MmuEX6077676 @ mm9

Exon Skipping

Gene

ENSMUSG00000036036 | Zfp57

Description

zinc finger protein 57 [Source:MGI Symbol;Acc:MGI:99204]

Coordinates

chr17:37141742-37147674:+

Coord C1 exon

chr17:37141742-37141848

Coord A exon

chr17:37142995-37143139

Coord C2 exon

chr17:37146364-37147674

Length

145 bp

Sequences

Splice sites

3' ss Seq

CTCTGTATTTACATTCTAAGTCT

3' ss Score

4.25

5' ss Seq

TCGGTAAGA

5' ss Score

10.53

Exon sequences

Seq C1 exon

ATTTCTAGAAGTGGGCACCAACAAATTGTGGCTAGAAGCAGTCTGGAATAGAAGTCAAACGCCTAGGACCAGCCTGGCATTACCAAACAATGGCAGCTAGGAAACAG

Seq A exon

TCTTCCCAGCCATCCAGGACACCAGTCAGTTATGAGGACGTGGCAGTGTCTTTCACCCAGGAAGAATGGGAATATCTTACTTCTACACAGAAGACCCTTTACCAGAAAGTGATGTCAGAAACCTTCAAGAACCTGACATTTGTCG

Seq C2 exon

GAAGCAAGAAGAAACCTCAAGAACCTAGCTCAGATCTGCAAGATAAGAACGAGGAGCAGGAGAAGTCCTCCAGTTGCACAGGGGTATTCAAAGGTGGACCATTCTTTTTCTGTCTGACCTGTGGCAAATGTTTCAAAAAGAACACCTTCCTCTTTAATCACCAGTTTCCTGTGAGGTCCCGGAGGCTGGCAGTCACAAATCCACAAAGCCGCAAAGGCAAGGGCTACAAGGCTCAGCATCGTGGAGAGAGGCCTTTCTTTTGTAATTTCTGTGGCAAGACTTACCGTGATGCTTCTGGACTGAGCCGTCACCGACGTGCTCATTTAGGTTATAGGCCCCGTTCATGCCCTGAGTGTGGAAAGTGTTTCCGGGATCAGTCTGAGGTCAACCGTCACCTGAAGGTACACCAAAACAAGCCAGCAGCTAGCAACCAGGCTGGCAACCAGGCTAGCAACCAGAGGCTGAAGAGTAGGGTTCCACCTACAACACCTAGATCCCAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000036036-'12-15,'12-10,13-15=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=1.000 A=0.063 C2=0.363

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=83.7)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF0009621=zf-C2H2=WD(100=6.2),PF0009621=zf-C2H2=WD(100=6.0),PF0259110=DUF164=WD(100=12.2),PF0009621=zf-C2H2=WD(100=6.2),PF0009621=zf-C2H2=WD(100=5.7)

Main Inclusion Isoform:

ENSMUSP00000065811