MmuEX0014892 @ mm9

Exon Skipping

Gene

ENSMUSG00000030409 | Dmpk

Description

dystrophia myotonica-protein kinase [Source:MGI Symbol;Acc:MGI:94906]

Coordinates

chr7:19677288-19679170:+

Coord C1 exon

chr7:19677288-19677385

Coord A exon

chr7:19677557-19677603

Coord C2 exon

chr7:19678299-19679170

Length

47 bp

Sequences

Splice sites

3' ss Seq

CCTCTCTCTTCTCCTTCCAGCCA

3' ss Score

10.88

5' ss Seq

CATGTAAGA

5' ss Score

5.58

Exon sequences

Seq C1 exon

CCAACTACAGGAGGCCGAGGTCCGAAACCGAGACCTGGAGGCGCATGTTCGGCAGCTACAGGAACGGATGGAGATGCTGCAGGCCCCAGGAGCCGCAG

Seq A exon

CCATCACGGGGGTCCCCAGTCCCCGGGCCACGGATCCACCTTCCCAT

Seq C2 exon

ATCCCTAGGCCTGGCCTATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCGCCACACTGGGCTGCACTGGGTTGGTGGCCTATACCGGCGGTCTCACCCCAGTCTGGTGTTTCCCGGGAGCCACCTTCGCCCCCTGAACCCTAAGACTCCAAGCCATCTTTCATTTAGGCCTCCTAGGAAGGTCGAGCGACCAGGGAGCGACCCAAAGCGTCTCTGTGCCCATCGCGCCCCCCCCCCCCCCCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAGCCCCGACGTGGATGGGCAAACTGCTCAGCTCATCCGATTTCACTTTTTCACTCTCCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000030409_MULTIEX1-1/2=C1-C2

Average complexity

C3

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.897 A=1.000 C2=0.017

Domain overlap (PFAM):

C1:

PF104814=CENP-F_N=PD(19.6=55.9),PF041569=IncA=FE(26.4=100),PF0003816=Filament=PD(41.6=94.1),PF088265=DMPK_coil=PD(47.5=85.3),PF139491=ALIX_LYPXL_bnd=FE(34.7=100)

A:

PF041569=IncA=PD(1.6=12.5),PF139491=ALIX_LYPXL_bnd=FE(15.8=100)

C2:

NO

Main Inclusion Isoform:

ENSMUSP00000032568