGGTGGCAGGCGCCTGTAGTCCCTGCCTGTAGCTACTCGGGAGGCTGTGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGTAAGCCGAGATCGTGCCATTGCACTCCAGTCTGGGCAACAGAGCAAGACTCCGTCTCCAAAAAACGAATAAAAATAAAAATCAAAAAGAAGGAAAGGCTGATGAGGTAGAGGAAAAAACAAACAGGAAAGTATGTGGTGTCACAGGGCCAAGGAGAAAAAAAAAGCATCCCAAGTAGAGAGTTGTCATTTATGTTGAATATGTTACTGGGAGGTTTAGAAAGATGAGGACATTGAGTATGATTTGTCTGCATAGATGTCACTGGTGGCTTTTACAATAATTGCTTGTGTGGACTGGTGGGATAGAAGACTGAATGGAGCAGATTTTGAAGAGTGAATGCGAAGAGAAAAAATGGAAAGATGATCAACAACTTTTTCAGATTTTTCTGTGAAGTGGGGTGGAGATGAGGAAGTACCTGGGAAGGATATTGGAGCCGTTTCTCATAGAGAACCTTCTCCATAGTACATTTTGTTTGTGCATCTGGAGCTCCTCCAGAAGTTCCTTGGGATAATTTAAATTTAGTATTCATGGCCTGGCGTGGTATCTCACACCTGTAATCCCAGCACTTTGGGAGGCCTAGGCAGGCAGATCATCTGAGGTCAGGAGTTGGAGACCAGCCTGACCAACATGGTGAAACCCTGTCTCTACTGAAAATACAAAATTAGCTGGGCATGGTGGCGCATTCCTCTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCATGCCATTGCACTCCAGCCTGGGTGACAGAGCGAAACACCGTTTCAAAAAAAAAAAAAAAGAAAATTAGTATTTATTTTAAGAATAATAGTAAAGGTAAGTTAAAATTATTGTCTTATCTGGAATAAGTGGTTAACAGTTAAACTGTCCATCTTAGACTCTAAAATCATCTATAAAGTAATGTGATTTCCCTTAAAGATTTTTTTTTTTTGAGATGGAGTCTCCCTCTTGCTCAGGCTGCAGTGCAGTGGCGTGATCTCGGCTCACTGCAACTTCCACTTCCCGGGGTCAAACGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTACAGGTGTGTACCACCACGCCTGGTTAATTTTTGAATTTTTAGAGGAACTCTGACCTCAAGTGATGCACCTGCCCTGGTCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCTGGCCATCTCTTAAATATTTCTTAATGAAATTAAAATGCATTTGATTCTAGTCAAAATGTATTAAAGATTTACTAAATTGAAATATGAGAAACTTTTGTGTCCTTGCTTTGTTGAAAATGCTCTTTTTCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGTACTTTGGGAGGCTGAGGCAGGTGGATCATGAGGTCAAGAGATCGAGACCATCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCATGGTGGCGGGTGCCTGTAGTCCCAGCTACCCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGGTTGCAGTGAGCTGAGATCGCACCACTGCACTCCAGCCTGGGCTACAAAGTGAGACTCCGTCTCAAAAAAAATGCTCTTTTTCTGCTCTTAAATTTGAATGCCAAGTTCCAGGTCCAAAATAACTTTTCCTCAAAAAAAAAAAAAATTTTTTTTTTTGAGATGGAGTCTCACTCTGTCTCTGTTAGAAAGATGGAGTGCAGTGGCACAGTCTCCACTCACTTCAGCCTCCACCTCCCAGGCTCAAGCGATTCTCGTGTCTCAGTCCCGAGTAGCTGGGACTAAAAGCATGCACCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCCCCATGTTGGCCAGGCTTGTCTCGAACTCCTGACCTCAAGTGATCCTTCTTCCTCAGCCTCCCAAAGTTCTGGGACTACAGGTGTGAGTCACCGGGCCCAGCCAGTGTGAAACTTTGATACATTTGTATAAAGTGTAATGATAAAAGGAGGATAATTAGCTGATTAGCATATCTATCACCTGAAGCATTTATCATTTCTTTGTGTTGGGAACACCAAAAAAATCCTCTTTTCTAGGCCAGGCGCGGTGACTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTGACACGGGGGTCTCAACTAAAAATACAAAAAAGTAGCCAGATGTGGTGGTGGGGGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCTGAGAGTATAGACCAGTTTATACTAGGAAGTGGGATTCTCTTCTGCATATGGCCATTCCCTACATGCAGTCTTAACCCCAGTGAGGCAGAATTCACAGTCCTCCTCTGAATGCACTCTTCAGTTTCCTTCACTTGAATGTTTTCTCCATTCCCATTAGGACTAGCCAAAGTCACATCTCTTTTTGAGTCATGCCAGCCCCATGTCTTGTCCATGTCATTCATTTGCAGATAGTCATATTCCCCTTTGGGGCAGAAACCATATTTTAGTTATCTCAATGCTTAGGGAAAACCTTGTATGTAGTGGATACTCAGAATATTTTCTTGTGTGAATTAAGTATGCTTTGCATTTGTATCTAACTCTGAGTAACTCTGAGTCCTCCACCCTCCAGAAGCTCACAGCTTTAGATTATCACCTTTCTTCTTGAAATCATTGTGAACTCCTAGAGATTGGTCTGTGCCTTATTTTTCCTGTATCCTTTCAGTACCCCATATAGTTTTCTCAGTCAGGAGGCACTTAGTAAACAGTAAAGATTTTTAGACTGAGGGGGCTAGAGTGGGGGCGGGCTGCTGGCTGAGGTGGTGTCTCTGCTCTGCACCCCAAGGAGGCCTGTCAGGAGGAGGTGGGCTTTCCCCAACGCTGCCCTCTTGACCCTTGGAGCTCTCCCAGGATTCCTCAGATTTCCCCAGCGCCCCTTTGGCACTGTGTCTCCTCCTCTTTGCCCTGCCTTCTCCCTGTCCCACCACCACCTCCTCACCCTGTCTATCCCTCCTCCTCTTTGCTCTGGCTCCTTGCCACCAGGATCTTTTCCTAACTTTTTTCTTTCCTAGTAGAGACAATGGGCTGACAACCTGACTTCCAAAAAATATTGAGGAAAGGCAAAAACTAGTTTTTAGGCCAGGTGTGGTGACTCAAGCCTGTAATTCCAGGGCTTTGGGAGGCTGAGGTTGGAGGATTGCTTGAGGCCAGGTGTAGGACACCAGCCTGGGCAACATAGCCAGACCCATCCCTACAAAAATTATGTTTCTAAAGATTGACTCGCCATAGTGGCATGTCACTTCCTGACTCGTCCCAGCTACTCAGGAAGCTGAAATCGGAGGATGACCTGAGCTCAGGAGGTCGAGGCTATAGTGAGCAATGATCACATCACTGCACCCCAGTTTGGATGACAGAGTGAGACCCTGTCTTAAAAACAAGCAAAACAAAACAAAACCAAAACCAAAAACAACTAGTTACCAGATTCTGAATGCCTAACATACAAGCATACAAGGTGGCAGGATGAGTACATAAAGTCGCAAAAAGTACTCAAGTGCCTATTAAATGAAAAGCAAACATACCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGGGAATTAGTAGAAAAGCTAAGGACTTAGAAGAAATGAAGCTGCAGGTAATTAACTCCAAAAAAAAAAAAAAAGGGGAATTGTTAAAAGCCCAAATACAGCAAGAATTAGAAACTCCAGTGTTTTTGCAATTGGGATGAAGAAGTGGAAAAGTATAGAGCTGCAAGCTTTGCTATAAACATACATTTCTTAAATAGAATCTGAAACACTAGGAAGAAGAATTTACATGTAGTTTAGAAAAAAACTCTAAAATTTGAATTAGAGATTTATTTTTATTTTTACTTATTTATATATTTTTCAAGACAGGGTCTTGCTCTCGCCTGGGCTGGAGTGCAGTGGTGCTATCTTGGCTCACTGCAGCCTTAAGGCTCAAGTGAGACTCTTGACTCAGCCTCCCGAGTGGCTGGGACTACAGGTGTGCATTACCACAGCTGGTTAATTTTTTTTTTTGAGTCGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAGTCTCGGCTCACTGTAACCTTCGCCTCCTGGGTTCACGCCATTCTCCTGCCGCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTTTATATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGACACTGTGCCTGGCCCCACAGCTGGCTAATTTTTAAATTTCTTTATACAGACAGGATCTCACTATGTTGTCCAGGCTGGTTTCGAACTCCTAACCTCAAGTGATGCTCCTGCCTTGGCCTCCCAAAGTGCTGAGATTACAGGCATGAGCCAGTGCACCTGGCCTGAATTATAGATTGCAAGACTGGGGAAAGATGTAGAACTATATAACCAGCTGCTTAGTGTTGATCCCACAAGAGGCAACAAATGAGTAGAGGAACTTGTTTGAGAAAAAGTCCATTTGTTTCAGAAATTAAAATAATTCATAGGCTGGCTGGGCACAGTGGTTCACGCCTGTACTCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCGCCTGAGGTCAGGAGTTTGAGACTAGCCTGGCCAACATGGCAAACCCCTGGGTGGGGGGAGGGGGGCGGCGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCCAGCCTGGGCAACAGAGCGAGAGTCTGTCTCAAAAAATATATATATATTCATTCAGAGGCTGAAGTAGCAGATTTAACGGCTGAAAAAGAGAATTCTGGTGCTCAGTTAGAAAACGTCCTAAGAATACAGGTGTGACAGTTGGCTGAGATGCAGTTACAGTCAGGTCCCAGTAGGCCAAAAATGTCACGTAAACTGTAGGTTAAATGCTCGGAAAAAGAGCCACAATCAAACAATGAACAAAATACCTGTTTTGTTTGTTTGTTTGTTTGTTTTTTTCAGACAGAGTTTCACTCCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGGAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTTGAGTAGCTGGGATTACAGGCATGCGCCATCATGCCCAGCTAATTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCCCTTGTCGTGCAGGCTGAAGTACAATGGTGTGATCTCGGCTCACCGCAACCTCCGCCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAGGTAGTTGGGACTACAGGCCTGTGCCACCACGCCCCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATATTGGTCAGGCTGGTCTTGAACTCCCGACCTCAGGTGAGCCACCGCGCCCGGCCAAGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACAGGGTTTCGCCATGTTGGTCAGGCTGGCCTCAAACTGCTGACCTTGGGTGATCCACCCGCCTTGGCCTTCCAAAGTTCTAGGAGCCACTGCGCCTGGCCAAAGTACCTTTTTAATCATTAAAGATTACATAAAACTGAACAAGAAAGAAATACCCTGACCAGGCTGGGAGTGGTGGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTAGGTGAATCATTTGAGGTCAGGAGTCGAGCCCCACCTGACCAATATGGTGAAACCCCGTGTCTACTAAAAATACAAAAATGAGCCAGGCGTGATGGTGTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGCTTGAACCCAGGAGACAGAGGTTGCAGTGAGCCGAGATAGCGTCACTGCACTCCAGCCTGGGTGATGGAGCAAGACTCCATCTTAAAAAAAGAAAGAGGGCCGGGCGCAGTGGCTTGAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGGGCGTGAACCCGGGAGGCAGAGCTTTCAGTGAGCCAAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAATAAAAATAAAAATAAAAAAAGAGAAAGAAAGAAATACACTGAGCACTAAAGTCAAAGAACGAAACTTTCAAGCATACTAGAAATAACAGCCATGAAACTAGAGGCAGCAAGAGTGAGCTAGAAAGGGAAAGGAAAAAGATTCAAAGTGAACTGGATGGTTTACTGTCAGACAATGAAATTCTGAGACCAGCTATTGAACACCACAAAGTGCCCTTAGTAAAAAAAGATCATATATTAATATGTAAGGCACCAGATGCCAAGGAAGAAGGTTGTAAAAGACTTCTGGCATTACAGGATGAAAAGCTAGAATTTGAAAACAAGTTAGCAGATAGAAAATGAAAGTGGATCATGATGTCTGCAAGCAATGTGAAAAGCATCAGTGTGAAAAGAAATTGTGGGAGGCCGGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAACTCGAGACCAGCCTGACCAACGTGGTGAAACCCCATTTCTACTAAAAATACAAGAATTAGCGGTGTGTGGTGGCGGGTGCCCGTAATCCTGGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAGGCAGAGGTTGCAGTGAGACGAGATCGCGCCACTGCACTCCAGCCTGGGTGTACAGCGAGACTCTGTCTCTAAAAAAAAAAAAGAAAAGAAAGAAAGAAAATGCAGAGGAAGAAAAAAACGAAAATTTTGACCTGGAATAGTAAATCAGTAGTTTTCAGATCCAAGTTACCTCACTTGCAGAGTTCGAACCGAATGCTGAAAGAAACGATGGAGACATTAAAACAGGAATGCTGAAATATAAGAAATCAAGCTGAGAAAGTCTAACTAGAAGTCAAAAAGACATTGGAAAAAGAACAGACACAGCAGTTAGAAGAAAAGCATATGCTTCATGAATGTATCTCAGGGAAATGTACAGTCAAGCTAAAGAGAAATTGCAGTGAGCTGCAGTTGCCCAGAAAAACAGGAAATCTTGCCGTGAAAACAATTGAAGAGATGGCAGGACAAGGTGTAAATCTTGGAGGCAGGTAGAGAAGAAATGGAAACAGAAAATTGGGTTTTAAATAGACAAAATGTTCCATTTGAAGAATGTACAAAGCTTCAGAAAAGACTAAAGGATACACACAGAAGACATAATGAATTTTGAAGTTTAATTTTGGTTCCTAACATGCCTCCAAAATCAATCCTGTTTGCTCTCAGTCATCAGCCATGGTATTATCCTTTCCTCCTCATGTGCACGATGAACAGCATCAAAGGGAACTCTGTACTTGGCAAAAGACTAGAGGAACTAGAAACAACACAAAGAAAACAAATAGAGGAATTTGGATCTCCTGGAGAGTGATGTTCTTAGAGAAAAGGCATTTTAAAAGAGGTGAAATCAAAGACTCAATAAAGCTTGAAGTTTTAACATACATGGTATTTAGATATTTTATTACTGCTTACCAAAATACTCGAATGTGCCTCAAGAAAAGGTACCAGCTTTATTTAAGGGACTCGTGCTGTATTGCATGAGTACTAGGATTTTAGGATTTTCTAATGACAAGTGAAGCATTAAAAGAAACCATTTCAGAGATATTTAGAATATTTATTGACCACCCTTTGAAAATGTAAAAAAAATAAAAGGAACTAATTGGAAAGAGATTTATTGAATGACTGAATTATAATGGAAGGGACTAACCCATGTGATTGTAATTTTAG
Seq C2 exon
GTGCCTGTGGCATTTGATGATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAAAATTAGAAGAATGGCAAAAGGAACTTTACAAGAATATCATGAAGGGCAACTACGAGTCTCTCATCTCCATGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000197024:ENST00000426851:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.129 A=NA C2=0.152
Domain overlap (PFAM):
C1:
PF124173=DUF3669=WD(100=60.6)
A:
NA
C2:
PF0135222=KRAB=WD(100=95.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains