MmuEX6040479 @ mm9

Exon Skipping

Gene

ENSMUSG00000021904 | Sema3g

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G [Source:MGI Symbol;Acc:MGI:3041242]

Coordinates

chr14:32039105-32043536:+

Coord C1 exon

chr14:32039105-32039339

Coord A exon

chr14:32039572-32039705

Coord C2 exon

chr14:32040928-32043536

Length

134 bp

Sequences

Splice sites

3' ss Seq

TGGCCTGATCCTCTCTACAGAAG

3' ss Score

8.34

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

CAAACGCTGTATGTGGGCTCTCCACTGGGTGTGGCCCGGCTGCAGCTGCACCAGTGTGAGACTTACGGCAGTGCCTGTGCTGAGTGCTGCCTGGCCCGGGACCCATACTGTGCTTGGGATGGCACTGCCTGTGCCCGCTACCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTCGGCAGGACATACGCCATGGCAACCCTGCTGTGCAGTGTCTGGGCCAGGGCCAGAGCCAAAACA

Seq A exon

AAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGGCACAGAGCACAACAGCACCTTCCTTGAGTGCCTGCCCAAGTCTCCTCAGGCTGCAGTGCGCTGGTTCTTACAAAGGCCAGGGGATAAGGGGACTGACCAG

Seq C2 exon

GTGAAGACAGATGAGAGAGTTGTGCAGACGGCCCAAGGGCTGCTGTTCCGAAGGCTCAGCCGCCATGACGCAGGAAACTACACTTGCACCACTCTGGAACATGGCTTCTCCCAGACCGTGGTCCGTTTTGCCCTGGAGGTGATTGCAGCTGTGCAACTGGACAGCCTGTTCCTTCGGGAGTCAAGGCTAGAGGAGCCCTCAGCCTGGGGAAGCCTGGCCTCTGCCTCCCCCAAGACTTGGTATAAGGACATCCTTCAGCTCACGGGCTTCGCCAACCTGCCCCGTGTGGATGAGTACTGTGAACGTGTATGGTGCAGGGGTGTCGGGGAGCGCTCAGGCTCCTTCCGCGGAAAGGGAAAGCAAGCGAAGGGCAAGAGCTGGGCAGGGCTGGAACTGGGCAAGAAGATGAAGAGCAGGGTGCTGGCTGAGCACAATCGGACACCCCGGGAGGTAGAAGCCACATAGAAGATGACTGAGGAGCAGGTGGTCGGGCTGGGCTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000021904-'14-14,'14-13,15-14=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features