MmuEX6075450 @ mm9

Exon Skipping

Gene

ENSMUSG00000061544 | Zfp229

Description

zinc finger protein [Source:MGI Symbol;Acc:MGI:2679295]

Coordinates

chr17:21879463-21885935:+

Coord C1 exon

chr17:21879463-21879589

Coord A exon

chr17:21880826-21880924

Coord C2 exon

chr17:21882014-21885935

Length

99 bp

Sequences

Splice sites

3' ss Seq

TGCCAATTTCTAATACGCAGGTA

3' ss Score

6.17

5' ss Seq

GAGGTGAGT

5' ss Score

10.03

Exon sequences

Seq C1 exon

GGTCTGTTGACATTCCGAGATGTGGCTGTGGACTTCTCCCAGGAGGAGTGGGAATGCCTGGACTCTGCTCAGAGGGCTTTGTACATTGGTGTAATGTTAGAGAATTATAGCAACCTGGTCTCTGTGG

Seq A exon

GTATTATTGTGTGCAAGGCAGACCTGGTCCCCCATCTGGAGCAAATCTATATACCCTGGAACGTGAAGATAAAAGAGATGGTGGCTAAACCAGGTAGAG

Seq C2 exon

AGAGCTATCGAATGTGCAGTGAATCTGAGATTGTCTTCTATCAAGACTCGAAGAATATCATCTATGAGCATGTGGATATACAATGGAAGTCCAGTGAATGTAATGAAATTGGCAAAATGCTTCATGAATCCTCCGGAGGGTGGATACTTTGCAAAACAAATAATACTCCAGAAATCTGCAACAAATACAGATTTGATAACCACAAGGATGCATATATTGAATCAACAAACCTCAGTAGACATAAAAGTATGCACACTGAAGAAGAACCTTGCAAATATAAAGACTATGGCAAATCTTTAAGTTTGTTTTCAAATGTAAGTCAGAGTCATGGAATCTACATAGGAGAGAAAGAATATAAAGAATGCGATAAAACTTTTGGCTCTTTCCCAAAACTTGTACAGCTAAGAATCCATAGTGGAAAAAACCCACAGAAGTGTAGGAAATGTAGAACAGGATTCAGGACCTGCTCAAGCCTCAGTACGCATCAGAGAACTTATACT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000061544-'7-8,'7-7,9-8=AN

Average complexity

A_C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.029

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2)

Main Inclusion Isoform:

ENSMUSP00000065379