MmuINT0153207 @ mm10
Intron Retention
Gene
ENSMUSG00000031024 | St5
Description
suppression of tumorigenicity 5 [Source:MGI Symbol;Acc:MGI:108517]
Coordinates
chr7:109556211-109570111:-
Coord C1 exon
chr7:109570007-109570111
Coord A exon
chr7:109557462-109570006
Coord C2 exon
chr7:109556211-109557461
Length
12545 bp
Sequences
Splice sites
5' ss Seq
CAGGTGGGT
5' ss Score
8.56
3' ss Seq
TTTTTTTTTTTTGCTCTTAGGTC
3' ss Score
11.7
Exon sequences
Seq C1 exon
GGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCCAACAAGAACTCCAGCATCACTCATGGAACCGGAGGCACTAAGGCCCCTCGGGAGACGCTGAGCAG
Seq A exon
GTGGGTAGAGGCATACTTCTGGGAGATGGCATCAAGAGCCAGTCAAATGGTCTGGGACCCAGGTAGGATCTCCACCAAAGTATAAATAATTACCATGACTGCTGATCATCCTGTTTGCTTATTTGGGCCCAGCTTGTGCTGATGATTAGGAGGAAGTCTTGTCTGACATACATAAAAATTCCCTATTTGGGATGGCAACTAGAAGCATTAAGACAAGCTCTGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCAAGAGTTCAAATCTCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACGCCCTCTTCTGGAGTGTCTGAGGACAGCTACAGTGTACTTACATATAATAAATAAATTTAAAAAAAAAAAAAAAGACAAGTTCTGCCTCGTCCTATGAAGCCCTGGCACTCCAGGAACAGGACAGTAATGAGCGGCTTAGAGAAGAGAGGTACGTCTTGGAGCCAGGCTGCAGTGTTGTGAGGAAACGAACCACATTGGGGTAGAGGTAGGTAGGCAGTCACATGTATTAGCAGAAGCCTAGGTTCTCTAACAACTTAGGCCTGCCCGCAGAGAAAACAACTTGGATGAATCTTAGTCAGTGTCTGGTATTATCCACTCTTCTGTTCTTTTAATCCTCTTTTGCAAAGGTAAGAATATAATACTAGAAAAATGAAAGAATTTGGAATCTTTACAGAACTGTGCTCAAATTTAATCTCTGAATACTTTTTTGTTTTGTTTTGCTTTTGTGTTTTTGAGACAGTGTTTCTCTGTGTACCCCCTGGCTGTAGTGGAACTTTGTAGACCAGGCTGACCTTGAACTCACAGAGGTCCGCCTGGCTCTGCCTCCCAAATGCTGGGATTAAAGGCTTGCGCCACCTGTGCCTGGCAAGCTCTAAATTACTTAACCATATAGGGAGGTCTCAGAACATTTTCTGGTGTTCTCTAACGTCTCTGCTGCCTCAGCTGTGAAGTCACAGTGATAGTGGTACCTGACTGCCAGGAACTGCTGTGAGGCTGAAATGGGGGAGGGGAAATGGCAGTTCTTAGCATGGGGGCTACTGTAGAGCTTCCAGAAGCGACATACTGATGGGTAGCTCTCACCAGCACTTGTCAGGACTGGGCCAAGGCTGCATGATGTTGCCCTGGAAGTGCTTTCAGACTTTTAATAAAGCTACAAATGTTTTCACAGCCTCTTCTATGACGTGACGGATTTGTCTGGTAGGCTCTTAGTCACTAGGTATGAGAATGTTAAGGTATGCTTGGGGTGGGACTAGCCCTTTCCTAATGTCTGGGCTGAGCCCAGTAGGGCGTGGTGCCTCAGGTTTGGACTGAGATGGTGGTAGGTGTTTAGTTCACTCAGAGCTGGTGTCCAGATGTGGCTAGTTGGATAAGACCCAAATGTACATGTGGGGGTGACTGGTATGAATGAGACAGGTGTTTCCCCACATTGTACAGGACTTGGTCCTGGTTCAACCTAATGGGCTATGTCAATCACATAGGACTCGGTAGGCTGTGTCTTCTTAAGCATGTAAGAGCTTTGGAATTAGTCAAAAGTTGAGTACTTACAGCAAGACCAGTAGGAACTCTAGAACTCTGTGAACTAAACTCGTCTAGAGCACTAGGTGACTGAGACATTCTGCCTCTGGGAACCACTTTGTTAGGCTCAAACTACACTGATGACAAGTCTTACTCCTCTGTGTGTGAGCACATGTTTGTAGTCTTGATATACAGCCCCCAGTCCCTCCCCTTACACACAAAACCCACGTTTGCATGTGCAGTCCTCCTGAGTGCTAGGATTACTAGCTTGCACCACTACACATGAACCTACTTAAAAAAAAATGTCATTGACTATAGGAATGAAATGAGAACCTATAACTCTATAGTACTGTTCTTACATGTATTTGTACTATGTGCATGCCTGGTGCACACAAAACCAGAAAAGGACATTAGAGTCCCTGGAAGTAGAGTTATCAACAGTTGTGAACTCATAAGTGCAAGGAACTAAATCCCAGCCCTCTACAAGAGCATCCAGTGCTCTAACCACATGCCATATACGCAGCCTCCTATGTATATGTATCTGTGCGTTAGGTGTACACGTGGTGTGGGTGTCTATGGAGGCCAGAAGAGGACATTGGACCTCACAGAATTTGAGTTACAGGAGGCTGTGAGCTTCCAGATATGGGTGCAGGGAACCAAACTCTGGTCTGCTGGAAGAACAAGTGCTCTTAACCACTAAGCCAGATTTCTGCCCAACCTTTTCTTTCTAGTTTCTATGTTAGGGTTCCAGAGGTGCAGGATGTGTAGTATTTACATTAAGCTGCAAAGCCAAACCAGGGTTGCTGACACATTCTCCAGTTTCTATTTGTAATATACGCCTACATATTTCTCAATGTTCTCAGGAGTTGCTTTTTCCTTTAGTGTCGTAGCATGGTTGTTATCCAAACATGAGAGCAGTGTTTGTAAATATCTGAGCTTGAGCTGTACCTTTAAAGAAGCCTCTCCAGCCTCCCTCTGTGGCTTCACTTCCGTCCTGCCACATTTCCGATCCCCTCCCTCCCTCCCTCCCTCCATTTCTGGGAACCTGGCTTTTGCCATGGAATCACAGACCCCTTGGCTAGCTGTGTCCTTCACTCAGAGGTCACTCCGGGGCTGTAGGTGTTACTCGGACATTGTGATCTGGTGGTTTCTGTGATTGGCTTCACCTTAGCCACTACCGTGTGTTTGGACTGGATGAAACAGGAGGTCACTGGTTCACTTAGGAAACGACTGCCAGTGAACTCAGGGATCTCTTGGGTGCCAGGTTCTGGCAAAGAAGGGCTGATCCACTCTCCCGACAAGGTGTTTACAATGTGATGATCTTGACATTTGGGTACAGTAGTCTGACTTTTTGATAAATTGTTGGCAGTGAGTTGGGGCCCTTTTATTGTTGCCAGCTCAAGAGTCCAGTGAAGGGAGCATGTTGCTGTAGGCAGAAGTTTGATTGGAGAGGGCAGGGATACAGTGCCTTTCAAAGCTGAGTGTTGACACCCTGGCTGTTTTGGAAAACATGAATACAGTAGAACCCCGTAGTACTAAGAAGCGTTTGTATGGGGGTGAGGGGTCAGGGTGAGGGGTGGGGGACTATTCTTTTGGAAATGGAAAACTAATGGGGCTGGGCATGTGGGGCCTCAATGCTACTGTTCTGATCTGTTTTTCACGGCTTTACCTTTGGCTTGCTAAAGGCTGGACCTGATGTTGCCCCCAGCCATTCTGTGGCAAAGATCTTAGATCCCATTACCAAGGTCTTCTGCAAATTTATTCCCTTTTTTCACCTTTGAAGCCCAGGCTTGATTTAGCAGGAGCCTATGGGATAAAGAAAGTGTAAACTCTGCCCTTTGCTGTGTCCTGACTTTCTGGGACAGAGTTCCTTTTCTGTGTGTGAGTGAGGCCAGTGAGCACACTGCCTCACATCATCTGACAGGTTGTTTGCACTCTGGTCTCTACAGTCTGATGCCCAACTCAGCAGGAGGAGCTAGAGGTTCTCAAAGCTCCTCTGCATTGCAGAGGTTGTATCATGTTAGTGCTGATGTCCTGGGGTGGGGTCAGAAGCTTGGTGGCTTGCAAATAAGTGACACTTCTGACTAAAAGGGTTCTAGTTAGAGGTCAGTTTGGCCACTTGTTGCTCTCAGATTTCACTTGTGCAGTAGGACCTGAGTTTTTCTACTAGAAATTCTAGCACGTGGGTCGTAGCAGTGTAGAAGTTAAGTCTGGTGTTTGGTATCCTTGATTCTGGTGGCAGGTTATAAGAAACCTGGGTGTCTGTAAGAAATGTTAATTTCTTGAGGACAAAGACTTTGACTTCCATCTGGGTTCCCAGAGCTTAGAACATCTCCTGGCTTATAACGGCATCGCTGATTTGTTGGTCACTCTCTTAGGTAGGGTAGCCTCCTTTGTGGGGCCTAGTCTGCTGGTAAGGTCTTAATGGTCCTTCTCTACTTTGGTCACTTTTCCTATCCACTCTGTAGATTTTCAGAAAGTCAGAGCTGAAAAGAGAGGCTTGGAGTTCACTCAGACCCCTACTTGACTTATACACTGGAAAACTGAGGCACAGAGAAGAGGATGTGTCCTCAGCGATGCTGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTTGCTGCTCTTGCAAAGGACTTGAGTTCAGTTTCTACTATCACGGTGATTCACAGTCATCTGTAATTCCAGTTCTAGGTGCTCTGGTGCCTCCTCTGATCTCCATGGTCACCGAGCAGTCAGACATATGGTGCCCATGCATACAGGCAAAACACTCATACATATTACAACAAACAAACAGACAAACAAACAAACAAACACCACAGCTGAGGATAATAGGGTGAAAGTGTTGCAAAGCCTGGCAAAGCCGTGATAGACTGCCACACAGAGGGACCTGCCGCCTCAGCCACTCTGCTGCTTGAGATGCTCTCCCAGAACCTAACTGAGACGGTCCATTTATTGATTGATGTGTAACAAATGACCACAGAATTAGTGGCTTGAATCAGTATGTCATTTATTTTGTTCATAAATTGTAAATTGCATAGGGCTCATCCCATGACGTTTATCCCTAGTGCAGCATCAGCTAGGGTAGCCTAAAGGTTAAAGATGATGAAATGGGGTGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGGATGCTCTTTCAGAGGTCCTGAGAGCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGATGTGTCTGAAGAGAGCGACAGTACTCACATGCATGAAATAAATAATAAATCTTTTTTTTTTAAGATAACAAAATGGTTAGGGTCAGAATGATCTGAAATGACAGCATTAGCAGTCAGTGGGACCTCAGCTAGGGAATAAGGCCATGATTTTTATGTCATGATGCCTGAGTACCAAGAGTAAGAATCCTAAAAGAGCAAGACAAGGATGTATGTGATACTTTATGCCTTTAGCCTAAGAAGCTACGGGATTTTATGTGTGTGTTTGTTTGTTTGATTGACTGATTGATTGATTGATTCCCCCCCCCCCCATAGTCCTGGGGATAGAACACAGGGCCATGTATGTACAAGGTGTGATGGTTTGAGTAAGAATGTCCCCAGAGGCTCATGTATTTGAATGCTTTTGTCATCAGGGAGTGGCACTAGTTGAGAAGGACTAGGAGGTGTGGCTTTATTGGAGTAAGTTTGTCACTGGATGGGCTTTGAGCTTTCAATAGCCCGAGCCAGGCCCCATAGCACATTCTTCCTGATGCCTGAGGATCAGGCTATGGACCTCTCAGCACCTGTCTGCCTGTGTGCCACCGTGCTCCATGCCATGCTGAAACTGATGAAACCTCTGAAACTGGAAGCAAGACACATTTACATGCTTTCTTTCTCATAAGAGTTGCTGTGGCCATTCCTGTTGTGATTCCTTGATTAGATCTTGTCCTGTTGCCTGGGCATCTTATTTCTACCTCAGCCCCTTGGCCTTTTGATTCTGCCCTCTAAATTACCTTTTTTTAAAGCAAAAACTGTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGAGACAGGGTTTCTCTGTCTAGCCCTGGCCATCCTGGAACACACTCTGTAGACCTGGACATCCTGGAACTTACAGGGATCTGCCTGCCTTTGCCTTCCTGGTGCTGGGATTAAAAGCATGTACTACCAGGTCTTAGTAGCTTAAAAAAAAAAAGCTCATTGTGTGGTCAGCCCTAAGTGGCCCACTTTATTACTTCCTCGAAGGCTCAAGGAACATAGTGTAGGAGTGGGTGGAAAATATGTAAGAGCTAGAGGACCAGAAGCAGCACTGGGAAATGCTGTCTTCTAGACGTGAGTGGCCATTGCACTCAGGAGCTCACATCATCTGTGGTTCCCTGCCCTGAGCTATTAACACCGCATCATGGAAAGGGTGGCGCTCAGGAGTCCCCACTCCCCTAGGAGCTATGGTAGTTGGTGGCAGCTGGGGTAGGGAGTTATTTTTCTTCTGCTGTGTAACCCATGCTCCTATAAATAATCCTATACCCATGCTGATGCAGACAGCCCTAATTAACCTCAGTGGATTTTTTTTAATGAAAGTAGGAGGGTAACTTGTAAGGCAGAAGGGGTTCAGAGGGGGTGGAGTGTGCTGAGAGAAGGCAGTGGGCAGGGGATATGACAGAATGCATACAAGTTACCTTACCTATACTTTTATATGAAAAGGTAGCTCATTCTGGCCAGCAAGGGTCCTCAGAGAGAAAAGGAACTTGCCGCAAGCTCAGAGCTGAATGACCTGAGTTTAATCATTCCTGGGCCCCGCATGGTGGAAGGAGAGAAATAACTCCTGCAAATTGTCCTCTGGACCTCTGCACACAAGCACACATGAACACACACATGTATAAAATAAGAAGTATCTCATTCTTACAGATGATTAATTTCCTCAGTCTGCTTCATTGTATTTCAGAGATGCAAAGTCGTCTTTCCATTGTGTAGTGTCATCTGCTCTTTTCAGTTCAAACTCATGAACTTCCTTTAAAAACTTCCTGCCTTCCTTCCAAGACCAAGTGGGGCACAGATAGGGCTCAGATGTGTTTTGTGGGAGTAAAAAGGAGAGTTTACTCATAGACCCACAGCAACCTCTTTCTTAGATTTCTTGTAAGTCTCTGTAGACCACGGCCTGCTTGTAGCTTCAATGGAGGCCTGAGGCTTTCTGTATCCTTAAGGGTTCTTAATCATTTGAGATTGACCAGCAGTAAAGCCAATATGTTACCCCATGCTTACCTCTCTATTGGAACTCTTTTAGAGTGGGTTGTCAATGGAAGTTTTTGAGCTTTTAGGCCAAGAAACAAAATACTCGTCTTGCTGATAGGACTCAGGCTATGTTCCTCCTTTTTTTTCTTCCTGTGTTCACAGTACAGGGGTCACACTGAGAATGCCATTCCCAGAGTTGAGGCCATCATTGAGTTGTAGGAGAATGCTCCTACTCGGGGAGGCAATAGCCCATCTCGGATGAGCAGCCTTAGAATGGTTAATGCCTAACTCCAAGGCCGTTTCGTTTGAAGCACACTGAACACCAATTGAGTGGCCCCTCCCCCCAAAGAAGGCTCACTTTCTAGTGTTCACAACACATCCTGATGCCTCTGATAGGACGTGGCACCTAGGACTTTCTCCCAAATGCTTCCTTCCAATGTGACCTTTTCCTTTCTTATAGTAGTCCCTCTGGCTATCCCCTCAATCTCCCCCACTCCAAGTCTACCTGCAACTTCAAGGGAGCAGAGTTTAGAAGTGCACTGGCAGCCTTCTCCAAAAAAGTTCTGGGTGTACGTAGTAATATGTAGGGCATTTTTTGACACAAATGCTTCCTGCCGTTAAGAGAATCAGCTGTGCATGCCTGTAATCCAAGCACTTGGAAGCAGAGTCGGGGGATCAGGAATTGAAGGTCAACCTCAACCACATAGGGAGTTCAGGGTCAGCCAGGCACACAGGAGACCCTGTCCTCAGGAGAGAGAAAGGAGGAAAAAGAGAACGAAAGCAAAAGAAGGAAGGAAAGAGGGCCCACACTAGGGCTGGGTTACATTTGCAACAAAGGGACTAGTTTGCATTTTAAAGCACAACTTCTGTCTGCATGTGTGGAAGCATACACACACATTGCTTTCTCTTTAAATATGTTCTATTTCCATACCTCAGTTCATACACTTTAAAAAAAAATGACTTACTTGTCTTAAATATTTATCTCCATGCATGTGTGTTTATATTCTTACATTCTTTTCGATTTCCTGTGTACATTCCCCCACCCCCTTTGCTTTTATCTGTTTTTCTAACTCCCTGTCTCCTGAAAATGTTTATTTTGGCAAGTTGTTTGCCATGGTGTTGGCATCTGTGTCCGTGTCAAGCAATAGAACTGGCTGCCGCTGACAAGCCGTGGCACGTAAGGTACCCAGCTCCACAGTGGCTGCCTCCCCAGGGCAGGCTCTGGGACTGAGAACACAGTAAGCTGTCAAAGAGCAACATCGTGGGTGTGTATTAGTGGCTTTGTATTTGCTTTTGTCTGTACTTCTCTTGATGTTTGGGAATTATTCATAGTGTTCATTTTCATAACTTGATACCATCTTAGTCATATAATTGGTGCCTGGAGATAATTAGAAAAAATGTTTTATAAAGAACTCAAGATTTAGAGAATATAGGTGACCTGCAGTAAGCAAAACAAGGAACTTGACAGAACCAGATTCAGATGTCTAGGCGGTTGGTCTGCTATTCAGTTGTTGCTGTGTGGGGGAGGGATTTGGACTGACAGCCTTAGTAGTACACTCGATGTTTTGTATATCTTTCTGTGTTTATCAGGGACATTTATAGACAAAGGCTAGAGCAGGCATAAAGGAAACCAAGGTTTTCACTGCTTATCTTTTCATTCATTCGTTCATTCATTCATTCAATCACTTACTCACTATAAAAGATTATTACATTTAGGTGCAGGGGATAACAAGATCTAATAGGACAGTGTCATACTTTCAAATAAGTCTATTTGTGACTAGTTAAGGAGATATGTTGGTAAACAGTCTGATATAGACATGTCTAGCCTGCAGCTTATGATCCACATATATCCCAGGATACTTACGAATGTGGCCTAGTATATTTATAAATGACATCACGTTGTAATGTCAAGGTTGGATACCCTTGTAAGTATTATATCATAATAGATATTTTTCTAGCCACAGTGGAGGGATTAAAAATTGGCCAGATCCACCTGGGTGAAGCGAGTAGCGTTAAAGAAATCTAGAGGCTTGACGTAACTTTGGCTGGAATGCAGGATTGGTGTGGAAGGATATACAGTGTGAGTAAAAACCAAATCATGGGGACCCTGTCAGCCTTGCTTTTAGTCTGCAGATACTAGGGGATTTCAGCAAGATGAGAAGATGGACTAGAACAAGGTTCAGACTAAGGCAAAGGGAAATCAAGAGAATGTTTTCAGTCCTGGTGGGAAGAAAAGATCTGAACAGAGGAAGTATCAGCAGCAATGGGAATGGGGGTAGGGGCTGTGAGAGGTGTGGGGAGCAGGATTGATGGGATGGAGTAGTAGGTGTGTTGGGGAGCAGGATGGATCCGGATGTGAGGAGGAGGAGGAAGAGGAGGAGGAGAGAAACATAGACCTTTTGGCCCTTCATTATCTATAATGGTAAAACCAGAGATAAGGAAGCACAGAATGGCATAGGGATAGCTCGGATGGATGGCCAAGGAAAGCCAACTCTGTTAGGTGGCACACACAGAAAAAGAAAGAGAAGGTGGTAGGCATTGTCTTTCTGCTCTCTGCTGAGTCTGAATGCCTACAATAGTGCCTGGAGTGTACCTGCTATAGAGTATACTGTGTGAGTGAAGAGCCAAGCTGTGCCTCACGCTTGAGGTGTGTATAGATGCACACGGAGTCACTAGGGAGCTGCCTGCTAACCTCTGAATTGGAACCAAGGGGCCACTAGTTGCAGTGTGTCTAGAGAATGAAAGCACCGGAGTGGGAGACCAGACACCAAAGAAGGGTTTGCCCTTGTGAGTACCTCTGGATCCAGGTACTGGTTAGCTTAGTCATCATTTTCTCTCACCTGACAGGCAAGGAATTGCCTTACTTTCTCTCTCAATCTGTTTAGGGATAAAAGACAACAAAATGAACCAGAAGATCAAGGCTGAGTGTTATCTTATGCCAGGGATGCTACCTGATGTGTAGACCCCTTTTACAAAGATTCAAGCATCCAGACATCTGTCCACAGTGTTGTATCTTTCTTTAAGCCTTCTGTGGGAAATGGAGATTCTTCTGAGCCTGCCCCTAACCTGGGAGCAGCGACCTGTGGCGGCACTTCCCCTATCTCCACTGAGAATCACCAGAACAGAGTCCTCTGTGGAACCCAGTGACTTATCTTTATAGGGGCCCGGATTAATCCCCCCTTTTTAATCTGTGCCTTTATAAAAGAAGAGAGACTAGGGACTCCTGACCATTGTGCATAGGCTGGGGTCTCCTTAAGCTCACTGCTCTGCCAGTGCCTGCTACAGAGAGCTGAGGTGTCTCTTCCCACTTACTCGCTGAGCAGGCTCTTTGTTCATGAGCTTGGCTGTGCACTACAGTTCTCTCGTCTGTGCCTGTGTATGTGTGCGGGTGGCTCTTGTTTGACTTGCCCTTTTAAAAACAACTTAAGCATACGAGGTTTTCTGTTGGTCGGGTCAGTAAAGGCTGTGGCCTAACAGGGAATTGTCAGCCAATCCGTGACTCACCAGAGCTCCAGTTTTGTATGTGAGCAAGTGGTGACAGCCACTGGCTCAGGAGCAGCTGGCTGCTGTCCTAGAGATGGCATGACACTTTGGAGGCTGTGAAGCTGTACAGCCCAGTTTTTGATCAGTCAAACCTTCTGTGGGTTCACTGTTAGCAAATTCCTACCACCGTTGAGCTAATACTGTTTAAGAAGAGTTCTCAAGGGTTGACAGTGATTATCATAGTAGACACCAGAAAATGCACTGGGAGGATGCCCGCTCATAGCTCTCTTCAGTAAGCTCACTCACCTCTACCTTTTCCTCTCATTCTTGCTTAACATTCATACAGGGCTTTATAGATACAGGCCACATGCCTTAGACAAGATCTCTAGCAGAGAAGTCCCCTGATCCTTATAAATATTGTGTTCTAGACTGGGCTGTGTCCAGGGCCATGGAGGTTTCTGGTGAGCTATGTTTGGTGGAAGAAGTTACTGTTTACTGGTTGTTGTTGGGTTTTTTTTTAATTTCTCCATTAAAAAGTTTTAAAATTAACATATAATTTGATTACAGACTTTGAATACATACATGTTTTCTATCACCCTTTCTTTCTACCCTAAACCTCTTCTTTTACTTTCAGAGTCCTTTTTCTAGTTTCGTGACCCCCATAGTACATGTGTTATGGATGAATGTATGTGTAATCTTGGATCTGGATATGAAGAGAAAACAAGTAGTTCTGCATCTGGGTCACTTTGCTAATATAAAAACTTCAAACAGCAACAGAATATTAAGCCAGATGTGGTGGCTCAACGCCTTTGATTCCAACACTTGGGAGGCAGAAGCAGGTGGATCTTTGTGAGTTTGAGGCCATCCTGGTCTATAGAGTGAGTTTTATGAGAGCCAGGGATCTTTTAACAGAGAAACCCCATCTCGAAAAGCAAGCAAAACAAAAACAACAAGAACAACAACAAATTTCTAATTCCGTCTGTTTTCCTGCAGATACCATGATTTCATTTTTCTTTAAGGCTTGAGTAAAATCCCATTGTGTGTATGTATCACATTGCCTTAGACGATTCATCTGTTGATGGAGATCTAGGTTATTTCCACTTTTTAGTTATTATAAACAGCACAGCAATAAGCATGGGTGTACAAGTATCTCTGTGCTAGGACTTAGAGTCCTTTGGTACTGTCTTCTCTTTAGAGAAAAACTTGGTGTAGTGTAAATTCATATTGTGGCTTCACTACTTAACATGTAAGGGACCTTGGGTGAGATATGTAATTTCTCTAAGTCTTCTTCTTGTCTTTTTATTTCCATCATGAAAATAGTAATGTATAATAATGAACTAATAGAGTTTTCATGAAGGTAAATTGAGTTCATGTCCTTAGGAACATTAGCTGAGATCTGTGTATGGATTTCAAGATGGCTTGTTGGATATGAAGCCACTCTCATAGGGTAGAGCTACGTAAAAACCTTCTGAGAGAGTGGAAAGGACTCTTTCTTGAGGGGCCTGACTAACCTTTATAAATCCACTGGGGATCCTAATTCTTGTCAGGATAGTAGGATCTTGTAGTAGTAACACAGTCTTAGGGGAGACATCCAAGGGTTTAAAGAGCAAACAGTTTTGGCATATATATTTGGGAATACTTTAGAAAGTAATATGTTGGGGCTGTTTTGCTGCAGTTCATGAGAGTTGTTCATTAGCATCTCTGCTCATCTGCATTCACTGATACCATGTTCAGGAATATTTATAATGTAAAAAGCACTGTGTGCTTTCTTCCAAGAGGGCCAGTTGGCCATGTAGCAGTACATGTTCTTACTGTCTCTAGTTGACAGATTCTCTGGTTTATTAAAGAATAGGCTTCTGCTCTGTGTATTACTCAGGTCTCTGAGAATGAGCGAGACAGAAAGGTTCGTGGAGGTTGGCCTGCCGTGACTAAAGAGCTATTCTTTACTTGAGGACAGCCTTAAAGATACATATTAAATGAAGGATTTCTTTTCTTTGTTTTGGACATACTAACTCAAGCTGGCCTCAGACTCACTGTGTAGCCAGTGATGACCTTGAACTCACAATCCTCTTGCCTTCATCTCCCAAGTGATGGGATTGGTATGGGAGGGGGCACTTAGAGTATTTTTGAGACTTCTGCAGGAACATAACATCAGAATGAAACACAGTCCCCCTGGTTTTTAGACCACTCACCCTTTTCCTTTTTCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCTTAG
Seq C2 exon
GTCTCAGTCAGTCTCTCCACCTCCAGTTTTATACCCACCAAGAAGTCCCATCTACCCACTCAGTGACAGTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCTAAATCCCAGGTGCTCCTCAAGGACCGGCATTCTCGAAATCCTTCACTCCTAGGTCAAGATCCGTCCCCAGAAACCTCACCACCCATTTGTACCCTCAAGGCTACCAGCTTCAGCTATTTGGACAGAACCCCTTCATTACGCAAAAGAGAGGACCAGAAGGAGACTGTCCAGGGTGCAGTCCAGGATGTAGAAGGTGTGGCTGCTTGCCTCCCCCTTGCCCAGAGCACCCCATTCCTAGGGGCCGGGTCTCGGAGTGTCTTGCTGAGTTGCACTGGTACCCGAGCCCATAGCCTGGGTATCCGAGAGAAGATCTCAGCATGGGAAGGTCGCCGAGAGGCTTCACCCAGGATGAGTCTGTGTGGAGAGAAGCGGGAGGGCCCTGGGAGCGAGTGGTCGGTCAGTGAGGGCTGCCCCAGTGTGGGCTGCCCCAGTGTGGTGCCATCCCCCTGCAGCTCAGAAAAGACCTTTGATTTCAAAGGCCTCCGGAGGATGAGCAGGACCTTCTCTGAGTGTTCCTACCCCGAGACAGAGGAGGAGGCAGAGGCACTTCCTGGACGGGACTCTTTATACCGGCTGGAGAAGCGTCCAGGCCGGACTGAGCCCAGTGCCTTGCTCAGGGGGCATGGCATCAGGAAAGAGAGCTCAGCAGTGCTGAGCCGGATCCAGAAGATCGAACAAGCCCTAAAGGAGCAGCCTGGCCGGGGTCTCCCCCAGCTCCCTAGCAGCTGCTACAGTGTAGACCAAGGGAGGAGGAAGACTGGAACTTTGGGCACCTTGGAGGAGCCAACAGGAACTGCAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAGTGGCCGGAGTTGCTGGGGAGGCAGGCCCACCCCTGGACAGGGAAGGCAGTGCTTCCATGAAGTCAGAGACCCCTGGAAATAGCTCCAGTCCCCAGCTGCTGCCTCCGAAGAGCTCCCCTGATCCAGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCTTTGAGTACGAGGCTGACAAGAATCCTAAGACTAAGCCAAGCAATGGTCTACCTCCTTCACCCACACCTGCTGCTCCACCCCCCTTGCCTTCCACCCCAGCCCCACCAGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGGAAGTCACAGAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000031024:ENSMUST00000077909:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.763
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types