HsaINT0188399 @ hg38

Intron Retention

Gene

ENSG00000197362 | ZNF786

Description

zinc finger protein 786 [Source:HGNC Symbol;Acc:HGNC:21806]

Coordinates

chr7:149069963-149074538:-

Coord C1 exon

chr7:149074386-149074538

Coord A exon

chr7:149072474-149074385

Coord C2 exon

chr7:149069963-149072473

Length

1912 bp

Sequences

Splice sites

5' ss Seq

GGGGTGAGT

5' ss Score

7.93

3' ss Seq

ATTTTTGTTTTCAATTGCAGGAA

3' ss Score

11.6

Exon sequences

Seq C1 exon

ATGATGGACTTCCAAAACCAGAACTAATATCCTGGATTGAACACGGGGGAGAGCCCTTCAGGAAATGGAGAGAATCACAGAAATCAGGAAACATAATTTGCTCCTCTGTTGATATGCATTTTGATCCAGGTTTTGAGGAACAGCTGTTTTGGG

Seq A exon

GTGAGTATTAAGAAATCAGGGCCCCGACCTTGAGACATCATGTTCAGATTTGTTTCTCTTCTCTGATCTTGTCATCCTGTTTGGGCAAGCTGAGGTTTGAAGACTCTTATCTTCTAGATAAAGGCAGTAAAGCATAATGGTTAGGAATGTGGGTTCTAGAGTCTGTGTCTGGATCTTGCTTTTTCTTGGTGACCTTGGGCAAGTTATTGAACCTTTTGGTATTTCAATGCCTGATCTATAAAATGAAAGTACCCATGTTAACAGGATTGAATTGGTTAATATATATAGTGTTAGGCCAGGCATGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGTGGCCGAGGCGGGCAGATCACTTGAGGTCAGAAGTTCCAGACCAGCCTGGCCAACATGGTGAAACCCTTACTCTACTAAAAATACAAAAAAATTAGCCGGGCATGGTGGCAGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGGAGAAGAATTGCTTGAACCTGGGAGGCAGAGCTTGCAGTGAATGAGCTGAGATTATGCAACTGCACTCCAGCCTGGGCGATGGAGCAAGTCTCAGTCTCAAAAAAAAAACTATATATATATACATATATATATATATATATATATATATATATATACACACACACACACACACACACACGCACACATATACACACACACGTGTATATACATATGTATATAAATGTATACATAAATATATGTGTATATATGTATACATATATATGTGTATATATATTGAGAGACAGTTTATATAGTAAGAACTCAGTAGAAACTGGTTATCCAGTTTGTTTGGTTTTTAAGACACAGGATCTTGCTCTGTCACCCAGGCTGGAGCACAGTAGCATGATCATAGCTCACTGCAGTCTTGAACTCCTGGCTTCCAGCAGTCCTGGCCTCAAGCAGTCCTCCCACCTCAGCCTCCCAAAGTGTTGGGATTATAGGTGTGAGCCACCATGCCTGGCCCATGGTTATCCAGATCTTCATGACTAACGTGGCTTCCTTCCTAACTAGAGACTGTTGTCTACTTGAATACTTCAACCTGAGCTCCTCTCTTTCATTTCTTGTCATGAGGAGAGAGTCTGAGATTTTTGGATTCTTAAAGTACAGAATGAAAAAGTCAAACAGGAGCATCATTTCAAGAAATCTTGTCAAATAGTTTTTGTTTTTAGGTGCTTCTTTCGAAAGTGAAGGTTTTTCCCCCACAAATTACTTAACTTTCTACCATCTATTAATTATTCCAAGAAACCTTCTTGAAACATTGGCAGAAATGGGGGCAGGGAGGGAGGAATAGGCCCAAGCCTTGCTGCCAGGTCTTAGAGACAGGATGGCTCAAGGATCACGTATAACTGTGGTATTGGTCAGGGCTCCAGCTCGGGACTCCAGGTGTGTCTGTACATCAGAATGCGATACACTGGCTTTCCTGAAGTCATGAGAACAGCCAACACTTAAACAGAGTACATGCACTATGCCAGGCACCATGCTAAGCACCTCATGCACATTAGCTCATTTAATTCTCACAGTAATCTTATGTACTTTTGTTTCCATGTTTTTACAGAAGGAGCTGAAGTCAAAAGAGATTAGCTTGACAAAGGTTACACAGTGGACAGATAGGATTCAAAACTAGGCAGACTGATTCCAGAGCTTACACTCTATATTTGCGACCTATATTTTCCTTTTTTCAATATTATCCAAAGATATGTCTGTTCAGTTTAGTTTCAGCAGACTCACCAAACTCACGGCCATGAGACAGATCACACTGCATGGTTGGGTAGCTCAGTGGAAGCTGGGTTCCCAGGCCACCACAAGGCACTCTTGTGGGTCACTTGACTGTGAGAATCGCTAGTAGTGCTGCAGACAGGAATACCGACTGAATTTTTGTTTTCAATTGCAG

Seq C2 exon

GAAGCCAGCAGGCTATGAATTCAGGAAAAACTAAAAGCCATTTCCAATTAGATCCTGAAAGCCAGTGTTCCTTTGGATCCTTTGTTTCCTTCAGGCCTGACCAAGGCATCACCCTCGGGAGCCCACAGAGACACGACGCCAGGGCTCCTCCACCACTAGCCTGCGGCCCCAGTGAATCTACCCTAAAAGAAGGAATCCCAGGTCCCAGAAATCTGGATCTTCCTGGTTTGTGGGACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGACGCAGATGCCGTGGAGCAGCCCTCGGGTACAGAGGCACTTCCGGTGTGGCGTGTGCGGTAAGAGCTTCCGCCGGAAGCTGTGTCTGCTGCGCCATCTGGCGGCCCACACGGGGAGGGGCCCCTTCCGGAACGCTGACGGTGAAATGTGCTTCCGACACGAGCTGACCCATCCCAGCCACCGCCTCCCGCAGCAGGGGGAGAAGCCTGCCCAGTGCACCCCATGCGGCAAGCGCTCCCTCCCAGTGGACAGCACGCAGGCTCGCCGGTGCCAGCACAGCCGGGAGGGGCCGGCCTCTTGGAGAGAAGGCCGCGGGGCCTCCAGCAGTGTGCACTCGGGACAGAAACCAGGCTCGCGCCTGCCCCAGGAGGGGAACAGCCACCAGGAAGGGGACACGGAGGCGCTGCAGCATGGCGCAGAGGGGCCCTGCTCCTGCTCGGAGTGTGGCGAGCGCTCCCCTATGAGCGCCAGGCTCGCCAGCCCCTGCAGGGCGCATACTGGAGAAAAGCCCTTCCAGTGTGCGCATTGCACCAAGCGCTTCCGCCTGCGCCGCCTGCTGCAGGTCCACCAGCACGCGCACGGTGGGGAGAGACCGTTCTCCTGCAGGAAGTGTGGCAAGGGCTTCGCCAAGCAGTGTAAACTCACGGAGCACATTCGAGTCCACAGCGGAGAGAAGCCTTTCCGGTGTGCCAAGTGTGGCAGGAACTTCCGTCAGAGGGGACAGCTGCTGCGGCACCAGCGGCTGCACACGGACGAGAAGCCCTTTCAGTGCCCAGAGTGTGGGCTGAGCTTCCGCCTGGAGAGCATGCTGAGAGCCCACCGGCTCCGGCACGGTGGGGAGAGGCCGTTCTCCTGTAGCGAGTGTGGCAGAGGCTTCACCCACCAGTGCAAGCTCCGTGAGCACCTGAGAGTGCACAGCGGGGAGAGGCCCTTCCAGTGCCTGAAGTGCGACAAGCGCTTCCGCCTGAAGGGCATCCTGAAGGCCCACCAGCACACGCACAGCAAGGAGAGGCCGTTCTCGTGCGGGGAGTGTGGCAAGGGCTTCACCAGACAATCCAAGCTCACGGAGCACTTGCGCGTGCACAGCGGGGAGAGACCCTTCCAGTGCCCAGAGTGCAACAGGAGCTTCCGCCTGAAGGGGCAGCTGCTCAGCCATCAGCGCCTGCACACGGGAGAGAGGCCCTTCCAGTGTCCGGAGTGCGACAAGCGCTATCGCGTGAAGGCCGACATGAAGGCCCACCAGCTGCTGCACAGCGGGGAGATGCCTTTCTCCTGTGAGTGCGGCAAGGGCTTTGTGAAACACTCAAAGCTCATCGAGCACATCAGAACGCACACGGGAGAGAAGCCTTTTCAGTGTCCCAAGTGTGACAAGAGTTTCCGCCTGAAGGCGCAGCTGCTCAGCCATCAGGGCCTGCACACAGGGGAGAGGCCTTTTCACTGCCCTGAGTGTGACAAGAACTTCCGGGAAAGGGGACACATGCTGAGGCACCAGCGCATCCACAGGCCCGAGAGGCCCTTTGCCTGTGGCGATTGTGGGAAGGGCTTCATTTACAAGTCTAAGCTTGCGGAGCACATCAGAGTACACACAAAATCCTGTCCTGCTCCAAATGAACTGGACATTAAGAAAAGGCTCAGCCAACTGTTTGCAATGATAGAGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGACGGGTTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAGAACCACAAAGGATTTTCTCTTCAGAAGCATCACCAATTATATTTCTTTCTTTTTTTTTTTTTTTTCCAAGATGGAGTTTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAATTTTATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGATTGTTAACATTTTTAAGAAAAGGTGCACACAGAAATCCAGATAAGATGTGATTACCTTTGTGCATTTGTATAAAAATATATGTGTGTAATTATAAGGAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197362:ENST00000491431:3

Average complexity

IR

Mappability confidence:

NA

Protein Impact

Alternative protein isoforms

No structure available

Features

Disorder rate (Iupred):

C1=0.030 A=NA C2=0.269

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NA

C2:

PF138941=zf-C2H2_4=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8)

Main Inclusion Isoform:

NA

Main Skipping Isoform:

ENSP00000417470