MmuEX6056875 @ mm9

Exon Skipping

Gene

ENSMUSG00000052414 | Atf7

Description

activating transcription factor 7 [Source:MGI Symbol;Acc:MGI:2443472]

Coordinates

chr15:102364008-102371368:-

Coord C1 exon

chr15:102371171-102371368

Coord A exon

chr15:102368614-102368722

Coord C2 exon

chr15:102364008-102364869

Length

109 bp

Sequences

Splice sites

3' ss Seq

TACTTCTCTCCCCCCTTTAGAAT

3' ss Score

10.05

5' ss Seq

TAGGTAAGT

5' ss Score

9.66

Exon sequences

Seq C1 exon

GTCTCTCCAGCTCAGCCCACCCCTAGCACTGGGGGACGGCGACGGCGTACAGTGGATGAAGATCCAGATGAGCGGCGGCAGCGGTTTTTAGAGCGAAACAGAGCTGCAGCCTCTCGATGCCGGCAAAAGCGGAAACTGTGGGTGTCCTCCCTGGAAAAGAAGGCAGAAGAACTTACTTCTCAGAACATTCAGCTGAGT

Seq A exon

AATGAAGTCACATTACTACGCAATGAGGTGGCTCAGCTGAAGCAGCTACTGTTAGCTCATAAAGATTGCCCAGTCACTGCACTACAGAAAAAGACTCAAGGCTACCTAG

Seq C2 exon

AAAGTCCCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCCCAGTGATTCAGCACAGTTCCGCATCAGCCCCTAGCAATGGCCTTAGTGTTCGATCTGCAGCTGAAGCTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCCAAAGGACAGAACTGAGCATGCCCATACAGTCACATGTGATCATGACCCCACAGTCGCAGTCTGCGGGCAGATGATGCCTCCCATGATGGAGAGGTCCCCAGCCAGAGCTCGCCCGCCTGAGCCAAGAGAGAGATCAACTTAACCCCTCCTGTCTGTCTTGGAATTGGGCAGAATGGAGAGGGAGAAATTGTGTGTTGTGAGTATGGACAGATGTGGGGCTTTTCTCTTTAGCCACATGATCATGTACGATTAACACCTGTACTAGGCGCTTCTGGCCCCAAAGCCACATAGATCATCCCCCAAGGGTAGGGTTTCTTATGTACCTACAGCCAAAGGCCTTTCCATATGGTCTGAGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000052414-'11-15,'11-13,12-15=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. Stop)

No structure available

Features