MmuEX0053531 @ mm10
Exon Skipping
Gene
ENSMUSG00000013419 | Zfp651
Description
zinc finger protein 651 [Source:MGI Symbol;Acc:MGI:2670992]
Coordinates
chr9:121765483-121766582:+
Coord C1 exon
chr9:121765483-121765630
Coord A exon
chr9:121765945-121766039
Coord C2 exon
chr9:121766467-121766582
Length
95 bp
Sequences
Splice sites
3' ss Seq
TCACCTTTCGGCCCTCACAGGGC
3' ss Score
9.28
5' ss Seq
CAGGCAAGG
5' ss Score
3.33
Exon sequences
Seq C1 exon
TGCATGACATGTGGCAAAGCCTTCAAGAAACTGTGGTCTCTTCATGAGCACAACAAGATAGTGCACGGCTACGCGGAGAAGAAGTTCTCCTGTGAGATCTGCGAGAAGAAGTTTCACACCATGGCGCACGTGCGCAAGCACATGGTTG
Seq A exon
GGCTTGAGGCATCGCCTGAGTGCAACCTCCCCCAGGGGTCAGACCTGGACACAGTAAGGAGGCCTCCCCAAGTGTGCTACCCACCCCACTTACAG
Seq C2 exon
CCCACACCAAGGACATGCCCTTCACCTGTGAGACCTGTGGGAAGTCCTTCAAGCGCAGTATGTCGCTGAAGGTCCACTCGCTGCAGCACTCGGGGGAGAAACCTTTCCGCTGTGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000013419_MULTIEX1-1/2=C1-2
Average complexity
S*
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.130 C2=0.190
Domain overlap (PFAM):
C1:
PF134651=zf-H2C2_2=PU(26.9=14.0)
A:
NO
C2:
PF134651=zf-H2C2_2=PD(69.2=46.2),PF134651=zf-H2C2_2=PU(65.4=43.6)
Main Inclusion Isoform:
ENSMUST00000093772fB4698
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CAAGATAGTGCACGGCTACGC
R:
GGACCTTCAGCGACATACTGC
Band lengths:
170-265
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types