MmuEX6044391 @ mm9

Exon Skipping

Gene

ENSMUSG00000073176 | Zfp449

Description

zinc finger protein 449 [Source:MGI Symbol;Acc:MGI:1925869]

Coordinates

chrX:53606640-53618851:+

Coord C1 exon

chrX:53606640-53606844

Coord A exon

chrX:53615644-53615757

Coord C2 exon

chrX:53615919-53618851

Length

114 bp

Sequences

Splice sites

3' ss Seq

CCCTTTGCTTCCATGACCAGGTT

3' ss Score

9.15

5' ss Seq

TTGGTAAGT

5' ss Score

10.47

Exon sequences

Seq C1 exon

ATTGACATGGATGACATGCTCTTGGAAGAACTGGCGCCAGTTGGAACAGTACCCATGCCACCCAACTTGCACCTGGAGGAGCCTTCACTCCAGGTGATGGAACCTGTTCAGGAGCCTCCGGTGCCGGATGCCTGGATTCCACAAGCTGGCCCCCAGGATCTGAACTACAGTGCTGATGCTGAATGCCAGTCCTTTCTGGACCCTG

Seq A exon

GTTATCAGTTACCAAAGCTTGACATGAACTTCCCATTGGATCATAGAGAAGAACCATGGGTAAAAGACTTAGAGGATCCCAAAGAAATGAAACAATTACTTGATTCCAAGATTG

Seq C2 exon

GTTTTGAGATGGGAATAGAAAATGAAGAAGATACTTCAAAGGAAAAAAAACTGGAAACTTTGTACCCATTTGTTGTAACTTTAGAAGGGAATGCTCTCCATGGTCCCATTTTGCAGAAAGACTATGTGCAGTTAGAAAACCAATGGGAAACATCCCCAGAGGACTTACAGACAGACCTAACAAAACTCGTAGATCCTCAGAACCCAACTCTAGGAGAGACACCCGAGAGCCCCAGCCTGGAAGAACCTCTCACCCCGAAGCCTCCAAAGAAAAAGAGTCCTGGGGACAAACCTCACCGATGTCCCCAGTGTGGCAAATGTTTCGCTCGGAAGTCACAACTTACAGGGCACCAGCGAATTCATTCAGGAGAAGAACCTCACAAGTGCCCTGAATGCGGAAAAAGGTTCCTGCGTAGCTCTGACCTTTACAGACACCAACGACTTCACACAGGAGAAAGACCCTATGAATGCACTGTATGTAAAAAGCGATTCACTAGGCGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000073176-'2-3,'2-2,3-3=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.652 A=0.718 C2=0.327

Domain overlap (PFAM):

C1:

PF0202312=SCAN=PD(0.1=0.0)

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=8.8),PF134651=zf-H2C2_2=WD(100=8.8),PF134651=zf-H2C2_2=WD(100=8.1),PF134651=zf-H2C2_2=WD(100=8.8),PF134651=zf-H2C2_2=WD(100=8.8),PF134651=zf-H2C2_2=WD(100=8.8)

Main Inclusion Isoform:

ENSMUSP00000099096