RnoINT0041727 @ rn6
Intron Retention
Gene
ENSRNOG00000015902 | Cpxm2
Description
carboxypeptidase X (M14 family), member 2 [Source:RGD Symbol;Acc:1310955]
Coordinates
chr1:204067058-204078201:-
Coord C1 exon
chr1:204078113-204078201
Coord A exon
chr1:204067182-204078112
Coord C2 exon
chr1:204067058-204067181
Length
10931 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGA
5' ss Score
10.77
3' ss Seq
TCATTTGCCTTGTGTTTCAGTTG
3' ss Score
9.85
Exon sequences
Seq C1 exon
ATCCTAATAACTATTATCACCGACGTAATGAGATGACCACCACTGATGACCTGGATTTTAAGCACCACAACTATAAGGAAATGCGCCAG
Seq A exon
GTAAGACCACAGTGTGGGCATTTGACATGACTTTTTCATAGACCATAGGGCATGAGCCAATATGTATCACTATGTATGATCCCTCTTGGCAACCAAATGGGGACCCCTTTGGTAGGAAATAGCTGAAATGGGGCTCAAAACTAGAGTTTGTCACCGAAGTCTTTAGTTCCTAATGCTTGTGTATTTGAGCTGGGTCACTGGATGAAGGATGTTAATCATTGTAGACTTGAGGGTGAGAGGGTACTCATGGTAAAACAGTAGGCCTTCTCATGGGTCTGCATGGTGTGTTCCACAGTTGATCTCCTTTAATGTGTTCAGTCCTTTTAAGAGCCCAGGATAGTAGGGGCTATAATTACTTTCTCTTATCAATGGGGAAATTGAGTCACTGTGCTACTACATAGCATTATTACCTCTTACCACAATATTCAGACTTTTAGCTTAATCTTGGTTGTCCACCAGAGTGACCTGGAAATTTTTTATTGGTTATTTTATTTATTTACATTTCAAATGTTGTCAACCTTCCTGGCTTCCCCTCCAAACCTCCATCCCACCCCCACCCCTATTTGCCTCTATGAGGCTGCTTCCCCACCCACTCACCCATTCTATGCTCACCTCTCTAGCATCCCCATATGCTGTGGGATCAAGCCTTCACAGGACCAAGGACCTCTCTTCGCATTGATGTCAGATAAGGCAGTCCTCTGCTACATATGCAGCTAGAGCCATGGGTCCCCCTCCATGTATACTCTTTGGTTGGTGGTTAGTCCCTGGGAGCTCTGGGTGGTCTGGTTTGTTGATATTGTTGTTCTTTCAATGGAGTAGCAATTACCTTCAGCTCCTTCAATCCTTCCCCTAACTCTTCCATTGGGATTCCCATGCTCAGTTCAATGGTTGGCTGTGAATACCTGCATTTGTATTGGTCAGGTGCTGGAAGAGCCTCTCAGGGGACATCAATACTAGGCTCCTGTCAGCAAGAACTTCTTGGCATTAGTAGTAGTGTCAGGGTTTGGTGTCTGCAGATGGATGGATCCCTAGGTGGGGTGGTCTCTGGATGGCCTTTCTTTCAGTCTCTGCTTCACTTTTATTGTACCTGCATTTCCTTTCGATAGTAACAACTCTGAGTTAACATTTTTGAGAGGGGTGGGTAGCCCATCCCTCAACTGGGGACTGTGGCCATCTACTGGATATGGTCTCTACAGGTTTTCCTTCCCTTTTGTTGGATATTTCAGCTAATGTTATCCCCTTTGGGTCCTAGGAGCCTCTTGTTTGCCTGGCATCTGGGACTTTCTAGTGGCTACCCCCAGTTCCCCATCCCCCACTGCTACATATTTTTGTTCAATTTCTTGACCCTCTTTACTCTTTACTTTCTCCCTGTCCCTCTTCCTATACCTAATTCCCAACCTTTAGTCACTCTTCCAAACTCTTCTCCCTTTACCTCCTGTGATATTTTGTTCCCCTTCTTAAGTAGGATTGAGCATCCACATTTTGGGTCTTCTTCTTTTTAAGCCTTCATATGGTCTGTGAGTTGTAATAGGTTATTCTGAGCTTTTGGGCTAATGTCTATCTATTACTGAGTACATCTATCTGGAAATTTATAAAAATTAAATGGAAAATTATAGTCCCTCAGACACAGTGAGTGAAAATCTTAGTGGAAGTGTTCTAGAGTTGTCCAATGCGTCTGTACAGCCAGACCTCAGAACTAGTGATTGGCATTTGTTAGGAATTTGATTTAGGTAGCAGGAAATTGGTGATCAAGTGTGGTTTCTCAGACTGACCCTGGCATCTCAGTTAACTCTTGGTCAGACACCAGTGAAGTGAAAATCTTAGTGGAAGTGTTCTAGAGTTGTCCAATGCGTCTGACAGCCAGACCTTCAGAACTAGTGATTGGCATTTGTTAGGAATTTGATTTAGGTAGCAGGATGGTGATCAAGTGGGTTCTCAGACTGACCCTGGCATCTCAGTTAACTCTTGGAGCTGGGTCCAAACTATGCAGTGCTGGCTGCAACACATCCCTGAGAAGGGAAAAAGGACAGACGCCTGACTTGGTTTAACTGTCTTTGATGTCCTGTCCCTCAGTTCACACCCAGGCATGAATATTGCATGTTTCCTGGGCAGACAAAAAGGTTGAATGACCTGCTCCCCTCGATAGGGCACCAATGAGAAGGAAATTGATTTCCACGAAATCCAACTTACTAAACCCGAAGAGTTTATTGGGCTTACCGTACAGAAATATGAGTTAGGGGTTACTTATAGGAAGTAGGAGACTAACCAGATGCCCCAACAGAAGTTTCAGCCCAGAATAAATAACAATTTCTTCAATGGCTGTGGTAAGGCAGAGTCCTACAACACACACTTAACCTTCTGCTTTCTATATAGGTTTCCAGCACGTCAAGACAGGACCACTTGGAGCTAGAATAGGAATGGAATACATTCACCTGGCAGGAGGAACAGGAGGAAATGGCTGGGCCCTCCCAGACAGACAGTCCATGGTCCTGGCTCCTTCCTCACCTATGAAGGAGAGACAATGGTGCAATGGGCTGATCTGAGGGTCCTCTAGTTTGCTTTGTTGAAAACAAATAGTGACTGGTATGCTCGGAGGACAGCTGTCTACAACACTGTGCTGGAAAGTATGCAAAGGGAATTGACAATTGGATGATCCTTGAGCTACCCAAGAGTCTGACTAGAGAATAATGGAATAAGCAGAAATAAACTCAGGATGTCATTGGCAATAAGGACTCACCAACAGCTAGTTAATGCCGCCTCAGAGGAGTCATTGTGGCTGAGGACACACACACACAGGAAAAGGTAAAGATGTTCTGAGACAGAGTTATCAGACACACACACCATGGAATAGCATGCCTGGCTTGTCTCTCTGGTCATTTACTTGAGTACCGCATGGCTGTCCAGACACCTGTCAGCACAGACAGAGAAGTGGGATGTGCTAAAGAACTCTGCTTACTGTCTTGCTCTTCAAAAACCAGAGATAATGTCTGGACTTGAGGTTTGTGGACTCATGCCTGCCTGCTCCACTTTCTCAGGGTATTTTTTAACTCACACACAACCCTACACACGGAGCTCAGGATACACAGCCAACATACACAAGAGCACCCTCTTCACGCCCAGAAGTGAGACAGAGGTATCAGGTTCAGGGTGGCAATAGTCAGCTTCAACTGTATATAAAGTGAGGATGACTGCCTTAGAGTTCCCTACTGACTGAGCCCGTGAAAACAGCTATCCTGGGCCCCTCTGGGAGAGCTAGCAGTATGTGCTTTATTACATGAGATGGCTATATCCCACACAGCAGACAAGAGGACTCAGGTCACCAATAAAGCCACCCTGGGTCTCCTCCTGAAGTCTTACTGCCGCAAGAATCACTGAGGTTTGGAAACTGTCCAGGGAGCATTTCTCAGTCCGTAGTTGAGTACTTGGGACAGAAGCCATTGCCAATGTAGATTGGCTGTTCTTTGGAGTTGGATGAGAAGACCTAAATTGCTAGCCCTCTCCCTGAATGGAGTCCTTCTTAGGTGGCTGTAGGAGATATTTGTACCTCAGAGAAGGAGTAATTGGCTTAGCCGTACTATGGGAAAGACATACACACAAAATGAGGGGCAGCAATAAGGGAAGGAACCAAAAAACAAAACAAAACAATGGAGATGCTCTTCACACTGTGAGAGGACCAGCAATGAGAGTGTGGGTCACTCCCATGCAGCTAATGCCCTTTAGAGTAACTGAGATGACATGGGCTTATGTTCCCAGCAAGAAGGCAAGAGAGGTGGTTCCCAGCAGAGGGAGAGGGCAAGAGGTGGGGGAAGGCAAAAGAAGATAGGTGGAAGACTACCCCAAGCATCCAGATTTTAGGCAGAGTCCATGCCAAAGGAACATTGAGGCATTCCGTAGTGTGTGTGAATGTATAACTTCCTGGTTACGTGTTAAATATACAATTTTTTTCATCTCACACAACTTGGAATGATGGGGCCATGTCCCTACATTTAGTCACAAGTCCCTATAATATGAAAATTTAGCCATACACGTGCTTCATGTCATACATTGCAGTCATAAAACAATGGGGGACAGGTGAGTTGNNNNNNNNNNNNNNNNNNNNNNNNNGACGGGTCGGGTGCCGCGAAAAGAGGGTGTGCCCAGAAGAATTTACCGCACCCTGTTGCGTCCCGGTCTCCCAACTCTGCCATGCACCGTTGACTCCTGTGCATATATTTTGTTCGCCCCTTCTAAGTAGAGTCGAAGGATGTCCCCATTTTGTGCAGTCGCTTTTTAGCAGGTTTACGGGTGATGGCGTGAGCAGTATAAGATAGATCTGCGGCTTGTTGCGTCAGGGTGTGTGTGCGAACTAGCGTGAGAATTTAGCAAATATGTATATGTGGGTCACCTCAGACACAGTGAAGTGAAAATCTTAGTGGAGAGTGTTCTTAGAGTTGTCCAATGCGTCTGTACAGCCAGACCTCAGAACTAGTGATTGCAGTGGTAGGATTTTGAGTATACTCTGAGCTGTGTCAAACTATGCATGCTGGCTGCAACACATCCCTGAGAAGGGAAAAAGGACAGCGCCTGAACTTGGTTTACTGTCTTTGATGTCCTGTTCCTCATTCACACCCAGCATGAATATTGCATGTTTCCTGGGCAGACAAAAGTGAATGACTGCTCCCCTCAGATAGGGCACCAATGAGAGAATTTGATTTCACTGAAATCCAACTTACTAAACCGAAGAGTTTATTGGGCTTCCGTACAGAATATGAGTTAGGGGTTACTTATAGGAATGTAGGTGAGACTAACAGATGCCCCAACAGAAAGTTTCAGCCCAGAATAAATAACAATTTCTTCATGGCTGTGTAGGCAGAGTCCTCCAACAACTTCACTTAACCTTCTGCTTTCTATATATTCCAGCACTTTCAAGACAGGACCACTTGGAGCTAGAATAGAAGAATTACATTCACCTGGCAGGGAGGAACAGGAGGAAATGGCTGGGCTCCCAGACAACAGTCCAATGGTCCTGCTCCTTCCTCCTATGAGGAGAGGTCAATGGTCAATGGGCTGGATCTTGAGGGTCTCTAGTTGCTTTGTTGAAAACAAATAGTGACTGGTATGCTCGGAGGACAGCTGTCTACAACACTGTGCTGGAAAGTATGCAAAGGAATTGACAATTGGAAGATCCTTAGCTACCCAAGAGTCTGACTAGAGATATGGAATAAGCAGAAATAAACTCAGGATTTCATTGGCAAGTAAGGACTCACCAAAAGCTAGTTAATGCCCCTCAGAGGGAGGTCTTGTGGGCTGAGGGGCAGAGCCAGCTGCCGGAACAAAGGTAGAAGATGTTCTGAGATCAGAGTTATCAGGCCGACCTTCAGTTCCATGGAATGAGCATGCCTGGCTTGTCTCTCTGTCATTTAACTTGAGATACGCATGGCTTCCAGACACCTGTCAGCACAGACAGAGAAGTGGGATGTGCTAAAGAACTCCTCTTACTGTCTTGCTCTTCAAAAACAGAGATAATGTGCTTGGACTTGAGGTTTGTGACTCATGCCTGCTGCTCCACTTTCTCAGGGTATTTTTATGACTCTGCCCACCATTCTGTCTCCGGAGCTCTGGTGGGTTAACACAGCCTTGCTTGATGAGTGTCCCAAGGCACCTCTTCACGCCCAGAAGTGAGACAAGTATCAGTTCAGGTGGCATAGTCAGCTTCAACTGTATATAAAGTGAGATGACTGCTTAGAGTCCCTACTACTGAGCCCGTGAAACAGCTATCCTTGGGGTCCTCTGGGGAGAGCTAGCAGTATGTGCTTTATACATGAGATGGCTATGATAATTCCCGCTCAGGAGATAGCAGAGCTAAGAGGACTCAGGGTCACCAATAAAGCCACCCTGGGTCTCCTCTGAAGTCTTACTGCCCAAAATCACTGAGTTGGAAACTGTCCAGGGAGCATTTCTCAGTCCTAGTTGAGTACTTGGGACAGAAGCCATTGCCATGTAGATTGCTGTTCTTGGAGTTGGATGAGAAGACTAAATTGCTAGCCCTCTCCCTGAATGGAGTCTTCTAGGTGGCTGTAGGAATATTTGTACCTCAGAGAGGATAATTGGCTTAGCCTACTATGGGAAGAGACATTTATAGCCAACAATAAAATGAGGGGCAGCAATAAGAAGGAACCAAAAAACAAAACAAAACAATGGAGATGCTCTTCACACTGTGAGAGGACAGCAATGAGAGTGTGGGTCACTCCCATGCAGCCTATGCCTTTAGAGTACTGAGATACATGGCTTATGTTCCAGCAAGAGGCAAAGAGGTGGTTCCAGCAGAGGGAGAGGGCAAGAGGTGGGGAAGGCAAAGAAGAAGGTGAAGACTACCCAAGCATCCATATTTTGAGGCAGAGTCATGCCAAGAGAACATTGGAGGCATTCCTAGTGTGTGTATTTATAACTTCCTGGTTACTTGTTTAAATATACATTTTTTTCATCTCCTTCACTTGGAATGATGGGGGCCATGTCCCTGTCATTTATCACAAGTCTATAATATGAAATTTAGCATACACGTGCTTCATGTCATCATTGCAGTCATGACTAATGGGGGGACAGGTGAGTTGCTTGCTCGTGGCTGAGAGAAGCTTTGGTTATAGCTGGGACCAGTTGGTATCTGGATCATTGACAGACTTTAGCAGATAGAAAAGGAAGAAGACTGTCTCTGTCCAAGCAAAGAAGTCAGTAAGTAAAGGAGCTAAAAGGCGCGTAGCCCACGCGGTATCATGTCTGGCTGCCTGGGAGGCAGCACACGACAGGTCGCGTGAAGTGAGCTGGTGGTTCTCAGCGACATGTGCGCGCTCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTACAGACACACACACACACACACACACACACACAAAGATGTGTCAGACCTGGTGAACCTGTTTCTTCAGCCCTGTGTGCTCTGAATCCTGAGGAAATACTACTCCATACTCCGTTTACAATCAGAACCCATATATTTACCATAAAGGCCTTATTCTGGCTTGGTTTTTGTTGCTGCATTAAATACCATGACCATAAGAAACTTGGAGAGGAGACATTCAGAGATGTCAAGGCAAAATCCTGGAATCAGGAACTATAGTAGAAACTAAGGAGGAATGTTGCTTACTGGCTTGCTTCTCCTGGCTTGCTCAGCTCCCTTATACAGCCAAAAGTCATCTGCCCAGGGATAGCTGAACCCTCCTACATAAAGTAGCAATCAGGAAAGCATCCTATACATATGCCCACAGACCAGTCTGAGGGAGGAGGCAGTTCCCAGGAATGTCAAGCTGACAGTCAAGATTAGCCATCACTGACCTGGACATCATAAGAAGAGTGCTCTTTTCAGGACCAAGTAGTTACATTTACTTGGAGTTACATTTAAATAAAAGGGCTCCTCCCCTGAAAATGTGCAACGTTCCCGTGTTTGCAAAGAGAAAGCACATCCATTCTCGTGACCTTCCTGGGAATGGTGCCACCCAAGATAGTCTTGGGGTATTCCAGAGTGATACTTAGGTGGGAGAATTATAAAGGGCCTTCCCAAAGGTTAATATTCTTCAGATGTTCGTGTTCTTCTGAGGGAAGGTTGATTTTGGTATGAAAATCCAGTTACACACAGTTTATTTAACACCAACTATGGCAGAGAAAGTGGGATTGGGATAAAGTACAAGGAAGAAAGGAGATTCTAAAGATGTGTAGCCCAAGAGACTTCTTGTATCCATTGCTAAATGTGTCATGGTGACTGTCCGGGAGAAGATGACATCAGTCTTCCTCCAGCATGTAGGGTGCTTCAGCGCTAGCTTCACTAAAGAGAGACAATAACAGAAAAGGGGAGCCAGGCCTGTGCTTGAGGCTTATATCTGTTACCAGGTTAGCAACGAACTACCTAGACCCTTTCCTGAAGAACTAATCTTTGGTTTGAACTCAAGACAGTGGTTTACTTGACAATCAGGACCTGCTGAGGTCCTCGTCTGCATGTGACTACACTGGAGGGACTAGGCAGGGACTCCAGTGAGTGTGCTGTGGCCGTCTTTCATGCTTCAGAAGAAGAAAGGGGCACATGCAGCTCCATCCTGTATTTCAGAGTGGCAATGCCCTTCTAATGGGTATGACTGTCCATCACCCTTGCCAGGATGTTCTCCTCTGCTCTGCCAGTGACTTAGTGTCCCTTCTGTTCTTAACATATGGCCCTGAAATGATTCTTGAAACTCTCCAGTCTTTATTCTCTGTATGGTGTGGTGGGGAGCGGGATCCTCAGTAAATGATAGAGAAAACAGTGTTCTTTAATCCAGGGTTTGGTGCCTTGGGATTGAAAAAAAAAAGTCTCACCCAGCAAATCAGTGCTCATAGGCACCAGTCAAGGATGTGAGGTAAGGCAACCTCTGGAAGGGGTATGTCTCTTGTCCCCTGCCCCCAAAGCTTATTCTCCTAGTAGAGCTCTCATTGCCTTCCCTGATAGCCCACATCATTCTACAGACTAAAGCTGTCTGTAGACGAGCTGATCTTAAAGTCACAGACCATGGTGTGTGGGTTCGATCACCATTTGGCCCTATGAGGCTTGTGTCCATGGCCAGCACATGTGGTCCTTACTTAGCCCTTATGAACTGAATCATCCCTTGTCTCTTTCTGCTGCACCACCAGCTCCAGAAGGGCAGGAACACCTTCTTCAGGTGTGCGGTGATTATGAAAACATACTATCAAATAATTCCTATTTGCACAATTTGATCTCCAAGGAGACTGATTCAGACAGAAGGAAACCACAGTGTGAAAGTCATGGCCACAGCTAGGAAGGTGCAGACTGCAGCTAAGGAGCTGATGACAGAAACCAGGAGGGTGATAACCATGTATCACATCTGAGAAAGGTGAAGATCCCAACCCAGGATGATGCCTTACTCTGTTGAAACTGTTGGAGCGGAAATGACAAGCAGCTTGCTAGTAGCCAATAGAAGTGCCTTGTTTGTAGTTCTAGAGGCTAAAAACTTAAGCGCAAGGTGCTGGCAGATAGGTGCCTACTGAGGGAGAGCTCACCTACTAGTTTATATGTGTATCTGGCCTCTCCACACATATGGAGAACACAGATCCTCTGTCACCCGTGTGACATAATTAACATCTAATGCTTCACTTCTTTTTATAAAAAAATTATTACGTTTATTTGTAAGGTATGTTAGGATATGAGCACACGCATGCATCCGTGCACTTGCTGCAGTCACATGACATCTTGTGAGAGTTGGTTTTCTCCTTCTAGTATGTGGATCCCTGGGATAGAACTCAGGTCATGGTATTCACCTACTGAGCCGTCATGATGGATGCAATGCTTCCCCTTTTAATTCTCTTGCCTCGATTGGATTTCAGCTGAGGGACACAGGCATTCAGTTTGTAGCAAGAGACTGTAGCTAGAATAATCAAGTATGCTAGGAGTACAGGACCAGGACAGGCAATGGCCAAGAGCTTCTTCTTAGGGTCGATGGCCAAAGAATATGTTCTGGCTGGAAAGGTGGGTGTTATCCTGGGAAAAAGGGGGCCAGGGATGGTATTCTGGACAGGTACAGTAGTAGGGCTGTGGGGAGGAGGAGAGTGCTGGGGTAGGAGGCTGTGGCAATTGCTTCCTTTTGGTGGATGCTGCTTTTTTTTTTTTTTTTTTTAGTGTAGAGTCATCACGACTCAAAACCTGTCATTTGCCTTGTGTTTCAG
Seq C2 exon
TTGATGAAGGTTGTGAATGAGATGTGCCCCAATATTACCAGGATTTACAACATTGGCAAAAGTCACCAGGGCCTGAAGTTGTATGCAGTAGAGATTTCTGACCATCCTGGGGAACACGAAGTTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000015902:ENSRNOT00000051853:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.333 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0024619=Peptidase_M14=PU(0.6=6.7)
A:
NA
C2:
PF0024619=Peptidase_M14=FE(13.3=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]