MmuEX6006853 @ mm9

Exon Skipping

Gene

ENSMUSG00000008845 | Cd163

Description

CD163 antigen [Source:MGI Symbol;Acc:MGI:2135946]

Coordinates

chr6:124262439-124268043:+

Coord C1 exon

chr6:124262439-124262759

Coord A exon

chr6:124267320-124267634

Coord C2 exon

chr6:124267729-124268043

Length

315 bp

Sequences

Splice sites

3' ss Seq

GAAATATTATTATTTTTCAGGCC

3' ss Score

8.29

5' ss Seq

CACGTAAGA

5' ss Score

7.45

Exon sequences

Seq C1 exon

ATGGAGCAGATCTGGAACTTAGACTTGTAGGTGGAGGCAGTCGCTGTGCTGGCATTGTGGAGGTGGAGATTCAGAAGCTGACTGGGAAGATGTGTAGCCGAGGCTGGACACTGGCAGATGCGGATGTGGTTTGCAGACAGCTTGGATGTGGATCTGCGCTTCAAACCCAGGCTAAGATCTACTCTAAAACTGGGGCAACAAATACGTGGCTCTTTCCTGGATCTTGTAATGGAAATGAAACTACTTTTTGGCAATGCAAAAACTGGCAGTGGGGCGGCCTTTCCTGTGATAATTTCGAAGAAGCCAAAGTTACCTGCTCAG

Seq A exon

GCCACAGGGAACCCAGACTGGTTGGAGGAGAAATCCCATGCTCTGGTCGTGTGGAAGTGAAACACGGAGACGTGTGGGGCTCCGTCTGTGATTTTGACTTGTCTCTGGAAGCTGCCAGTGTGGTGTGCAGGGAATTACAATGTGGAACAGTCGTCTCTATCCTAGGGGGAGCACATTTTGGAGAAGGAAGTGGACAGATCTGGGGTGAAGAATTCCAGTGTAGTGGGGATGAGTCCCATCTTTCACTATGCTCAGTGGCGCCCCCGCTAGACAGAACTTGTACCCACAGCAGGGATGTCAGCGTAGTCTGCTCAC

Seq C2 exon

GATACATAGATATTCGTCTGGCAGGCGGCGAGTCCTCCTGTGAGGGAAGAGTGGAGCTCAAGACACTCGGAGCCTGGGGTCCCCTCTGCAGTTCTCATTGGGACATGGAAGATGCTCATGTCTTATGTCAGCAGCTGAAGTGTGGGGTTGCCCAATCTATTCCAGAAGGAGCACATTTTGGGAAAGGAGCTGGTCAGGTCTGGAGTCACATGTTCCACTGCACTGGAACTGAGGAACATATAGGAGATTGCCTCATGACTGCTCTGGGTGCGCCGACGTGTTCCGAAGGACAGGTGGCCTCTGTCATCTGCTCAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000008845-'5-6,'5-5,6-6=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features