MmuINT0043190 @ mm9
Intron Retention
Gene
ENSMUSG00000044647 | Csrnp3
Description
cysteine-serine-rich nuclear protein 3 [Source:MGI Symbol;Acc:MGI:1925021]
Coordinates
chr2:65857497-65869603:+
Coord C1 exon
chr2:65857497-65857793
Coord A exon
chr2:65857794-65860027
Coord C2 exon
chr2:65860028-65869603
Length
2234 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGG
5' ss Score
11.08
3' ss Seq
TCTGTGTTCTTCCTTCCAAGGTG
3' ss Score
10.5
Exon sequences
Seq C1 exon
ATGACTAAGAATGGCACTGTAGAGTCTGAGGAAGCTAGCACCCTGACCGTGGATGACATTTCCGATGACGATATTGATCTGGACAACACCGAAGTGGACGAATACTTCTTCCTACAACCCCTGCCCACAAAAAAGCGGAGAGCTCTGCTGCGCGCCTCGGGGGTGAAGAAGATCGACGTTGACGAGAAGCACGAACTGCGGGCCATCCGCCTTTCTCGGGAGGACTGTGGCTGTGACTGCAGAGTGTTCTGTGATCCAGAAACCTGTACCTGCAGCCTGGCAGGCATTAAGTGTCAG
Seq A exon
GTAAGGATTGGGAGCTTGGGCATCTGAAAAGACTGTTGCGTGCCACCCCAGAAAGAAGCACTCATGCTGTGTATAATAAGATATTTTTTTACCTGAAGGAAAAAAAAAATACTGGCAAGGAAAGATACATAATTCAAGGGGAAAGAAATGCCCCAATTCAAAGGCATTCATAAAATGCTTATACTGTGTATACTGTGAATGGCAATTCAAACTGCAGCTGAGTTTATTGAAGGTGTTTCCTCCCAGATTCGGTCATTGCACCAGTTTATTTTAGCTTTTTTACACGCAGTCTTAGAGAGGACACCGTATGCTCCATTTCGGTTCATATTTTCTGGTTCATCCATGGGGTGTAAGTGACAATCTATCACCAGTGGTATAGACTTGCTGGAGAAGTCCCTAGCCAGACAGATCTTTAAAAAAAAGCAAGTTGTGGAGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCTTTTGTAATGGGATCTGATGCCCTCTTCTGGTGTATGTCCAAAGACAGGTACAGTGTACTCAGTCACATAAAATAAATAAATCTTTAAAAATAAAATAAAAACCAAAAGAGCAAGTTGTACTCTGACCTTGTCTGAAATAGGCATGTCAGGTAAACACTTTGGGCTCTGTCATTTCTACAGTGAGCAGGTTGAGATGCTGTCAGACAGACAGCAGAATCTAACTTGACACATATCTGTAAACAAGGTTTTCCAGGGGTGCAGGCACTTGCCTGTTGCCTGTGATGGGCTTCACAGTCCTGAGATGACATGGTTGCAGACTCCCAAATATTCTCCTACCCCTTTTCAATGAAACATAAAATGTACTTACAATTTGCAGCACTTACTTGGGGCTGCTATAGTTTCCTTAACAAGAAAGGGGCATCTATCTGATTGTGGCAGCAAGATTGGCTTGAGGAGAATGAAGCAGCAGCAAGGAGAAACCTTTTTTACAATTTGAGAATAGCCTCATAAATGGCGGGAAGTCTGTCTCGTTTCTCAGAAGCTGAATTTTAAGTTTATATGAAAAATAGCGGGAATAGCCTTCCCTGCCTCACCAGGATGGCTATGCTTTTAAGACTATGACTTTAAAATGAATTAAAGAGAAAAGCAATAGTTTATCAATTCTTTGACAAGGTGACTTTCTGGTCCTATCCATCTGAAGTTTAGGGGAGCCTTGTGAATGGTTACCTGCTCTTACTTTATGTAGAAATAGTTCTATTCATTTAAAAGGAGAAATTCGCTTAATTCGCTTCAAAAGAGAAAGGCCCCTGAAAGCCAAGGGCAGTTCCCTTCCCAGCAACTGATGAATGAGAGCATTTTCCCACTCCATCCACTCTCTCCTTTCTTTTCTGAGTCTGGAGCCTCACGGACATAATGGGCAAATACTCTACCCCCACTGAGTTAACGTTTTTTTAAAACATACTATTTTGAAAAAGGGTTTTACTAAGTTGTCTGGGCTGGTCTTCAGCTTGCAGGTCTCCTGATTCCCTGAAGTTACATTCTTTGGCACAGGAGAGGTCCATTTGGAATGGGCTTCTCTTCTCGAGAGGGAAGCAGGTCAAACAACCTGCATCCACAAATCAAGGGTCCACTGAGAAGACACAGCGTCAAGATAATAGTATGCACTGGGTGACCCTAAGTAGTGTCACCTCAGACATCCTGAGCAGTGAAGGTCATCTGATAAAAGGGAAGAACTGAGGAGCATGTGATGATGTCATAGAAGTACATGTGATGATGTCATAGAAGTTAGGCTACGGGTCCCCTGGGGGGGGGGGGCAGTCTGCCTGTGACCTAGAAGCAGGTGAGTGAGTTGGAATGAACCAGATGAACCAGAAGGGAACCCAGGTTGCAAGATGGGAACAAAATCAAATGCAAACAGGGAAGGGAAGTAGAGAGTGGAGAAATTCGAAAGCCCTAGGGGTTCAATCAAATTTAAAATCTCAATTATCCTCCAGCCACCACTGTTTTGAACATAAATTTAGAAACGGTTCACTGCCACAACTTAAGTCCTCACTTCCCTGGCTCCTTTTACTTGCAGCGTATTTGCCGTTTGCTGAGACCGGAGTAGAACCTGAGTGCTGTGACTTCATTCAGGAGTTGTTACAAAGTCCTTGATTGTGTTTGCTCTGTAATAGTTCCTTGCTGCTAATCTGTGTTCTTCCTTCCAAG
Seq C2 exon
GTGGATCGTATGTCTTTCCCATGTGGCTGCACTAAAGAAGGCTGTAGTAACACAGCAGGTAGAATTGAATTCAATCCTATCCGTGTCCGGACTCATTTTTTGCACACAATAATGAAACTTGAACTGGAGAAGAACCGAGAGCAACAAACCCCCACGCTGAATGGCTGCCACGGGGAGATAAGCGCCCATGGTCCTTCCATGGGCCCTGTCGCTCACTCTGTAGAATATTCCATCGCAGACAATTTCGAGATTGAAACCGAACCCCAGGCTGCTGTGCTGCACCTACAGGAGGAACTGGACTGCCAAGGAGATGAGGAGGAAGAGGAGGAGGACGGAAGCAGTTTCTGCAGTGGAGCCACTGATTCTAGCACCCAAAGCCTGGCTCCCAGTGAATCGGATGAGGAAGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAAGATGACGACGACGACAAGGGAGATGGCTTTGTAGAAGGGCTCGGAGCCCATACGGAGGTCGTCCCCCTTCCGTCTGTCCTTTGTTACTCTGATGGCACCGCAGTTCATGAAAGCCACACAAAAAATGCTTCATTTTACGCTAGCTCTTCAACTCTCTACTACCAAATAGATAGTCACATCCCAGGAACTCCTAGCCAGCTCTCTGACAACTATTCTGAAAGAGATACTGTCAAAAACGGTGCCCTTTCGCTGGTGCCTTACGCCATGACCCCAGAGAGGTTTGTTGACTACGCCAGGCAAGCAGAAGAGGCCTATGGAGCCTCCCACTACCCAGCTGCCAATCCGTCTGTCATCGTTTGCTGCCCCACCTCTGAAAACGATAGTGGGGTGCCCTGTAACCCCTTGTATCCTGAACACAGGTCCAATCTTCCCCAAGTGGAGTTTCACTCATACTTGAAAGGCCCTGCCCAGGAAGGGTTTGTTTCCACATTGAATGGCGACAGCCACATTTCAGAGCATCCTGCAGAAAATCCTTTGAGCCTTGCAGAAAAGAGCAGATTGCATGAAGAGTGCATTCAGTCCCCCGTGGTGGAAACGGTCCCCGTTTAGTTGCTTAAATTATTCTATTACAGGACCAAGTCTTCTATTTAAGGCACTGTATTGCCTTTGCTGGGCTCATCGTTGTTTAAACCTGAAGGCCAAGAGTTATGTGGACTGTGATTAATCTTCCAGACAGTATTTCCTTCCTTCCTTTCTAGCTTCCCAACTGTGGCGTGGCACAAATACAGTCGCTATGGGGATTTTAAACGATTTTGAACTGTTTTGATAGAAAAATGCTAAATTTAAAAAAAATGCATATCTTACAGTTGCCTACCTGTCAAACTGTGTGAAACCTGCCAAGCTATGCAGATCATAGCTCCAAGTTTTAGATTATCGGGCCTGTGCAAGATTGTTAACTAAGACTAGAAAACAAGCAGATTTAGAGTCCTAATTTTTCGATATATCTGAAGATGATGGTGACTTTTTAATGTAAAAGTAATTATTGTAAGAAAAAAAAAGATTGAATCGTTTCTTGTGTATTTTATTTATGGTAGTTTAGAAGTCATGCTTTGAAGAAAATGAACAGCATGTTCATTGAAGCTGAAGACGTGTTAGCTAGCACCACAGAGCATGCCCAGACGATTGCATCTGGAATCCACCCACATTTTTACGATCATGACTCAGCAGATTTGCAAATACTTTCTTAAGGATGAAATAGGCCTATTTTTGCTATTTGGGACAAATGAGTCTATACGTGCAGGTCCTTATGCAGTTTTCTCTCACGTTAAGAGTTAGGACAATCCTCTGGCGAGGGTCTAGTCCTCCGCTCTCCCTCAGCTGAGATAGACGGAATTGCCTTTCCTTTGTTAAACAGTGTCATCTTGTTTCTTAGCTTGGACAGCACCTTTAAACTCAACTCCCTCCTTCAGAATGCACTTTAGTGCCCCTTCACGGTACCTCGTGTGGGATGGGGTCTCAGAAGGCTTTGAAATATTTTTTTTTTAATTATTAAAAAAAAGTAACTAAGGTTCATACAATAGAGAGAGAGGATTCTTCCAATGACATGAAGGAAAATGACTTGTTTCTTGTTTTCCTTCACCGCTCTAGGACCTAACTCAATCCTTACAGCGAGAAGGCTGGGGGTGGGGGCAGAGCCTCAGCACCCCATCACCCTCTACAAATGCAAAAATGTGTAATGCCACTTAATGGCTAGCTGATTCAAGGCAGGCCTGGGCTCACTGACTCATTAGGCTTCGTTTTCTGGAGCTTTTTTTAAAAAAAAAGTCTGTCTTGCCTGGGGTAGTCAGCAGCACATCCCAGAATGCATTGCGAAGGCAGCCACCTCACCTTCTCTTCCTTAGTAAAGAGAACGAATAGAAAGGAGACACTCCCCGCCCGCCTGCTTCGAGCCTCACCTCAGAGGACTTGGAGCAACTTCTTTCCCATCAGCTTAAGCAGCTATAGAACGAGTGTTACGGTTTCCCCCATGCAGTTATTCTGCTGAATCTGTTTTCCAGTTTTGACATTGTATTGTGGCATCATTTCTCATACTTTATGGCTATTTAAAAACGCAGACACACCCCTACTTCGTAGTAACGGCGTCTTCTAAGTTTTTTATGCCTCCTTGATGTGGGCATTTGAATAACTTTCGGATTTCAGTTCCTTACAGAATACTATTTGATCTGACGAGGCTTGAATGTGCTTCAGAGTCCTCTGGTGGGAAGCCGCTACTTAAACTCCATGTGGGGAAAGTACGTTCGCTTGTGGAGTTGTTTCTTCTCTAAACCACCTCAAGACTAAATAAATCAACGCTAATTTTTACTACCATTAAAAGGACTTTGGGTTTGTCATGCTATTGAAAGCAGTAATGGGGGCTGACTACTCCTTTTGGTTGACCGGTGGGGCTAATCTGGTGGGAATTCTGTGGTAATATGTCCAGAGTTCTCTGCAGCGTTGCCATCAGTAGCATTTGGTTTCCAGTTAGGCTGCCTCCTGCCCACACAATCTAAAGGGCAGGGGCTCAGAGAAGAAATGACAAAAAGCTATTGTTCCTTCGTTCAAGCTAATGAAAGAATTCTGTGTTCCATATTTGCTGGGCCATTCCAACCTCTGGAAGTATCTCCTGGTGAGACACTCGCAGGCTATTCTTGGAACAGAGTGTGGGGCGGCCCCGGGTAATCCTGACTAAGGTAGAGTTGATTTGGTGAATGACAGTCCACTTCCTGGATCCTCAGAGATGTTTCTTTCAGTCCAGCTTTATTTTCACAAAGTTTGGAGCATTTTTGTATCTCATTTGGTTTTTCTTTTGTAGTCCTTGCTTTTCAGAAACAGAGCTTTCTTCCTTTCTCTATTCAAGTGAGATAAAAAGTTTCACTCTGCTAAGGATAATTACCTTTCTAAGCATGAAAACAGACATGCTAAGTTTTCACATCCCTAAGTAGACATCCCTCATGAATCAGAATCGTTACAGGCCATCTATTTTAGCAACAATAGCAAATCAAACCCTACTTGCCTTATCTTTATTAGACACACACAAACACAGAATACACATACAACATCCTCTAGAGAGGGGCAGATTGTGGGCAGTAGGTAGTAATGAATACTGGATAGTTAGTTCCTCAAGTACAATCAGGCTCTGCTTTACCTAAAACCATAAAGAGAAGAGAATTTTGAGAGCGATTGGTTGAAAGCATTCAGTTAAAGTCACAAATAATATTAATGAGGAATTATTTCATTGTGACTTCCTTTCCCAGAAGGAACAGAACAGAGAACACAATGGTTGTTCTGGCTTGTTCTTCCTGCTAATAGACCTACTCAATAGAGCAACCCAAGTGCCAGGCAGGTTCCAGGCAAGTGCCTCAGTCATGACTGCTTTTCAAGGGGAGAGGGGCACTTAGCTGCTACCAGGTTGAGACACTTTACATCTTTGTACCAAGGGACAATGATTTGACCTGCAGCTATTGTGTTACTTCCGTTAGTATATCTAACCAAATTAGAGTCTCTCTTTGCACACAGTTCCCAAGTCAAGCACTATCAACTGCAAAGCCCAGTGTTCCAGACCCAATCTAAATAGTTTAAAGATTTGATTCCCAGCTATACTAGCCAAGTATAGCTGGCCAGTCATGTAGCCTGAGCAGCCTCACTGCCCTTTAATTTTTTTTTTAAATTTTTTATTGGTAGAAAGAAATAAAGAATATTTTAAGTCCCTCCCCCGGTCTATTGATCATCCAATATTGAAATGTGTGTAAAATCCAATTGTCTCTTTTCTTTTGGTAGATTGAATAATGGACTATTTGAAAGCCAGTCTTGTGTTAGAATTATGTTTTTCTGCCCATGTCATGCCAACTACATGTAAAATATCTAACATTTGCTCGAGGGAGAAAATCCTGATAATCACATGGCCCAGCAGGACCACCTTCTTCTGCTCACTCCTACAAAACAGTGCCAGTTATAGCAACTTGCCACAATTCTCAAGGATGCTGAGCTTATATCCATTATATTCTAAGCAAAGTTATGACTTAGATTTTATTAAACAAGATTACCATGATTTATTTTTGTAATAGATACCTCACTTTTTTTTTTATTGCTGCCTTGTACAAGTTCTTAACGACTTGGCATTGATCATCAGAATGTGTTAGATATGCACTTTTTCTTTTAACCAATATTTATTGAATACCACCTATGTTATAACAGCTGACCTGGTAGCAAAAAGAGCAGGGGACTCCCGTATTTGTAAGGGTGGGGGACAAGGAATGGTGACATGAGATGATACTGGAATCCTCCATGTCCTGTTGGAAGCACTGTCACCCACCCATTCTTCTTATTCTCTACAACCTGCATCTAAATGGTGCTGATTTCCCTAAATTGATTGAACTTATTACATCCCCCTGAAGCTTAGGAAATACGTTTGGATTCAGGGAAAAGATGTTCAGAAAATTGTTTATTGGATGCAGCACCATCTAGGAAAATGTCGAATGTATGCCAGTAAAACTTCCACCAGTTTTGGGAGGAGAGTTAATTAATTCAGAACCCAAAGAAGTTCGGAAGCAGAGAGGGACATGACCCTCTTACTCATTTTATAAAACAGCTATTATGATGGCAAAACCCTGCACAAAGGCGCTGACTGAAAGAAGACAGAAAATGAGGGAGGTTATTGGTGACCCCTTCCTTTAGCTGTAGTTACAATCCAGTGACAGTTTACAGTCATTATAGCTGACATATGAAATGCCAAGTGTAAATGGAAAGCACCTTTATGCTTGCAAGGTCAAAAGGACTATAATTTGAAATTGTAACTATTGTATTGTTACCATGACCGACACCTGAAGTGCAAGTCTTGTGTACGTTTACTTCCAATACGAAATGGAAGTTTCTTATTACATCATTTTCCAAGAATTACAAGCGTGTGGCAGAGTCATTTAGATGTTACAGCTTTGCGCCCACAGTTCTGCTCATCAGATATTTTCTGTAGCATGGCTGTGTGTTACTAAACAGCACAGCATCTTCCTCTTTCATTGCTCGTCAGAAACGAAAACCTAGAAGCTGAGTACTGCCTGGGTTTTCTCTAGTGGTCAGTAGTAGCGTTAGTCTTAACTGTATGCTGTCTTGCCTGCCTTGGTATTTCCATTCTGAGCGCTAAATCAGAAGAAGGGGAGTTGGGAGAGGAGGAACAAACTTCAGAGCCTAAACCATATACCTTTTCAGTTCATTGACTGTGGGTAGATTTTTTTTTAATGACCTTAATAGAGAAGCTGGAACGTCAGTACATGCAGATAGTTCTTATGTATGGGAAAAGAAATCACTCCAAAGATTTATGACCTGTGGGTTACTGTTTTCTTTTCTTGCAATTAGCTTTTCACTAGACAGGACCACTGCTTTGTATCTGACCCTTCATGCTTGCTTACATTTCAAGAAAAGACATTTCTATTGTTATTTGATTTCATCTTTCACAAAAGCAACCAACCTTATAAAGAGGGATGATCGATGTTGTTCTAGACAGCATTTGTCCAAGGCAGCTTTGCTGTGATTCCTCCATCTATCTCATTAGCATACTGGTAGTAAAGTCAGTTCAAATTATAAACTTCGCCACATGTGCAAGGCCATCTAAGCATCTTTAAGGATAATGTATATTGATTAGAAAGGACTATAAGGTGAGAAATGGAATAGAAATCAGCCTTGCTTTTGTCAAAACTGATTTACATGGCTTTCCTGATTTTTAGTTGTAACTTTAAAATATGTCCATAGTTAAATGTCTTCTTTCTTCTTTTTAACTCTTTTCCAATATTTTTTATCTGGCTTAGAATAAACCTAAAAGTTATTTATTGAGTACTTGGAAGAAAACTCAACTTTAGGAAGTCTCTTTACAATGTATCTAGAAAATTCTATCCGGACTATGACTGCTCACTCTCCTGTCATGTGCCCTGGGGTAGATTGTTATTTCTGTGTCATAGAAATATCAAAAGGCAATTTGTAGCACATTTTATCCAACATTGCTTTGCCCTCTCTTCCTGTTGGTCATCAATCTTTCTCTCTTTTCTTAAAAATGCCATCCATATTAAAAACTAATTTGAAGAACTGTGTGAATTATAGACGTTTATTTAGTTATGAAGAAAACGAAGTGCTCAGTTTTAAATCTAAATTCCCCTAAAGAGGGAAAAAAATAGCTAAAGTTAGGGAATAAATTGTTACCCATTTAAAAATTAAGTATTTATACTTGAAGGGTATAATGTTACCTAAATGATATCTGGACTTGATAGACTTTTAAATTTTAATAGCTACAAATGTCATTTTTAAATTATAACTAATCACAGTCCACTGCCAGGCTATGCCATGTCCAACAGGTAACTTGGAACAGCTTAATCTCCTTAAAGCTATTCACAGAGACCAACCAAGCATGAATAATGGAAGGCTTGAGATTTCTCTGTATTCTTCAGATTGTATAGGCCCGAGCCTAAGAGAAATCTCCAGAGGTCACACGGCTCGTTCATCTACCTCTGGGGAGGACTGTCAGTCAGGCATATCCAACAACACAGATACCCATTTATTCTCGACCCCTCTAGGGAAGATGGTTTCCTTGGCAACAGAATCCAGCTCTTTCAGGTTTTCTCACAATAAGAACATATCTTGGCCAGTGTTTGTGGAAGAGGCACCTGGCAACAGTCGTGGTGATTTGGGCAATTGTGCTGGAAGACTGTAGAGGTTGGGTACCCCTTCAGTTGCTGATTACTACATAAGGCAATTCTCTAAATGTCTTAAGAAAGCAAATCTGAAAGGAGAATGTAGGTACTCGGATACTTTGTAATGTAACCTGCTTTGGGAAAATAAAGGCACTAGGCAGTTTTTATTCATCTATATTTATCTTTTTAAGATTACTGTCATGTTAGGGGAGTGATTATTTTATATCCCAGACACCAATGTCAGGACTAGAGTCAAGTGACTTGACTTTTTTTTCCTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAACCCTTCAATTCTCTGAGAAGTTACAATTTCAAAACGAAAAGGCCATTTTTTTCTATGTGCTTGCTTGTGAACAAGTACCTCCTTGGTAACCTCCTTTTAGTGTAAGTAACAAATGAGAATCTAGACTTCTCCTCCTGGAAATGTGATTGAAGAATCTAATATGGAGTAAAATGACTCCAAAGAATCACTCAGCCACCATTTGGTCCTAGCCTGTGTATGAGTAAAGAATAGCTGCTTACATCCTCAGAGATCAGTGAGTCTTTTTGTTTTAGGTGATTTACAATTTGTCATCTTGACAAGGCCTGAAAACTAAAGGAATTCTAGAAAGGGGTGGTGTTTGTTTTCCTTTTTTTTCCCTCTTTTCCCTTGGTGAAATCACTTGACCCCGATACTCCCTGCAAGCTTTCAGAGCATTTTCTGTTTGCTGCAACTCTGACACAGCGAGAACAGGAGCTAAGGACCACCCTGGGAGTCAGCATTTCCTCTCTCCTTGGCTCTTGCCCAATCTCACTAATGGCTGCTTCTCCCCACCTGGGTGCTTGAGTGACATGACAGCCACATGAACGTACTTTGTCCTCATGAGTAACACTACATGGAAGTGACCCAGTGACACTTTCAGTTAAAAAAGAAAAAGAAAAGAAAAGAAAAGAAAACGTTTCTCTAGAATGCTAATGTAATGAATGGTGAATCAAATTTGGCTTATGTTTGAATTGACTCTAGGCACCTCAACAGAAAGAAGTCTGAGGCATAGTTTGTGAAACATGTTTCCAATGTGTTTGATGATGTATAATAAATGCTAGACAATACAGTGCAGAAATAGTGAAAGAAGACCCCGAACCTGTAGATTACAACTCAGTTCCTAAGAACTCAGCCTTTGTTGCGTCTTCGTAATATTCCTCTGCCTTCTCCTTAGTTTATTGCATTTTGGTGTAATCACCCCTTAAGATAGAGCTATGAATACAATATGTACTGGTTCTTGCCTCTTCATGCAGAAAAGGCATTTTGTTCTTTCCGTGTGTTTCCCTCAGTGTCTGTCACAGGGTATATAAATTTGATAGGGAAGGCCATTTGGCATTGGTCAAGAAAACACTTTTCACATTTCAATTCCATACATTCCGTTGGTTGCATAGGTAAACGTCACCCTTTGCAGTGTCTTCGTCTCACAGTCTTAGACATCGACCGCGTCTCCACCTGCAAGCTGCCATAGGAACTTGGTACGTTTGGAAACCCTTGTAAGATGCAGTGAGCTGGTAGATCATGTGACCCCGAGGACTCATTCGTCCTTCTCTGTGGAAGCACTCATGCATTAGGAATGCTCCCTTAAACAGGGGGAGTCTTCTGAGGGTAATTGTTTTAGGTGTTTGCATTTTGGCCTGTTGGAAGCTGGCGGGGGGTGGGAATTGCATCACCAAAAACTCAGAAAAGCCACAGTATGGTAAAGTACACTTTGACATTGATTGATTTGTATCTTTCAACTGATTTATGTTGTTACTTTTACCCGATAGGTTTTCGGTTGATACTTCATTACTGTTATGTGCACTCTGATGACTTGTCAAATTGAAAGGGAAGAAAATCAAACCACAATCCATACACTCATTTTTATACCATGATGTCATGTTCTATGTCACAGTTTGCTAGCCTGCTTTCTCTTGTGTACAAGTTATGACATCAAAGATGCCAAAGGGGATATGAAATAAGCTACAACGATATTCCACAGAATTTAACCTGGACCTTATGTTGTAATTATTTATATATTCATATTAGCTGTGGTCTTCTGTATTTATATTTTCAGTATTTATTATGAATGACATGGAGATTCCTGTATTTATTGTGGCTTTCTGTTGCAGTGTGTGTATGTATGTATGTATGTATGTATGTGTGTATATATATATACATGTATATACATATATACATATATATATACATATATATTACAAATAAGCATTTTTAAGTCTGATCTTTAAGTTTATTAGTGGCACTTGTATTGTGCTGTACTTTTTATTATATATTGTACAATAGCTTGTCCATTTGTTTGCAACAGAGTAAAACTGGTTTCTAAGTTGTA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000044647-Csrnp3:NM_153409:6
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.111 A=NA C2=0.546
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF065128=Na_trans_assoc=WD(100=51.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: