MmuEX6075962 @ mm9

Exon Skipping

Gene

ENSMUSG00000024173 | Tpsab1

Description

tryptase alpha/beta 1 [Source:MGI Symbol;Acc:MGI:96943]

Coordinates

chr17:25480190-25481860:-

Coord C1 exon

chr17:25481596-25481860

Coord A exon

chr17:25480601-25480764

Coord C2 exon

chr17:25480190-25480528

Length

164 bp

Sequences

Splice sites

3' ss Seq

GGTCTTTCTTTCACCTACAGTAA

3' ss Score

7.64

5' ss Seq

CAGGTGAAC

5' ss Score

5.56

Exon sequences

Seq C1 exon

GATGTTGCTGACCCCAACAAGGTCAGAGTACAGCTCCGTAAGCAGTACCTCTATTACCATGACCACCTGATGAATGTGAGCCAGATCATCACACACCCCGACTTCTACATCGTCCAGGATGGGGCAGACATTGCCCTGCTGAAACTCACAAACCCTGTGAACATTTCTGACTATGTCCACCCTGTCCCCCTACCTCCTGCCTCAGAGACCTTCCCCTCAGGAACGTTGTGCTGGGTGACAGGCTGGGGTAACATCGACAATGGTG

Seq A exon

TAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAAAACCACCTTTGTGACTTGAAGTATCACAAAGGTCTCATCACAGGTGACAATGTCCACATTGTCCGAGATGACATGCTGTGTGCTGGGAATGAAGGACATGACTCCTGCCAG

Seq C2 exon

GGCGACTCCGGAGGACCTCTGGTCTGCAAGGTAGAAGACACCTGGCTGCAGGCAGGCGTGGTCAGCTGGGGTGAGGACTGCGCACAGCCCAACAGGCCTGGCATCTACACCCGGGTCACCTATTACTTGGACTGGATCCACCGCTATGTCCCCAAGGACTTCTGAGTCACATCCAGGATGACCTCCGTTCCTCCCAGCATGCTGCTTCCTGCCTGGGTGGCATCCCTGCCTTCCTCTCCTGCTCCCCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCTCTGCTATGCCTCAATAAAATGCATTAAAGCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000024173-'3-4,'3-3,4-4=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features