RnoEX0101734 @ rn6

Exon Skipping

Gene

ENSRNOG00000020356 | Zfp846

Description

zinc finger protein 846 [Source:RGD Symbol;Acc:1564241]

Coordinates

chr8:21614395-21617736:+

Coord C1 exon

chr8:21614395-21614466

Coord A exon

chr8:21614910-21614992

Coord C2 exon

chr8:21616408-21617736

Length

83 bp

Sequences

Splice sites

3' ss Seq

GCTTTTCTGTTTATCTTCAGAAT

3' ss Score

10.13

5' ss Seq

ACAGTAAGA

5' ss Score

5.96

Exon sequences

Seq C1 exon

GATGTGAGGTCATCAAACCCAGTCTGATCTCCTGGTTGGAGGAAGAGGATTTGCACAGAGAAGATCTCCAAG

Seq A exon

AATGGGAAATGCCACTTGGCACCCAAGAGTCAACATTGCATCAGGATTTTTTGAGGGGACAGACTTCCAGTGGAGTACAAACA

Seq C2 exon

GGCAGAAGCCACAGTGCACGAGAACTCTGTTACTATACACAATGTGGAGAAATTTTCAGTGAACACTCATATTTCAAGACACATGTGAAAACTCACAGTGCGTGGAACACCGGCCATCTCACCCACTCAGATCATGATGCCTCTGCTCAAGTACACACCATAAAAACGTACCCGTGTAAGATTTGTGGAAAAGCCTTTGGACGGTCTTCAAATCTCAACAGACACCTGCGAAGCCACACTGGAGAGAAACCCTATGAATGTAAGGAGTGTGGGAAAGCCTTCACTACCTACTCAAGGCTAGTGGAACACTTTAGAACTCACACTGGAGAGAAACCGTATAAATGCAAGGATTGTGGGAAAGCCTTTGCTAAGCGGTCAGGCCTTATAACACATATATCAACCCATGCTTCAGAGAAACCCTTTGCATGTAAAGAGTGTGGGAAAGCCTTTGCTTCATCCCCACGCCTTAGTCAGCATATAAGAATTCACAGTGGGGAGAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000020356_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.080 A=0.250 C2=0.025

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9)

Main Inclusion Isoform:

ENSRNOP00000063156