MmuEX6089752 @ mm9

Exon Skipping

Gene

ENSMUSG00000035355 | Kcnh4

Description

potassium voltage-gated channel, subfamily H (eag-related), member 4 [Source:MGI Symbol;Acc:MGI:2156184]

Coordinates

chr11:100618393-100621256:-

Coord C1 exon

chr11:100620844-100621256

Coord A exon

chr11:100618881-100619114

Coord C2 exon

chr11:100618393-100618539

Length

234 bp

Sequences

Splice sites

3' ss Seq

TTGACTTCTCCCTCCTGTAGACA

3' ss Score

10.32

5' ss Seq

ATGGTAAAG

5' ss Score

5.39

Exon sequences

Seq C1 exon

GTGGGCCGCTCCCCTCTGGGAGGAGGGCCACAGAGGAGGGCTTCGGGTGTCTCTGGCGGCCCCTCCCGGTGCGGAGCCACGTGGTGGGCGCGGGCCGAGCCCTCCGGGGAAAACCTGACCCGTGGGGAGGTGGGGCGGGGTGGGGGTGGCGGCTCTCGAAGTGCTGCGGAGCAGAGCTTAGAACTAACAGGTTCAGAGCACACAGGCAGCGGCGGCGAGAGGAGGGGAGGAGGCAGGCCGGCGCATGGGGCGCCCCGGCCCCGCCGGTAGCGCGCCCCCTCCGGCCAGGCCGCGCTGAACGCAGCCCGCGCAACGCCTCGAATCCGTACCCGGGGCCATGCCGGTCATGAAGGGGTTGCTGGCCCCGCAAAACACCTTTCTGGACACCATCGCCACCCGCTTTGACGGCACGC

Seq A exon

ACAGCAACTTCCTTCTGGCCAATGCACAGGGCCCACGGGGTTTTCCCATCGTCTACTGCTCTGACGGCTTCTGTGAGCTCACAGGCTACGGCCGCACCGAGGTCATGCAGAAAACCTGTAGCTGTCGGTTCCTCTATGGCCCAGAGACCAGTGAACCAGCCCTGCAACGGTTGCAAAAAGCCCTGGAGGGCCACCAAGAACACCGAACTGAAATCTGCTTTTACCGAAAGGATG

Seq C2 exon

GCTCAGCCTTCTGGTGTCTTCTGGACATGATGCCCATCAAGAATGAGATGGGGGAGGTTGTGCTTTTCCTATTTTCCTTCAAGGACATCTCTCAGAGTGGAGGCCCAGGACTTGGCTCACCAGGAATCCATGGGGACAATAATCACG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000035355-'0-1,'0-0,1-1=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)