MmuEX0053062 @ mm9

Exon Skipping

Gene

ENSMUSG00000057101 | Zfp180

Description

zinc finger protein 180 [Source:MGI Symbol;Acc:MGI:1923701]

Coordinates

chr7:24882840-24892717:+

Coord C1 exon

chr7:24882840-24882914

Coord A exon

chr7:24886467-24886587

Coord C2 exon

chr7:24889424-24892717

Length

121 bp

Sequences

Splice sites

3' ss Seq

GAATGTGTGTGCTGTTGTAGGAA

3' ss Score

7.75

5' ss Seq

GGGGTGAGT

5' ss Score

7.93

Exon sequences

Seq C1 exon

AACTTTGTTCTACCCCAAGAGATGATCATTGAAGTGGAGGGAGAAGATGCTGGGTCACTGGACATCATGCCTCAG

Seq A exon

GAAAGCACAGACTTCAAGATTGTAACTGTGGACCTTACAGAGGAGGGACAGAGCATGTGGAACAATGCCCAGAGAACCCCAGAGAAAACCGTGATCCTGGAAGGCCACAGGGACCTGTGGG

Seq C2 exon

ACTTGCCAGCTGTACATGGAACAGAAGGAGCCACCGCAAAGCAGACAATCTTCAATGAAGAACCATCCCATGGATTGAAGCTAGAGGGGTCGGCAAGAGATGACCCTTGGCTGTCAACATGTGAAGAAGTCCGAGACTGTAAGGAGCAGTCGGGGAAACAACCGAACAAGCAAGAGGAGGTGGCCTTTACCCAGGGTAGCGCTGGCTCTCCTGATACTGTCTACAGGGGTCATGACCCTGACAGGAGTTGCCTGAGTACCAGCCGGCCTTCATTCCCCATGATACCCCTCAGAAACCATTTCCATAAACAGGCGTCACATGTTAAAAAGTTGCATGGTGATGTCGTTGCAAGCAGTCACCAAAAGATCAGTGATAGCTCAGATCTCCTTGAAGATGACACAGCTGGGGCAGTTCCTCAGAGCATCCGCCCCTCTCAGTTCGTAAGCAGCCCACAAGGAGAGGAAGCCTATGAACTTAATGGCCATGTTCAAGCTTCTGGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000057101_MULTIEX1-4/4=3-C2

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.394 A=0.707 C2=0.344

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=PU(94.9=90.2)

C2:

PF0135222=KRAB=PD(2.6=0.2),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.5)

Main Inclusion Isoform:

ENSMUSP00000064611