RnoINT0061055 @ rn6
Intron Retention
Gene
ENSRNOG00000027230 | Fhod3
Description
formin homology 2 domain containing 3 [Source:RGD Symbol;Acc:2322319]
Coordinates
chr18:17196570-17216417:+
Coord C1 exon
chr18:17196570-17196811
Coord A exon
chr18:17196812-17216324
Coord C2 exon
chr18:17216325-17216417
Length
19513 bp
Sequences
Splice sites
5' ss Seq
AAAGTAAGC
5' ss Score
7.31
3' ss Seq
TTTTCCTGGTCTTGTCTCAGGGA
3' ss Score
9.11
Exon sequences
Seq C1 exon
GTGGCACTGAGGCATGAAGATGGTGATGAGACCGCCGAACCACCTCCCAGTGGGCACCGGGACCGGAGGAGGGCCAGCATGTGTTCTGGTGGCACTGTGGGCGAGCAGCAAGGCCTTGACCGCAGAAGGAGCCGTAGACACTCAATCCAGAATATCAAGAGCCCACTGTCCGCTCCCACCAGCCCCTGCTCCCAGACGGTTCCTGCCTTCAAACCCAGCCAAGTTCGAGACCTCTGTGAAAA
Seq A exon
GTAAGCCTAACCCTGGTGGTGGGAAGAGGGAGAAAGGTCACACATGTACTGACCACCATTTCCCTCCCCACTAGATGGCAGGGCCTCCTGGTCTTGCTTCCTGCTTCTCCTCTACCACTAAACCTCCCTCAGGGAGGGACTTATGGCCCTTTAAAGTCCATCTAAGCTGCTCCTGATGGCAAGCATAGACTCAATCTTACTAAACTCATCCAGTATTTTCCAAACAGCAAAATCTAAGTCCAAAGCCATGGCCTAGAAATTAATGGTATGCCACACAGAAATGTAAGGTAATATAGACACATACAGATTGGGTTTAGATATGTAGAATAAACATGAAAATTTAAAGACATCTCTTTTATTCAGCACAGACTCATTTCAGCATTTACTCACTCCGTAAACATTTTTATTGAATGTCCATTATAGGTCAGGATCATTCCAAGGTATAAGGATACATATATATGTACATGACTGATGTATGATCTTTATCTTTGTGAGCCTCTATCTAAGCTGGGGGAAAGAGAATGAGGTAGATAGGAAGAGGGGGGGACCCATAGGCCTATGAGAAATTATTATGGGTTCCAAAAAAGAAGCTTGATGGTACTTGTGGGAGCCTAGAATGACTCTGGGGAAAACAGTAGAAGGATGGCCTAGTTTCTCAGGCCCCGAGACATCCAAGCGGATGCTGTCCAGTTGCTGGAATAATAATGGACCTCAGAGATACCCTATTCATTTGCTGCTGAAGTCAGATGCAAGGCATGTTCACATCAGTATCAAGGGCTCCACCATTCTCTCTCATGCTGGAAATATGTGTGAGTCAAATGTAGCCTACCTGACAGCATGGCAAAGGAAAGGATAACTCAGAATACATTGAACAGCCTTTAGAAGTCAACCATCAAGAATGAATGGGTTCCTCTCAACCCCATTGCAGAGAGACTAGCCCACCATCTCTATCACCAAGATGTAGCTTAGACAGCGTGGTACTCACGTTGCATGGGCATGCAGCAGGCCATCCTCTGTTTGCCTGCTAACCAGAAAGCAGGAGGAGGACCTGGTTTGAGAGGCATGGTCCCTTTCTATGTCATGGCCCCAGAGGTCGTGTTTCTGTGTCTGTATGACCAGCTCTACTTAGTGAAAGTCCTAAACTTCTAAATAGATTAAAGTTAGCAAGGTTTACCATGAGCATTACACTTTGTGACCCAGGACCTTGAAGAAACTCATTCAGAGCTGAACCACAGTGCACCTGAAGCACTTACCCAGTACTGACCCTAGCTAGGGCTTTGGGAAATTGACTCAGAGGAAGTTGAGGAAAATGTACACAATAGCCAAAGACAATTTAAAGCCAGTGGAGATGCTGAAGGCAGACGAGAGGCTAGCCTTGTCTACCTTGTTGGTTCTTCACTGATTCATGTTGTGCTTGTTTCTGGCCTCGTTCTTCCTCTTCTTCTTCTCAAGGATTCTTATGTTATGTATTTGAGTGACCACATCTTCTGGTAAGTTGGTGTGGGGGATCAACCTGGGAGCAGCTCATAGTCTCCAGGTTCTAGGCTCAGCAGGAATTGAATCTGGGGTAGGGAAGAGGACACAGACACCGCTCTGAACATTGCTTGTTTTGTTCTATCCAAGAAGTATGCATATTTCATTGTGCCGCTGTTATTACTTTAATATAAATCTAGTAGCATTTGGGAAAAGTACTTTCCAGTTTGTAGAGATTAAAGGAAATGAATATAAACTAAAAGTATGAAGCTGAGAAGAGACGACATTGGACAGTCTTGTAACTTTGAAATAACTTTCCATAGAGCCTGTTGGAGGGAATCTGGGGTGGTAGGCAATGGCACAATTCTCCTCAAAGCAAGGGTACAAAGCAGGAAAGGATGGCAAGAAGGAAAATGGGAAATGGTCTCCCTGTGCTTAGTAGAGACACCTGTTTAGCATCTGTGCACTCTAAATAGCACTTCAGAATCAAGCAGCCCTTTCTGTCAAGCTGCCCTGGTGGCCTGGGAGGCAAGGCTGTGAACTCCCTATACATACTTGATTCTTCTCTGTAGTAAGGTTCCTGTAGATGCCACATGGGAGGGCTGGAGGCTGAGTTTTATCCTTCTGTGACACAAACGATGCCAGCACATTGGAAAAGACAGAACTATGAGAGGTCAGGAGGAGATTCATGGTATTGGAAAGGTGTGTGGAACTCTCTGCTCACATCATTTGAGTTTAGTTCTCATAAAGACCTTCTTGAACTGCATAGGATAAGTACCAGATAGCAGGTATGGTGGGCTTTGCCTTGGGTGCAGGAGTAGGGGATGGGCTGCACTATGAGTTAAACTCAACTCTTGGCTGTCAGTGTTCAGAGCTACTTTCCAGCTTAAACATTTGCACTGAACAGGACTTACCCTTCAGACTCTTTAGAAAAAGAATTGGTCTTCATATGGGCATGTCTTTACTGAGGTAAATAGAAATATTCAAGAAGAATTTAAAAGGAAACAACATCAATTTTCCTTACAGACATAAGCCTGCCAGATTTCTGCTATCATTTTAGTAATAATAGTGTGACCCTGAACTCATATTTCCATGCCATGGCTTCTACACTGGCCATTGGCCCAATAAAGTAGACTTTATTGATGATCTGTTACCTGACACTTTTTCATGCAATATATATACCATAATGAATTTCATCTTCATACTTTATTTTTGCAGATTTGATTATAGACAGAAAGATCAAAGCATTTTAATTTACTACTGAGAAAATTATTTGGGGTCATCTAATTAGCAGAAATGAACAAACTCCAGCAGTGTGTCTCATTCAAATTGCTACCAAGTATAGTCATCCGAAGGACTAAAACATTCTTGATGTTTGTCTAGCTTAAAGCAGGAACCTAGTGGAGGGAACAGGTTCTGCTCTTTGTTTCCTGAGCCCTTAGTCTACCCACACATTTCCTGCTTGCTACCAGAGTCTCCGACCTTAATTTACCTATCCAAACATGGCCCTGTTCAACCAGGTGCTTGCTCTCAACACACAATAGGTCTCCTTCTGTTCAGTCTTCGGTGTTTCTGGCAGGAAACGCTGCACGGGACCCTGAGTGCACCTCTGATTTCCATCCTGTCGAGTTCCACACAACATTCCACTCTCCAGAGGTAATTTTGAAACTCACCAAGTCAACCGGTGCTCGCACGGTCCCATCTAGCGCTTAGTCATGTGTGTATTTTCAGAACACGGAAGAGCGCCTGGCAAGTGTGCACAATGACAGCTGGCTGAGGAATGGGGGATCTAGACTTAAATGCCACGTGTACCAAAGGGCAGTGATGGCTGTCATGTAAATCTTAGATGTCACAAAATACTAATCCCCCATGCTTTTTCCCCCTGACCATTATAAATGCAAAATATATACTAATGTCTAGGTTCTCTAAAATAGATTTTAGGCTAAATTGAGTTCACTGGTTGCATTTTGCCAACTACTGTTCTCAGGGACCAGCTAATTTTTGAGAACCTGGGGGAAAAGGGACTGAAATTGCCAATGAGGAAAATGTGAGGAAGGACAAGGAAACCACCACACCACGTGGGAAGATGGAGGAATCTTATAGTTGGGGTTAGAACAAGAAGGTAAAGGAAGCTGTGAAGTGCTTCATTTGGGGGGCAGTTTGCTTAGCAGGCACAAGCCCTGGGCTATATCCAGGAAGAGATTAAGATCTTTGTTGATCACAAATTCCTATGACACAGGTGAAGTTGGAGAAGGGTAGGCGATAAGCTGGGGTAGGGTGTACAGAGCTTGGTGGGAGGAAAGAGGCTAATGACACATTCAGCGGAGATGGGGGAGTTAGGGAGGTCACAGCAAGATAATCTTAGTTCTAGTGATCCCCAAGGAAGTAGTTCTCAACCAGGAATGACTTTACCACTTCAGGGCTACCTGGTTATGCTTTTGTGATCACTACTAGTGTGCTGGGATCCTGTGGACACATGGTAGGAAGAGTCCAGGAATGCTGTTCTGTCAGGAACCATGCCTTAGTAGGCTCAAGTAACTGGCTGGATTTTTCACTTCCTTCATGGGATGTTTCCAGGTTTGGAAATGGCTGTTGGATGAGGTAGCCAAGGTAGGGTTTTGTTTTGTTTTGTTAAAGAAGATCCTGTGTACCTGCCTCAAATGTTCATATACCAAACCTTGGAGCAATCTTTTAGCTATCACAGAGACAGCATTATTATTATTATTATTTTTAGCAGAAATGGAGTTGTGGAATGTCTTAACCCTAGTCATTCTGGCTTATGTAAGTTATGACAGAGCCCTTTTTCTAGTGTTTATCTCTTTCAGCAAACTTTCACTCTTCAGAGTCTCAGCAAATAACACTGAATTTAGTTAGGAGCAGGCTGGACTGAAATGAATGAATCAATCAGTAACTAAACACAGCCAGTTCTAATCAGCTTTGAATCTATCACATTCCAAAAATTTGACATCTTGGAATGTGACACCTTCATGAAACAAATGGGCAAGGCAGCAATATACTTATGTAACAGAGGTGTGCTAGTCTGAGGCCAGGCCTCATGACTGTAGGGATAGGAGTTCAGGCTCGTATAACCAGGGATGCAGGTGGACCTGGGAGGCCAGATTCACAGTTCTCCTTCAGTTGTTGTCAATGGTTGACACAGAAGTGAAAAGGCTAAGTACGAGAGTTGCCGGGTTTCCGTGTACATTAGAAGAAGAATGATAAAGATGTACTTGCTGTATCTGAAGCAGATGTATCCATTTTAACAAGTTGAAATGTCATTAGGATAAAAACATAGGCTGTTGTGTGAGCTTCTGCTGATTCCTCTGCCCCAGATAGGGCAGTGATGACAGAAACAAGTGATTCGACCCAAGTGCAGCGCCAAGTACCAGTGAATTTAACTGGTGTTACTTACAGGAGTGCGGGCAACTTACAGGCAGCTACACCATTGAAGAAAAAGAACTCCCAGCAACCACTAGCTTCCATTGTCTGGTGGATGGTTATGTGGTCAATAAAACTTTCCAAGTACTGCAGTTGTTAGTATTGTTGTGATGCTATCTGGTCCCTGTTATAAAGCAATGGCCATGTATTAGTTCCTATAAAGCTGTGACAGTAAAGCCAGGCTCTGACCGTTACTCTCATGCCTGTGTTAGGTTCAACTTCAAAGGGATTCTGAAGGCCACCCAAATGGTGGTAGCCTTAGGAAGATCAAGGTTTCCTCCACAGGAAGATGGATAACAGAAGGGGTACCACTCATGAAGCACTCTTGTATACGAACAGGACTGAAGATGAGGGGAGGAGAGACAATGCAGTCATGTGATGAGTCCTGGGAATCAGACTCTGGAGACCAGCATCAGGGTGCAGATCTGAGTTTACTGTGTAGCACAGAAGCTTATATACAGTGCTTGAGCCATCCCCAAGCCTCTAAATCCTCAGCTAATCATATCTTACCATACGGTTACTATGGCCAGTGAAAGCTCAGCCTGATGCTGTTACTCCGAAGGAGGAAGGGGGCATCATCACTGGTTAGGACTTTGCTGAATACAGGAGAAACAGCCTCCACCCTGGCCACAGTTTCTTTTGTTGTGTCACTGGTGTTCCGGGAGCCATTGTTGATCAGATGGCAGATCAGGACTCTTTAAGGAGTCATAGGAGCCTGTGGTACCTTGCTCTCCATCCCACTCTTCCCTTCACAAGGTTGACCTCCACTTCCACTACACTCGCTGTGTGCTGTCTGGGGTGCTAAACGGTTTTTCATGTGTTGCAATTTCCTTGGAGAAAGTTGTAGTGTCCTTTTTACTTAATAGACAAGGAACTTGCCATAGATCGTACTGCTGACCAGTGGCCAGTCATGGCTTAGAGTTTGTACCCAATCCTGGAGTTTGTACCTGGAAAGACTCTCTGATAGGCTAGAATGTGTTTAAGGGGAGGGGTCAATGTTTTAGTTTTGAGGAGCTAATTAGATTCCCTGAGGAAGAAAATGTCATTCAGAGCAAATGATTGAGCTTGGTGATCTTGAAGAGCTGTACTGGTTTTGACTGGATATTGGTTATGACTTGGTTTGCTTTTCCCATGAATGGGCACTGATAATGGCTTCTGAAAAGGACTTCTGAAAATGCTAATTCTAGAGCAAAGCTTCCCAGTGAGCAGAGACTAACCAGCCATTCTGGCAGAGATGGAGAAAGAAAGGTACAGAGAACAGACACACATTGAGAGAAAGCCTCAGCTGGCTCAATGATTGGAGGTGGAGGAGAAGCAGGATCTAATGTTGTAGCATCTAACAGTCAGCGCACCAATTAGTGGCCCAGTGGGTGGTAGGATGAGGTGAGCCTCGAGGTGGGAGTACAGGGGAGAGATCGGAGATACCATGCTCCCCTAAGTGGCGGGGAGCACATTGGTATTACTCTACCAGCCATAGGAAGCAGTGGGCAAACAGAGAGCCTAATTACAGAACCCGGTGGACCAGTGATCTCATCTTCCTATATTTTGACAAGAAGGAGATATAGATGGTTGCTTAAGTTTTAGGACAGGGCATGTCCACAGGGATCTGTTGCCAGGGTTACAGGATTCATCCAGCGGTTACCTGTGGGGTCTGCAGCAGAGTAATGAAGTTGACCCATCTCTTGGGAGGAGTTGGCAATAAGCAATCTGTTTACAAGGGAAAAGTATACAATGAAGCAAGTAGGTATGACATAACATTAACATAAACTCTTTGCCTCGGGTGACCTATTAAGTGCTGGCTCCTACAGCTAGGCTTGGCTCCAAGGTGCTCCTACAGACCACCAGTAACAGATATGGTGGTCAAGAGCAGAGATGTGACCCTCAGGCTTAAGCTCAGCCTTATACCTCCTTAAGAGGGAGAGTTTAGACAGACAGTAAAAATGTGCACTTAGTGGAGTGGGGGTTATATTAGCCACCTCATGCCCTGAAGCTTCCCCAGATAGTGTACTTTTATAGAAGGTAATTGTTAAATAAATATGGACATGAACTAGAGAGACTATTTATTATCCAGCATAAACTTGCTACAGGATTTCACAACAACCAGATTAACAAACATTATGAGCAGCAAGTAGCTACTTGGGAAGGTTTATCTGATTGTAAGTGATCTGTCATGAATGGTATATACTGATGAGGCCCATGACCCCCTGAAGTGAGTATTACTGGGATGGGCAGCCAGGGGTGTGGAGATGTCCAGGGGGGCCCTTCCGGAGCACTGTCAGGCAAAGGGCGGGCTGGAGGAAACAAAGATTGGGTGAAGGAAGAGGGAGGCTTGGAGTAGCAGTAAAGGAAGCCACTTGGGCTGGGAGGAGAAGTCAAAATGTAAAGTTTCTGACTTTTGGAATAACCCCATGACTAGGTTGCCAGTTTCTTGGGAGTTCATCTTTGTGAATTGCCATGGTATATTTGGGGGGATCTTTCTAGATTCTGAGGTAATTGGTAATACCGATCCTTAAAACCATGCAGAACCAGCAGTTGTTTCAGATGGGGAAAGGGTGTGTGTGTGGTGTGCGTGTGCGTGGTGTGCGTGTGTGTGTGTGTGTGTGTTGTGTACATGTATGTATGTGTGTCTGTGCATGCATGCTTGAGTATGTGTGCATGGTATGTGTGCATGTGTTTGGGTGGATCTTTGAGTGAGATCTGGAAGTGGAAACACTCAGAGGATGGAAGTGGGGGAGGATGGGTAAGACACAGAAGAGCATGGTTTACAGGACAGCAATTCAATAGCAGTCAGGGTTTGAGCTGGTTCCCAAGCACCCAGTAGCATAGGATCCTGGGCTGGCTCACTCAATATCCTCTGACGGGGTGTGGAGTGTTTGAAAGGCCTAGGAATAGTAATCCCCAGTCATTTGGACAGGTACTTTTAGGAGCCAAATATAGACAGTTGAGAGTGAAGCCCAGCTGAAAAGCAGGAAAAGTAAACCAAGAGGCAGAGAAACAGAGATAAATGCCTGAGAGGGAAAGTGCTGGTTATGAAATGATGCCAGTGAGATTGCCACCCACTCCCCAGTCAGAGAACTTTTAAAGTGCTTGTCCTCAAGTGTGAGTGCTTCTCAAGCTAGTGGACTCTGACTGTGTGAGGCTTCACAAGGAAACCAGCTGTTCACCCGTGGGCTAGAGGGAAGGCCTGCCTGATGATTTGGTTAGCGAAGGGCTAAGTGTGTTCCCTTTTGGCCTGCACAGACCCTGTGTTTCCTATAACACGTGCCTTCTCATTCAGGATCATGTGTTCACAACCTTTGCTGCTGAGCCTGGATTTCATAGGCAGTCCATGATGGTGTAGACATGAGGACATGTGGGTCCCAAGAGGCCTTTGAGAGAAGAGCATGGCCTTTTCAAGAGTTATTGATTGGATCCACATGGGTGGAGCAGTATCAGTTTTGGTTCCTATGTTCTATGTTTAGGCTAGACATGGTGGTACATACCTGTTTTCCCAGTTGAGAAGCAAAGGCAAGAGGATCTCTGAGAGAGTTTGGGGCCAGCAAGCTGGGACTACATAGCAAGGAACCATAAAGAGAGGGGCTTGGGAGAGAAGGAGGGAGCCTGGTGGTAATTCTAGACTAATGACAGATAACCCTGAAGATACAAATTAGAGAACAAATGTGAGAGCAAAAGTTAAGGTGTCACTGAACACAGACAATGGTGAGGAAGTGTTGGGCAAAGGCCCGAGGAGGACTAAAGAGACCAGACCTGGAGTTAGGCCACACTGTCATTCTGTATGATCGGAAACAAGGTAGCAATGACAGAAACAGCACACTCATGCTAAAATGAATGTTCTGGGTACTAAGTAGCTGTTAAATAGCTGGCAAGGAATGTTCTTACATTTAGGGTAGGTGCCTCTTTCTGAAAAATGATGCTGTTTTTTCCTGTACAGAGGTTTGTCAGATTCACGCAGTCCCCATCTGTCAAGTGTCCTTTTGTCAGCATGCGGATTTGTTTTGTTTTGTTTTAACTTGAAGTGAGGTCATTATTATGAGAGACTTCTCAGAATCGAATTGTCATGGGCCACACCCATGTACGTGGGTCTATTCCATGGTGTCGTGGATCTTCACTGCATCTCTTTGCTTCCTGGTGTTAACGGGATGTTAGTGAGATGGAGACAGAGAGTGATGGGCCGGAGAGGTGAGCTGGTAGGCCCTGCGTGCGTGTGAACACAGGCAGAAGAGCTGCTAGTCTTCAGCGGGGGAAGGAAGGAAGGATGAAGAGGCATTTCTCCAGCTGCTTGTTCTAAACAAGCATTCACAACTTTTAGGCATTTCATAACTATTAGGCCCATGATGTTGGTGTTGCGCTCCCTGGGTTTAATCTGGGAGACACTAATAGGAGACCTGTTCCAGAGGTCGATCAGGAGAGAGGTGAGCTATGTAAACCATCTTACATAAAGGCAGCCAGCACAGTGGCTAATAAATAAAAAGAATCCGTGACTTCAGAGATGTAACAGAGTCGAACCAAGCACAGTGCACAGCTGACCACCGCTGTACCTCGGAGCCCATGCCCTTCAGAGCTTTGTGGTCCTGGGTGCTTTTTGGATGGTGAATGCTTTTGATTATCCTAAGAAGGCTTCCCAAAGACACTGTGACTCAGAGAGGTGCCAGTGGCAATTCTAGGAACTTTGGGAAGCCTTGGTTACAGAATCTACATTGCCCCAGAGACATCATTTCATTCCTGAGATCTTTGCTCCTGCCGTGTGGTTTTGGTTTTATAAACATGAGATTTAAAGGTGACTAGAGATGATCCCTCTGGAGGAAGTGGCCAGTCCAGGCCTGTTGCATGCTGGCATTTCTCCCTCATAGATCCATGGACAGGACAGGGCAAGGACAAGGAGCAGAGAGTATGTCGTGGCTGCATGCCATGGGCAGTCATCCTGAATGGGAAGCAAATGCTTGCAAGATTCAAAAAAGCCACTTTCTGTCCCTACAATTCTTAAATTTATGACCAGCTTTGCAAACTTGCCTTCTCACTTGAGGGTAGAATAGTTTAAATGGTAACATCAGAAGAAGAAAATTATCAATTGTCTCTGACCTAGTATTGTCTGTCTTTGTCACCAAGGCGCCTTTTGTCACAGCAAGGCATCTCCGCTAGGGAAACTCAAACTGCCTGCTTTTCCAGAGCAGCCTTGTGGTGACATACTTTACAGTGACACATGTTCTGAAGTTCGCTTTTAGCGACTGACCTAGTTTGGTGTGCTAGGGACATTAGCACCTTTTATCAACAGTCCCAAGTCATACGCACGTACTACGCCACTCCTATTTTCTCATGCCTACATATTCTAGCATTTGAGACTATGGCCATTACAAAGATCACAGTTTCATAAGACAATGTGCAAATTAATTTGGGGGTGATACACATGGGTGTCTTTGGGAGGGGAGCAGTCAGCTGTGTGGAAGAGCTCAAGGCAGAAATGAAGGGCAGCTTCTCAGGAGAACTTGAAGTGTGCAGGGACAGCCATTGCAGTGCCATTTTGCTTGATGAAGTCATGACATTGCAAACACCAGCACACTTGCCAGGCATTCAGTGCATTTGTAGATTGTGCTCCATGGGTTTTTGTTTGCTTGAAACTAGGTCTCATGTAGCCAAAACTGGCCTTTTGAGTCTTGGTTCTTGACCATTGATTCTTCTGCCTCAGCCTGCCAATACCCTCTTGGAGCAACACGTATTCACCACCACACCCAACTTCAAATATTTTAGTCCAGGAGTTTATTCACTAAATTCATAACAGTATTTATAATAAAAGAGGACTGACCTTTTGTAACTAATAGTATACTATCTCAAAAAGACTGTCAAATCCTGTAAAAATATTAATGAAAAAAATCTTTTAGGATAAGACTGCACCAAGAAAGGATAAGACAGACTGAGTCTTTTTGAGTAAGAATGAGAAGAGCTCTTCAGGTCATGGGAATACCGCGTTCAGTGGGAAATGGAATAGAGGTTTTGGTGTGCCTGAATTTCCTGTCTGTAGCTGGAGAGACAAGACTGTGGAACGTGGAAGGAGATAGAGGTGGTAGGCGATGGAATGAGCTCATATGGAAAGCAGGCTGGGTCATGCAAGGCCCTGGAACTCCCAACATGAAGTCTGGTAATTATCTGGCATGTGAGTGCAGTCATCCTAGCCATGCATATTTGAAACAATGCCCATCTACCTGATTGCAGTTGGGGAAATGTAGAAATGAGAGCCCAGGTGAATACTGAGGCAAAACTACTGGAAAAACAGTGGTAGTCTGGACCCAGGGCAGCATCTCTGTCCCAGCCTTAGGATATGATTAGCAAAAGCAAGACTTGAGCATCCGTGTTTTCAAACATCTCTCAAGGGTGTGGCTCACTAGGCTGAGATGGCCATTGGTCATGAAGAGTCGTGAGGGTTTAGAGGTTTGTGTTGGGAAAAGAGTTGATATCCTTGTCACTCGATCTTCCAAGGAGCCACTTCAGGACTAGAATGAGCCTGGTCCTGTTTGAGTTACAGTGGGAACTATGAGTGTGAAAAGATGCAGTGGGTCAGCAGCATGCAGTGGGGTCTGTGCTCGGTTTTCATTTATGACAAAATATCTGAGCCAAACCATTAGAGAGCAGAGATTTAGGCTCATGGTTTCCGAGGCATCTGTCCTTCATGGCCTGGGGTTTGCCAGAGCAGAACAGCTCACCATATGTACGGAAGGAAGCAAAGAGAAAATTCCTGCCTCAGTGGGCTTTCTCTTTTCCAACTTTTTACCCAATCTGAATGGCTAGCCAAAAGGATGGTGCCACCTACAATCGGGGTAGGTCTTCCCTCATTCAGCTAATTCTCTCTGGAAACACTCTCAACACACACAACCAGAGGTGGGGCTCACCGATTTCTGAAGCATTTCTCATTCTGATCAAGCTGAAAACCAAGATTGATTATCAAGAATTCCTGGAGTAGGTCAATACAAAAACATGTCTCATAGCAAAGAGAGTAAGATAGCTCATTCTCGAGCCAAATATGAATGACTATGGCCCAAGAGCAAAGCTTCTGATTCCTCAAATTCTATGTTCCTCCATGAAAGTGCGATTTTATTAGTTACATAACAGAGAAAGTCATAAATCAAAATGTTTATCAAATACATTGTTGGAGAGGGTAAATTCTGCTGTAGGCTTCAGATGCTGTCTGGTGACAGTATTAGCTTTGAGGTTGGTAACATTTTTAGTGGTCTACTAATAATACAATGTAAGATCCTGATGGCCATGGGGTGTTAGGTAAGCCATAGGGTGAATAGTATATACCTTTTAAAGGTACTGAAAATAGTTCAAGATAATTTGGCTGGTTTGTACCATTTTCTACCTCTACATAATTTTGAAGTTCACTTATTTGGCCTTGGAGCATCTTTAACACAGATGCTCTGTTTCTCTATTTCCCTTTGAATCTCTGTCCCTTCTTCCCACTCCTGTCTCCTTCCTTACCCCCCAACTTGTCTCCCCACCCCTCTCCCCCAAGGAACTTCAATTCACAAGTGATAATCTTTATGGGTAGTCCTGGCTCTTCATTTTTTGTTTTTAATTGTCCTGTTACCTCCTTTAAAGACAATTCCTTCCTCGTGGGTATCTCCACAAGCAGATGGACAATCATGAAGAAAGCAACCTCGAGCTACACAACTCCAGTGGTTACTGCTTGCAATTTTGTGGGCATGACTGGAGACAGAATAGAAAACAGAAATGAGGTTGCTGGGAAGAAGCCTAGCTGAAATGCAGGATTTGGGGTTTATCTCTACACTCCAATCTACATGATTACCATATTAAAAGTTGATTGTGGAATGTTAAGTCCACAGCATTCGAGAAGCACATGAAAGGGCCGTTAGTGTCGAATCAAACGGGGTCACAAATTGAACAGAACTCACTATGCACTGAAGCTACAAAGCACCTTGGGCTCCTTGTAGTAGCCATATTAACATGTACTTCCAAACACACAATGCTTGTCTTGTTGGTATCTAGGAGACTCAATAGGCTTATGCCTCCTGAATACACTTCCCATTGGTGGAAAACCTGAGACAGTAGAACGCACAGGAGAGTGCCATCCTCACCCAAAATGCTTTGAGAGTACACGGTGAGCTGCTGTAGGTGTCTGACTCAAGCCTAAGCACGAAGTTCACTTAGGTTTTGTGTCTACTTCATACGCCTTGATTGAAGACAATTGTAGTGGCTGTGCTCTGATGGCAGTCTATCACATGAGTTCAGGTGTGGAATCTCTAGCTGCCTGCACCTAGAAAGTTTCAGATTATATGGGTTTCAGGTGAAGGATGCCCCACCTGTGTTTGACCTAAAAGCAAGCTTGCGCAGAGAAGGCACGTGTCACATGTGATTGTGTCACATATGTGATTACGTCACTGGTAGAAGGAGGCATCGTGGACATTCATTCCCTCAGTGACACAGGCCAGAAATAGACGTTCCCATTTGGCTGTGACACATCCTTTCAGGTGTGATAGGAGAGAAAGTCCTGGGCAGCTGAAGGTTTAGATAGATTGAAACCATACCTGAGGCATGGCGTGTCCTCTGAGGCCAGCAGCCTGGAAGTGTACAATCTACCTTTCTTTTTTTTTTCCATTGTTTTCTTGGAACTTTCAGGTACATTTGAAATAATGAACTAGAAACTTTGCTGAGAGAAATGTCCTTTATTAATATAAAACCAAGGTATATAAGAAAGGAAGAAAGAAAGAAAGAAAGAGGCTCCTATCCTGTTGCTGTCTCTGGAATAACCTCTTTATACCTGAGCAAATCCGCAGCCCCAGCTACTAACTGCGTTTCTTCTGTTGATGTTTACAGTCTGTAGGTTGAATTTGGCCACATTATAAGACCCCATTTTTTTTTTCAACAGGAATGTGCTGGAAACATTAGTGTTTGACTCTAATCAAAATAGCAAAATCAAGGTCCTTGCCTTGAGGTGCCAGCAAGTCGGCCAGCTTCTTGGGTGTATTTGGGATTCCTGAGCTGCGCTCCTCGCTCTTTCTGAGTGGTGCATGTTGCAGGGACAATAAATACTTTCCCTGTCTAACTTTGGGTGGTCACCATGGAAACGCTGGAGCAGCAGCTGGACTCTGTCAGACATCTTTCAGTCATTTGGCTGGTACTGATCTTTGAGGGAACTTTTATTTCATTTGGCAGATGGCGAAACTCTTATTTTCAAATGACATCACCACCGCTCTTGGTCAGATATTTGTCGTAACTGATTAAGAACACTAATTGGAAATTTGCAGGCTTGGGCCCTGGGTATCCTAGAAACAACCTTAACATTAACAGAAAGCGTGAGTCACAGAGAGGCCAAGTGGAAACTGTAGTTTAAGCATTTGCTAATGCAAAACCACGCGAACCGAGCCTGGGCGAGCATTCTCTTTGTCTTAAGCTCGGCAAAGTGTTCCTCGGAGAAGCTTTTCATCTAGTTATGATGTAAGATGTCCCATCCGTGTGGAACTAGAAGAGCTGCCATTCCTGGCTCATAAGGCTCCGTTATCATTGGTCTGTAGCTCCATTCTGGTTTGTTTTATACACTGCTCATTAACATAAAGGACACTGGTAAGACTGTGACCTACCTGAAACACTGGCAGAGGAATGCCAAGCCTTTTAACATCGTGACATGGCGCTGCCATCTGCCAATGTGGTGGGCTGCATACCTATCTCTGCTGGGGTGCATGTGGCCTGACAGCTGCAGCGGGACTCACCTGACGCTGGCACACACTCCTAACTGACACTGATCTGTGATCTGTGTACCCCTTGTCCCAGAGTCCTTAGGCCTGGGGTGACAGGATACCTATGCGTTTGTTCTTGTCTTGTAGGTTGTTCTGTTTTCCACAACTGTGACAAGCTATAACAAACACGTGTGTAACTGTGCAATGTATTATTCAAATTTACTTTTTTTTCAATAGGTAAAAATACGTCCTGCTGTGTGACACTCTCCCAACTCGTTTCCCTCAGAGTACAGCTTCTGATAGACTCTGTCATCATGGGAAGCTGTACTTAGTATTTCCCCTACATGGACTTTGCCAGAGTACACTCCTTCTTCCTCCTCTTGGTGAACATTTTGGTTATTTCCAGAGCTGGACAATTACAAACAGTGCTGCTGGGAACATTATGGGGTTCTTTCGTCATGTTCAAAAGTCTGAGTCTGGCACTATGGGCATCTTGGTCCTAATCATTCCCTGTTGGGGACCGTCCTGGGCACTGTGGCATCCTTTACTACGGCCCACCAGTTGTTAATATTTCGCCATCCACACAGATGGGACAACTAGAAATGTCTCCAGAGATTGAGACATGTTTTTTGGCTTGGGAAGGGTCATCTTGGTCCACGATGTCTCCCCTAGGGTACAGCAGTGTAGACTCTTTTTTTTTTTTTTTTTTGGAGCTGAGGACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCTTAACCCCCAGCAGTGTAGACTCTTGATATCCTGTGAACAATGTGTTTACAGTAAAGTTCCCATTCCAGTGTTAAAATGCTTAACCCCTCACAGCCTCCTGTCTGAAACTCAAAGGATACAGATGGACTACACTCTTTTCAGCATGCAGCACTCTCAGACAATTTTACATGGTAGAAGTGAAATGTCATCTCACTGTGGTATTAATATAGCCTCCCAACTTAGAGGTTACAGTGGAGTCACATGAGTATTTATCAGCTGTGGCAGCTTTACCCACTTTTTAAATTAAGGCTTTTTTTATTAGTTCTTTGTGAATTTCACATCATTTGTTCTAATCCTACTCATCTACCCCTCCCCTTAGTAACCACCTCTTCCCTCCTCTCCAAAAGAGAAAAAAAGTCCTGTGGAAGCTGTAGTGTGTCACAGTGTGTCCCATGGTATATGCTTTTGTCCACACTTCTTTGCTTGTAAATGTTCATTGCAATGAGTCCTTTGCCTGGTTCAAGGCCTCTCAGGCTTCTGCTAGTCTATCAGTGTGGGAGTCTCACTGGGACTCCTCTGAGATATCCTGTAGTTGCCCTGTGCCATGGAGATCCTGTAGTTTTGGATTTGTAGCACTGGCCCCTTCATGTGCTCTAGCAGTTCATCGATGGGGTAGATATTGGGGTGGGCCAATTCCAAGTCCTGGATCTGGGCCTGAGAGGTATGGAAGCTGGTCCACTGGCTCTCCCACTCTCATACCCTGGAGCCTGGCTCGCATGCAGCCCCCACAGGGCCAGTTTTACTGTGCTGCCCAGGTGAGAGGGGCAGGGCCACTCTCCTGAGTGCTATAGCAGCAAGAGGCAGAATTTTGCTCATTTTTCTTGTTATACCTTGTACCTTTGGGTGTCTAGTTAATACATCTTTGTTTTAGTTGGCATGCAGAGTAACAGGGTTCCCTATGCCACTTATGCACACCTGGTATGCATCTTCACAAATGAGTTAGTCTGTATTTGCTCAGCTTTGCTCTAGAAATTTGCACTGTGCTTTTGAAACAGCTTGATGACATACATTGTGCTCTCTATTTGTGCTTTTGGAATTTAAGAGACATGCCATTACCCTGAGATACAAATTTGGGGAAGTTAAATTGACCTTGGTGGAAATTATGCCCTGTATAACTGAACAGGCTGCAGGTCTCTGGCTTTTCCAATATGAGTGTGGGTGAGGTGGGCACAAATCTGGGATTATTTTTTTGTTTGGCATAAAGGAAAGTACATATAAATCATAGCAAGCTTGTGCCCATGAGCAATTCCTCATGAAGCCAAGCAATATCAAGCTGTGTGTGGTGGTTCCCATTCATGATCCCGTACCTGGATAGCTAAGCCTGGAGGCCTGATGCCTGATGACCTTAAGACTATTCTGGAATATAAACACTCGCCTTGTTTTAAAACAAAAACCCAAGGAAAATCCCAATAGAAGTGTTTAAGAGCTGGAGGCCAAACACCCAGAATTCCTCAGCAAAATAGAATCAACCATGAACAGTCATGCTTCAGGAGAAATTCCAGTCTGGAAAAAAAAAAAAAAAGCAAAGTGGTCGAATCACTTATTCAGCCTTTAACACTATTAGCATGGACATCATTTGGGTTGGTTATTTTGTCATAGGCCTAATGAAACTAAATCAGATCAGCATAGGTAGCCCAATGCCACAGCAGAGATGATTCCTCACCATCCTGTGGCATCATGGGACAATGCTAGCGCTTCTCCTGTAGAAGTGAGCCTCCCGGTTGTCAGTGTGCCACCTGCCTTTTGTCCTGCCCTGTCGCTGTGATTGCAAGGCTGCGTCACTTGTGTGCTGTGTGATGATCGGTTGTGAGACTTAAGGATGCAGCTGGGCATTTATGTCCAGGTCGCCATTTTCAAATGTCGGGGAGAGAAGGAACAAGGGACAGAACCAACATCCATGAGGGCTTACTGCTGGCAGAAAGGAAGAATGCTTTGTGGTATGCTGTGCCTTTTCCCTTTGAGAATTGAGCAGCTTTGAGTCTTCATCAGTAGGAGAGGTTAGAATTTTCCTCAGAGGGCTAGGAGGAAGAGGGGAAGAGAGGCATAGGAGAGGAAAGAGGAGATGATGATGAGGATGTGATGGTGGCCAGTGACAATGATGACAATGACGGCTAATCGTCCTAACCTGTTTACTGTACTCAAGACATTTCAATGGCTTTTTGTCTACAACACAACTCCCTTAGGAGGCAACTACTGTCACTCCATATAGGAACCAGGAAAATGAGACCCACAGTCACATTGCTCAGATGTGGTTGGGGTAGAGAGTAAATATAGGCAGCCTGGCTTCAGAACCTCCCTGCCTCTACCCATGAGGGTACCAGGAATATGGCTACTTTGGAAAAGAGGCTCAGTGTTTTGTTACAAAGAAGCCCATTGGTTGGCAAGATATATGGAATTCAGGCTAGACCCAAAGTCACATCTCCAGCAAACTGTGGATCAAGCTGAGGGATGATGACCTCTTGCTAGTGATTGTGGGTGGTGAGAGCAGGGGAAGGAGAAAAGAACTGCTGGTGAGATGTGGCGTGTGAGTACAGGCCATGCAAGCATGGTGGACAGGGCCGAAGGCTGAGCTTGCCTGGGCCTTTGGGCACTGGAGGAAGGTTGCTGCCCTGATGTCCATTGGTGTCTTTGTGACAGAGGCACACAACACAGGCACTGAGACATGTCCCCATGAATGTGACTGTCAGTTCTCTGGTCATTCTTCCTGCCATATCTGATCAGTCACAGACACATTACTACTGACTGAGATTTTTTGGGATACAAAGTTGTCTTAACAGTTTTAAAATACTAGTCTTTGAAGTTTGTTACTTTTTTTTTTCAGAAAAAGAGGAAAATTCATCATCATTTTAACAAACGAATGAAAATTATTTGACAAAATAAAGGCTGGAATAAGGAATATATGTAATGTAAAAAGCATTTGCTGGTAGACAAAGATGAATGGGAGCTCATTAAGAATTGTATTCATTTAATTAAACCTCACAAAGTAAATCAAACACAATGCAGAGAGGAAAGAGGATTCTCATGATATAAATAGTGGGGGGAACTTATAGTCATAACCATAATTCCAAATTGTGTGGAAAAGTTAAATAAGAAAAAGGAGCTGTTCACACCAATGCAGATCAGGGCAGAAAGTATAGCAAGAACCAGTACCTGGTTCTATAGTCACCTTCCAAGGCTTGCCCTTAGTGATCCACCAAGTAAGCCTGGCTTCCCCAGATAGCACATCAGTTGGGCAACAAGAGTTCAGAACTGGGGCTGGTGGGACCATTTTATATTTAAACCACACTGCCTTCCACACTGCTGGATATGGGTGTTAAAATTGACTTCTGTGTGCATTTTGACGGGGTTGTTTTATTTGAGACAGGCTCTTAATATATGTAGCTCTAGCTGGTGAAGAACTCACTATATGGAACAGGTAGGCCTTGAACTTGCCTTCACCTCTTGAGTGCTGGGATTACAGGCATGTGCCACTATGACCAGCAGTTGGATGTTCCTTGTGGTGTGAGTGGGGGGTAGAAACTACAGACAACTCCAGACTCAGAGTATCCCATAGTGTGTCAATACCTGCAGAAACCCCAGAGGTGACACTGAACACATCCTTGAGGTAGGGGATGAGTCTGGTTCCTGGAAACACCCACTGAAATGGAGGGAGTATCCTTATGGCCCTGTGGGCCACTACAGGGTTTAGTCAATTAGTTAACACCAGTGACCAGCCCCTCAGTGATGAAGACATTCAAACTCTGTGGTTGTAACACAATGTGGCCATCACCAAGAGCATTTATTGGTTGATTCAGTGAGTTGTGAGAAGCCACATAGAAGTTCCTTCCAACGCAGGAAGCTTCCACAGGAGTCATATGTAGAGGGTTCAGGGCAATGGACTTCAATCATGGTGACAAGAAGTCCTCTTCTGGGTTGTGGCATCTTCTCCCCACACTGAATATTCCTTTTCTTAGAGATACCTAGGCTATCCCAGCTAACAAACAGAGACCCCTTCTCCCATCATCACTCTGGGTTTCTTTGTGCTTTGCTGTCCTGTTGTGATGTCCATCTTGTGTCTCCATCTTGTTTCTGTGTGCTCCTTTTTTCCTGGTCTTGTCTCAG
Seq C2 exon
GGATGAGGAGGAGGAAGAAGAAGAACAGCCAATCACGGAGCCCAATTCAGAGGAAGAGAGAGAGGACGATGCCCAGTGTCAGGGCAAGGACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000027230:ENSRNOT00000041961:10
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.951 A=NA C2=1.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]