MmuINT0043190 @ mm10
Intron Retention
Gene
ENSMUSG00000044647 | Csrnp3
Description
cysteine-serine-rich nuclear protein 3 [Source:MGI Symbol;Acc:MGI:1925021]
Coordinates
chr2:66019440-66031546:+
Coord C1 exon
chr2:66019440-66019736
Coord A exon
chr2:66019737-66021970
Coord C2 exon
chr2:66021971-66031546
Length
2234 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGG
5' ss Score
11.08
3' ss Seq
TCTGTGTTCTTCCTTCCAAGGTG
3' ss Score
10.5
Exon sequences
Seq C1 exon
ATGACTAAGAATGGCACTGTAGAGTCTGAGGAAGCTAGCACCCTGACCGTGGATGACATTTCCGATGACGATATTGATCTGGACAACACCGAAGTGGACGAATACTTCTTCCTACAACCCCTGCCCACAAAAAAGCGGAGAGCTCTGCTGCGCGCCTCGGGGGTGAAGAAGATCGACGTTGACGAGAAGCACGAACTGCGGGCCATCCGCCTTTCTCGGGAGGACTGTGGCTGTGACTGCAGAGTGTTCTGTGATCCAGAAACCTGTACCTGCAGCCTGGCAGGCATTAAGTGTCAG
Seq A exon
GTAAGGATTGGGAGCTTGGGCATCTGAAAAGACTGTTGCGTGCCACCCCAGAAAGAAGCACTCATGCTGTGTATAATAAGATATTTTTTTACCTGAAGGAAAAAAAAAATACTGGCAAGGAAAGATACATAATTCAAGGGGAAAGAAATGCCCCAATTCAAAGGCATTCATAAAATGCTTATACTGTGTATACTGTGAATGGCAATTCAAACTGCAGCTGAGTTTATTGAAGGTGTTTCCTCCCAGATTCGGTCATTGCACCAGTTTATTTTAGCTTTTTTACACGCAGTCTTAGAGAGGACACCGTATGCTCCATTTCGGTTCATATTTTCTGGTTCATCCATGGGGTGTAAGTGACAATCTATCACCAGTGGTATAGACTTGCTGGAGAAGTCCCTAGCCAGACAGATCTTTAAAAAAAAGCAAGTTGTGGAGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCTTTTGTAATGGGATCTGATGCCCTCTTCTGGTGTATGTCCAAAGACAGGTACAGTGTACTCAGTCACATAAAATAAATAAATCTTTAAAAATAAAATAAAAACCAAAAGAGCAAGTTGTACTCTGACCTTGTCTGAAATAGGCATGTCAGGTAAACACTTTGGGCTCTGTCATTTCTACAGTGAGCAGGTTGAGATGCTGTCAGACAGACAGCAGAATCTAACTTGACACATATCTGTAAACAAGGTTTTCCAGGGGTGCAGGCACTTGCCTGTTGCCTGTGATGGGCTTCACAGTCCTGAGATGACATGGTTGCAGACTCCCAAATATTCTCCTACCCCTTTTCAATGAAACATAAAATGTACTTACAATTTGCAGCACTTACTTGGGGCTGCTATAGTTTCCTTAACAAGAAAGGGGCATCTATCTGATTGTGGCAGCAAGATTGGCTTGAGGAGAATGAAGCAGCAGCAAGGAGAAACCTTTTTTACAATTTGAGAATAGCCTCATAAATGGCGGGAAGTCTGTCTCGTTTCTCAGAAGCTGAATTTTAAGTTTATATGAAAAATAGCGGGAATAGCCTTCCCTGCCTCACCAGGATGGCTATGCTTTTAAGACTATGACTTTAAAATGAATTAAAGAGAAAAGCAATAGTTTATCAATTCTTTGACAAGGTGACTTTCTGGTCCTATCCATCTGAAGTTTAGGGGAGCCTTGTGAATGGTTACCTGCTCTTACTTTATGTAGAAATAGTTCTATTCATTTAAAAGGAGAAATTCGCTTAATTCGCTTCAAAAGAGAAAGGCCCCTGAAAGCCAAGGGCAGTTCCCTTCCCAGCAACTGATGAATGAGAGCATTTTCCCACTCCATCCACTCTCTCCTTTCTTTTCTGAGTCTGGAGCCTCACGGACATAATGGGCAAATACTCTACCCCCACTGAGTTAACGTTTTTTTAAAACATACTATTTTGAAAAAGGGTTTTACTAAGTTGTCTGGGCTGGTCTTCAGCTTGCAGGTCTCCTGATTCCCTGAAGTTACATTCTTTGGCACAGGAGAGGTCCATTTGGAATGGGCTTCTCTTCTCGAGAGGGAAGCAGGTCAAACAACCTGCATCCACAAATCAAGGGTCCACTGAGAAGACACAGCGTCAAGATAATAGTATGCACTGGGTGACCCTAAGTAGTGTCACCTCAGACATCCTGAGCAGTGAAGGTCATCTGATAAAAGGGAAGAACTGAGGAGCATGTGATGATGTCATAGAAGTACATGTGATGATGTCATAGAAGTTAGGCTACGGGTCCCCTGGGGGGGGGGGGCAGTCTGCCTGTGACCTAGAAGCAGGTGAGTGAGTTGGAATGAACCAGATGAACCAGAAGGGAACCCAGGTTGCAAGATGGGAACAAAATCAAATGCAAACAGGGAAGGGAAGTAGAGAGTGGAGAAATTCGAAAGCCCTAGGGGTTCAATCAAATTTAAAATCTCAATTATCCTCCAGCCACCACTGTTTTGAACATAAATTTAGAAACGGTTCACTGCCACAACTTAAGTCCTCACTTCCCTGGCTCCTTTTACTTGCAGCGTATTTGCCGTTTGCTGAGACCGGAGTAGAACCTGAGTGCTGTGACTTCATTCAGGAGTTGTTACAAAGTCCTTGATTGTGTTTGCTCTGTAATAGTTCCTTGCTGCTAATCTGTGTTCTTCCTTCCAAG
Seq C2 exon
GTGGATCGTATGTCTTTCCCATGTGGCTGCACTAAAGAAGGCTGTAGTAACACAGCAGGTAGAATTGAATTCAATCCTATCCGTGTCCGGACTCATTTTTTGCACACAATAATGAAACTTGAACTGGAGAAGAACCGAGAGCAACAAACCCCCACGCTGAATGGCTGCCACGGGGAGATAAGCGCCCATGGTCCTTCCATGGGCCCTGTCGCTCACTCTGTAGAATATTCCATCGCAGACAATTTCGAGATTGAAACCGAACCCCAGGCTGCTGTGCTGCACCTACAGGAGGAACTGGACTGCCAAGGAGATGAGGAGGAAGAGGAGGAGGACGGAAGCAGTTTCTGCAGTGGAGCCACTGATTCTAGCACCCAAAGCCTGGCTCCCAGTGAATCGGATGAGGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAAGATGACGACGACGACAAGGGAGATGGCTTTGTAGAAGGGCTCGGAGCCCATACGGAGGTCGTCCCCCTTCCGTCTGTCCTTTGTTACTCTGATGGCACCGCAGTTCATGAAAGCCACACAAAAAATGCTTCATTTTACGCTAGCTCTTCAACTCTCTACTACCAAATAGATAGTCACATCCCAGGAACTCCTAGCCAGCTCTCTGACAACTATTCTGAAAGAGATACTGTCAAAAACGGTGCCCTTTCGCTGGTGCCTTACGCCATGACCCCAGAGAGGTTTGTTGACTACGCCAGGCAAGCAGAAGAGGCCTATGGAGCCTCCCACTACCCAGCTGCCAATCCGTCTGTCATCGTTTGCTGCCCCACCTCTGAAAACGATAGTGGGGTGCCCTGTAACCCCTTGTATCCTGAACACAGGTCCAATCTTCCCCAAGTGGAGTTTCACTCATACTTGAAAGGCCCTGCCCAGGAAGGGTTTGTTTCCACATTGAATGGCGACAGCCACATTTCAGAGCATCCTGCAGAAAATCCTTTGAGCCTTGCAGAAAAGAGCAGATTGCATGAAGAGTGCATTCAGTCCCCCGTGGTGGAAACGGTCCCCGTTTAGTTGCTTAAATTATTCTATTACAGGACCAAGTCTTCTATTTAAGGCACTGTATTGCCTTTGCTGGGCTCATCGTTGTTTAAACCTGAAGGCCAAGAGTTATGTGGACTGTGATTAATCTTCCAGACAGTATTTCCTTCCTTCCTTTCTAGCTTCCCAACTGTGGCGTGGCACAAATACAGTCGCTATGGGGATTTTAAACGATTTTGAACTGTTTTGATAGAAAAATGCTAAATTTAAAAAAAATGCATATCTTACAGTTGCCTACCTGTCAAACTGTGTGAAACCTGCCAAGCTATGCAGATCATAGCTCCAAGTTTTAGATTATCGGGCCTGTGCAAGATTGTTAACTAAGACTAGAAAACAAGCAGATTTAGAGTCCTAATTTTTCGATATATCTGAAGATGATGGTGACTTTTTAATGTAAAAGTAATTATTGTAAGAAAAAAAAAGATTGAATCGTTTCTTGTGTATTTTATTTATGGTAGTTTAGAAGTCATGCTTTGAAGAAAATGAACAGCATGTTCATTGAAGCTGAAGACGTGTTAGCTAGCACCACAGAGCATGCCCAGACGATTGCATCTGGAATCCACCCACATTTTTACGATCATGACTCAGCAGATTTGCAAATACTTTCTTAAGGATGAAATAGGCCTATTTTTGCTATTTGGGACAAATGAGTCTATACGTGCAGGTCCTTATGCAGTTTTCTCTCACGTTAAGAGTTAGGACAATCCTCTGGCGAGGGTCTAGTCCTCCGCTCTCCCTCAGCTGAGATAGACGGAATTGCCTTTCCTTTGTTAAACAGTGTCATCTTGTTTCTTAGCTTGGACAGCACCTTTAAACTCAACTCCCTCCTTCAGAATGCACTTTAGTGCCCCTTCACGGTACCTCGTGTGGGATGGGGTCTCAGAAGGCTTTGAAATATTTTTTTTTTAATTATTAAAAAAAAGTAACTAAGGTTCATACAATAGAGAGAGAGGATTCTTCCAATGACATGAAGGAAAATGACTTGTTTCTTGTTTTCCTTCACCGCTCTAGGACCTAACTCAATCCTTACAGCGAGAAGGCTGGGGGTGGGGGCAGAGCCTCAGCACCCCATCACCCTCTACAAATGCAAAAATGTGTAATGCCACTTAATGGCTAGCTGATTCAAGGCAGGCCTGGGCTCACTGACTCATTAGGCTTCGTTTTCTGGAGCTTTTTTTAAAAAAAAAGTCTGTCTTGCCTGGGGTAGTCAGCAGCACATCCCAGAATGCATTGCGAAGGCAGCCACCTCACCTTCTCTTCCTTAGTAAAGAGAACGAATAGAAAGGAGACACTCCCCGCCCGCCTGCTTCGAGCCTCACCTCAGAGGACTTGGAGCAACTTCTTTCCCATCAGCTTAAGCAGCTATAGAACGAGTGTTACGGTTTCCCCCATGCAGTTATTCTGCTGAATCTGTTTTCCAGTTTTGACATTGTATTGTGGCATCATTTCTCATACTTTATGGCTATTTAAAAACGCAGACACACCCCTACTTCGTAGTAACGGCGTCTTCTAAGTTTTTTATGCCTCCTTGATGTGGGCATTTGAATAACTTTCGGATTTCAGTTCCTTACAGAATACTATTTGATCTGACGAGGCTTGAATGTGCTTCAGAGTCCTCTGGTGGGAAGCCGCTACTTAAACTCCATGTGGGGAAAGTACGTTCGCTTGTGGAGTTGTTTCTTCTCTAAACCACCTCAAGACTAAATAAATCAACGCTAATTTTTACTACCATTAAAAGGACTTTGGGTTTGTCATGCTATTGAAAGCAGTAATGGGGGCTGACTACTCCTTTTGGTTGACCGGTGGGGCTAATCTGGTGGGAATTCTGTGGTAATATGTCCAGAGTTCTCTGCAGCGTTGCCATCAGTAGCATTTGGTTTCCAGTTAGGCTGCCTCCTGCCCACACAATCTAAAGGGCAGGGGCTCAGAGAAGAAATGACAAAAAGCTATTGTTCCTTCGTTCAAGCTAATGAAAGAATTCTGTGTTCCATATTTGCTGGGCCATTCCAACCTCTGGAAGTATCTCCTGGTGAGACACTCGCAGGCTATTCTTGGAACAGAGTGTGGGGCGGCCCCGGGTAATCCTGACTAAGGTAGAGTTGATTTGGTGAATGACAGTCCACTTCCTGGATCCTCAGAGATGTTTCTTTCAGTCCAGCTTTATTTTCACAAAGTTTGGAGCATTTTTGTATCTCATTTGGTTTTTCTTTTGTAGTCCTTGCTTTTCAGAAACAGAGCTTTCTTCCTTTCTCTATTCAAGTGAGATAAAAAGTTTCACTCTGCTAAGGATAATTACCTTTCTAAGCATGAAAACAGACATGCTAAGTTTTCACATCCCTAAGTAGACATCCCTCATGAATCAGAATCGTTACAGGCCATCTATTTTAGCAACAATAGCAAATCAAACCCTACTTGCCTTATCTTTATTAGACACACACAAACACAGAATACACATACAACATCCTCTAGAGAGGGGCAGATTGTGGGCAGTAGGTAGTAATGAATACTGGATAGTTAGTTCCTCAAGTACAATCAGGCTCTGCTTTACCTAAAACCATAAAGAGAAGAGAATTTTGAGAGCGATTGGTTGAAAGCATTCAGTTAAAGTCACAAATAATATTAATGAGGAATTATTTCATTGTGACTTCCTTTCCCAGAAGGAACAGAACAGAGAACACAATGGTTGTTCTGGCTTGTTCTTCCTGCTAATAGACCTACTCAATAGAGCAACCCAAGTGCCAGGCAGGTTCCAGGCAAGTGCCTCAGTCATGACTGCTTTTCAAGGGGAGAGGGGCACTTAGCTGCTACCAGGTTGAGACACTTTACATCTTTGTACCAAGGGACAATGATTTGACCTGCAGCTATTGTGTTACTTCCGTTAGTATATCTAACCAAATTAGAGTCTCTCTTTGCACACAGTTCCCAAGTCAAGCACTATCAACTGCAAAGCCCAGTGTTCCAGACCCAATCTAAATAGTTTAAAGATTTGATTCCCAGCTATACTAGCCAAGTATAGCTGGCCAGTCATGTAGCCTGAGCAGCCTCACTGCCCTTTAATTTTTTTTTTAAATTTTTTATTGGTAGAAAGAAATAAAGAATATTTTAAGTCCCTCCCCCGGTCTATTGATCATCCAATATTGAAATGTGTGTAAAATCCAATTGTCTCTTTTCTTTTGGTAGATTGAATAATGGACTATTTGAAAGCCAGTCTTGTGTTAGAATTATGTTTTTCTGCCCATGTCATGCCAACTACATGTAAAATATCTAACATTTGCTCGAGGGAGAAAATCCTGATAATCACATGGCCCAGCAGGACCACCTTCTTCTGCTCACTCCTACAAAACAGTGCCAGTTATAGCAACTTGCCACAATTCTCAAGGATGCTGAGCTTATATCCATTATATTCTAAGCAAAGTTATGACTTAGATTTTATTAAACAAGATTACCATGATTTATTTTTGTAATAGATACCTCACTTTTTTTTTTATTGCTGCCTTGTACAAGTTCTTAACGACTTGGCATTGATCATCAGAATGTGTTAGATATGCACTTTTTCTTTTAACCAATATTTATTGAATACCACCTATGTTATAACAGCTGACCTGGTAGCAAAAAGAGCAGGGGACTCCCGTATTTGTAAGGGTGGGGGACAAGGAATGGTGACATGAGATGATACTGGAATCCTCCATGTCCTGTTGGAAGCACTGTCACCCACCCATTCTTCTTATTCTCTACAACCTGCATCTAAATGGTGCTGATTTCCCTAAATTGATTGAACTTATTACATCCCCCTGAAGCTTAGGAAATACGTTTGGATTCAGGGAAAAGATGTTCAGAAAATTGTTTATTGGATGCAGCACCATCTAGGAAAATGTCGAATGTATGCCAGTAAAACTTCCACCAGTTTTGGGAGGAGAGTTAATTAATTCAGAACCCAAAGAAGTTCGGAAGCAGAGAGGGACATGACCCTCTTACTCATTTTATAAAACAGCTATTATGATGGCAAAACCCTGCACAAAGGCGCTGACTGAAAGAAGACAGAAAATGAGGGAGGTTATTGGTGACCCCTTCCTTTAGCTGTAGTTACAATCCAGTGACAGTTTACAGTCATTATAGCTGACATATGAAATGCCAAGTGTAAATGGAAAGCACCTTTATGCTTGCAAGGTCAAAAGGACTATAATTTGAAATTGTAACTATTGTATTGTTACCATGACCGACACCTGAAGTGCAAGTCTTGTGTACGTTTACTTCCAATACGAAATGGAAGTTTCTTATTACATCATTTTCCAAGAATTACAAGCGTGTGGCAGAGTCATTTAGATGTTACAGCTTTGCGCCCACAGTTCTGCTCATCAGATATTTTCTGTAGCATGGCTGTGTGTTACTAAACAGCACAGCATCTTCCTCTTTCATTGCTCGTCAGAAACGAAAACCTAGAAGCTGAGTACTGCCTGGGTTTTCTCTAGTGGTCAGTAGTAGCGTTAGTCTTAACTGTATGCTGTCTTGCCTGCCTTGGTATTTCCATTCTGAGCGCTAAATCAGAAGAAGGGGAGTTGGGAGAGGAGGAACAAACTTCAGAGCCTAAACCATATACCTTTTCAGTTCATTGACTGTGGGTAGATTTTTTTTTAATGACCTTAATAGAGAAGCTGGAACGTCAGTACATGCAGATAGTTCTTATGTATGGGAAAAGAAATCACTCCAAAGATTTATGACCTGTGGGTTACTGTTTTCTTTTCTTGCAATTAGCTTTTCACTAGACAGGACCACTGCTTTGTATCTGACCCTTCATGCTTGCTTACATTTCAAGAAAAGACATTTCTATTGTTATTTGATTTCATCTTTCACAAAAGCAACCAACCTTATAAAGAGGGATGATCGATGTTGTTCTAGACAGCATTTGTCCAAGGCAGCTTTGCTGTGATTCCTCCATCTATCTCATTAGCATACTGGTAGTAAAGTCAGTTCAAATTATAAACTTCGCCACATGTGCAAGGCCATCTAAGCATCTTTAAGGATAATGTATATTGATTAGAAAGGACTATAAGGTGAGAAATGGAATAGAAATCAGCCTTGCTTTTGTCAAAACTGATTTACATGGCTTTCCTGATTTTTAGTTGTAACTTTAAAATATGTCCATAGTTAAATGTCTTCTTTCTTCTTTTTAACTCTTTTCCAATATTTTTTATCTGGCTTAGAATAAACCTAAAAGTTATTTATTGAGTACTTGGAAGAAAACTCAACTTTAGGAAGTCTCTTTACAATGTATCTAGAAAATTCTATCCGGACTATGACTGCTCACTCTCCTGTCATGTGCCCTGGGGTAGATTGTTATTTCTGTGTCATAGAAATATCAAAAGGCAATTTGTAGCACATTTTATCCAACATTGCTTTGCCCTCTCTTCCTGTTGGTCATCAATCTTTCTCTCTTTTCTTAAAAATGCCATCCATATTAAAAACTAATTTGAAGAACTGTGTGAATTATAGACGTTTATTTAGTTATGAAGAAAACGAAGTGCTCAGTTTTAAATCTAAATTCCCCTAAAGAGGGAAAAAAATAGCTAAAGTTAGGGAATAAATTGTTACCCATTTAAAAATTAAGTATTTATACTTGAAGGGTATAATGTTACCTAAATGATATCTGGACTTGATAGACTTTTAAATTTTAATAGCTACAAATGTCATTTTTAAATTATAACTAATCACAGTCCACTGCCAGGCTATGCCATGTCCAACAGGTAACTTGGAACAGCTTAATCTCCTTAAAGCTATTCACAGAGACCAACCAAGCATGAATAATGGAAGGCTTGAGATTTCTCTGTATTCTTCAGATTGTATAGGCCCGAGCCTAAGAGAAATCTCCAGAGGTCACACGGCTCGTTCATCTACCTCTGGGGAGGACTGTCAGTCAGGCATATCCAACAACACAGATACCCATTTATTCTCGACCCCTCTAGGGAAGATGGTTTCCTTGGCAACAGAATCCAGCTCTTTCAGGTTTTCTCACAATAAGAACATATCTTGGCCAGTGTTTGTGGAAGAGGCACCTGGCAACAGTCGTGGTGATTTGGGCAATTGTGCTGGAAGACTGTAGAGGTTGGGTACCCCTTCAGTTGCTGATTACTACATAAGGCAATTCTCTAAATGTCTTAAGAAAGCAAATCTGAAAGGAGAATGTAGGTACTCGGATACTTTGTAATGTAACCTGCTTTGGGAAAATAAAGGCACTAGGCAGTTTTTATTCATCTATATTTATCTTTTTAAGATTACTGTCATGTTAGGGGAGTGATTATTTTATATCCCAGACACCAATGTCAGGACTAGAGTCAAGTGACTTGACTTTTTTTTCCTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAACCCTTCAATTCTCTGAGAAGTTACAATTTCAAAACGAAAAGGCCATTTTTTTCTATGTGCTTGCTTGTGAACAAGTACCTCCTTGGTAACCTCCTTTTAGTGTAAGTAACAAATGAGAATCTAGACTTCTCCTCCTGGAAATGTGATTGAAGAATCTAATATGGAGTAAAATGACTCCAAAGAATCACTCAGCCACCATTTGGTCCTAGCCTGTGTATGAGTAAAGAATAGCTGCTTACATCCTCAGAGATCAGTGAGTCTTTTTGTTTTAGGTGATTTACAATTTGTCATCTTGACAAGGCCTGAAAACTAAAGGAATTCTAGAAAGGGGTGGTGTTTGTTTTCCTTTTTTTTCCCTCTTTTCCCTTGGTGAAATCACTTGACCCCGATACTCCCTGCAAGCTTTCAGAGCATTTTCTGTTTGCTGCAACTCTGACACAGCGAGAACAGGAGCTAAGGACCACCCTGGGAGTCAGCATTTCCTCTCTCCTTGGCTCTTGCCCAATCTCACTAATGGCTGCTTCTCCCCACCTGGGTGCTTGAGTGACATGACAGCCACATGAACGTACTTTGTCCTCATGAGTAACACTACATGGAAGTGACCCAGTGACACTTTCAGTTAAAAAAGAAAAAGAAAAGAAAAGAAAAGAAAACGTTTCTCTAGAATGCTAATGTAATGAATGGTGAATCAAATTTGGCTTATGTTTGAATTGACTCTAGGCACCTCAACAGAAAGAAGTCTGAGGCATAGTTTGTGAAACATGTTTCCAATGTGTTTGATGATGTATAATAAATGCTAGACAATACAGTGCAGAAATAGTGAAAGAAGACCCCGAACCTGTAGATTACAACTCAGTTCCTAAGAACTCAGCCTTTGTTGCGTCTTCGTAATATTCCTCTGCCTTCTCCTTAGTTTATTGCATTTTGGTGTAATCACCCCTTAAGATAGAGCTATGAATACAATATGTACTGGTTCTTGCCTCTTCATGCAGAAAAGGCATTTTGTTCTTTCCGTGTGTTTCCCTCAGTGTCTGTCACAGGGTATATAAATTTGATAGGGAAGGCCATTTGGCATTGGTCAAGAAAACACTTTTCACATTTCAATTCCATACATTCCGTTGGTTGCATAGGTAAACGTCACCCTTTGCAGTGTCTTCGTCTCACAGTCTTAGACATCGACCGCGTCTCCACCTGCAAGCTGCCATAGGAACTTGGTACGTTTGGAAACCCTTGTAAGATGCAGTGAGCTGGTAGATCATGTGACCCCGAGGACTCATTCGTCCTTCTCTGTGGAAGCACTCATGCATTAGGAATGCTCCCTTAAACAGGGGGAGTCTTCTGAGGGTAATTGTTTTAGGTGTTTGCATTTTGGCCTGTTGGAAGCTGGCGGGGGGTGGGAATTGCATCACCAAAAACTCAGAAAAGCCACAGTATGGTAAAGTACACTTTGACATTGATTGATTTGTATCTTTCAACTGATTTATGTTGTTACTTTTACCCGATAGGTTTTCGGTTGATACTTCATTACTGTTATGTGCACTCTGATGACTTGTCAAATTGAAAGGGAAGAAAATCAAACCACAATCCATACACTCATTTTTATACCATGATGTCATGTTCTATGTCACAGTTTGCTAGCCTGCTTTCTCTTGTGTACAAGTTATGACATCAAAGATGCCAAAGGGGATATGAAATAAGCTACAACGATATTCCACAGAATTTAACCTGGACCTTATGTTGTAATTATTTATATATTCATATTAGCTGTGGTCTTCTGTATTTATATTTTCAGTATTTATTATGAATGACATGGAGATTCCTGTATTTATTGTGGCTTTCTGTTGCAGTGTGTGTATGTATGTATGTATGTATGTATGTGTGTATATATATATACATGTATATACATATATACATATATATATACATATATATTACAAATAAGCATTTTTAAGTCTGATCTTTAAGTTTATTAGTGGCACTTGTATTGTGCTGTACTTTTTATTATATATTGTACAATAGCTTGTCCATTTGTTTGCAACAGAGTAAAACTGGTTTCTAAGTTGTA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000044647:ENSMUST00000122912:6
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.114 A=NA C2=0.546
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF065128=Na_trans_assoc=WD(100=51.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types