RnoINT0103690 @ rn6
Intron Retention
Gene
ENSRNOG00000024809 | Ntmt1
Description
N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:RGD Symbol;Acc:1306582]
Coordinates
chr3:9643047-9656039:+
Coord C1 exon
chr3:9643047-9643171
Coord A exon
chr3:9643172-9655835
Coord C2 exon
chr3:9655836-9656039
Length
12664 bp
Sequences
Splice sites
5' ss Seq
TAGGTGAGT
5' ss Score
8.83
3' ss Seq
CCTGCCTCTTCCGTGTTCAGGGG
3' ss Score
11.55
Exon sequences
Seq C1 exon
GACAAAGGCAGAGGCCGCGAGGTGTCTGGTCCGGTAGAGTGGTGGCGGCAGCCGTGGGCTACGGTCTTTGCCAGCCTCCTCCTCAACCCGTCCTTGTCTTTCGAGTCCCTGGAGCCACCACCTAG
Seq A exon
GTGAGTAGCACGAGGCTGGCAGAGGGGACGCGCGGCCAGGGAGGAGGGAGGTGCTCACCCCAACTGCCCGAAGCGGTGAGGCCCTGTCGTCAAGTGACCTGGCTCTGGCCCACGTGCACGTCCCATGGAGGTTCACCGACCAGACCCGGGCAAGGGACTCTGGTGACCACATATTGGCTTAGGGGAAGCCACGTTGTTGGAGGCTGGCAAGACACATCCTCACTTGCGCCCGTAAATCACTTTCCAGTCCTCTGTTTCCCCTCTGAGATAAGCAACCACTGCAAGGCTGGTGTGAGGAATCGGCGCGGTGCTTGGCTCACGTCCTCGCAGTTAAGTGCTTGGTTGCACGGGTTGCTATCATGTTTAACTGGCCCCAGCTCTGGCCAACTTAGCTACTGTCATGAGCCCTTGAGGCCAAGGTCAGCTTCTCTTCGGGGAGGCTGCGGTCTAGAAAAGTCCGAGCTTTGGGGCTCCACCAATAAGGGCCTAGAACAGGTGATGTCCCAGGCCTTGGCTGAGGTGGGGCAGCTGATGGCAGTAATGGTCACTCAGTGATTGGGGATTAATGCTTAGGACCCAGGACTAAGCAGAGAAGCCTGAATTGTCTCCTTTCTTTTGGTCCTTTTTTCCCAAGTGGTGTTTTAAGGCACATCATTTCCTTGAGCTGGTTTTCCTCTGAGTGTACACGCGTGTGCGTGTGTTTGCGTGTGCCTGTGGTGTGTGAGGTACTTGTGGAATGCTCTGCTGAAGACCAGAAGTCACATAATCAAAAGGTCAGAGTCTGCAGCTGTGTGGTGGTTCTGGATGTACAGAGAGAGCTTGTGTTGGCATCTTCTGGACTTAACATCAGTGTGCTGTCATGTGACTTCATAGGTGGGTCCCACCCTTACCAGGGTCTATGTAATTTGGAGGTTTTTTTTTTTGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCGTAATTTGGAGGTTTTAACACTTTTTTCCTTACTCGATCTTTTTAGTTATGTTTGAGCAGGATGGAGGTGGTGCATGCCTTAATTCCAGCACTCAGGAGGCAGAGGCAGGTGGGTCTCTGGGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCTAGGGCAGTAGGCTACACAAAGAAATCCTATCTCAAAAACAAGAAAAGAGAAAAAAAAAGTGTTTTAAGATTTATTTTTAAAGATTTATTTTATGTATATGAGTACACTGTCACTCTCTTTTTTTTTTTTGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCCACTGTCACTCTCTTAAGACACACCAGAAGAGGGCATCGGACTCTTCAAACCATGTGGGAATTGAACTCAGGGCCTCTGGAGGAGCAGTCAGTGCTCTAAACCACTGAGCCATCTCTCCAACCCCCGTGTTTAAGACTTTTTTAAAAGAATATTTTTCTGTTTGAATATATGTCTATGGGGGGCTGTACATACGAGTACGGGGCTCTTGAAGGCCAAAAGAGGGCATCAGATTGCCAGGAACTGCTGTGATTGGTGGTTTTGAGCCACTCCACTAGAATGCTAAGAGCAGCCAGTGCTCTAACAGCTGAGCCATCTCACCGAATGTCTGATCGTGGGGAACTCTAAGCTCAAGAGAGTATATGCCCTACACAGCCTGGGGATTCTCAGGCTCGTTTAATTACTACAGCCCTTCTATGAAGTTCTGAGTGAGTTCCAACCAGCCATGGTCTCATACTGAAGAGGAGGAGGAACAACATTGACGTCTAGGGTTGGCATAATGTGTTTATACACAGTGTAAGGTTCACTCCTGTGTTATTCAAATACAGATTTCTCTGCCCTGGTATCTTGTTTCAATGTGGACATGGCTTTGCTTATACCAAGAACTTCCTGTCTTAAGTCTGTGTAAACAGTTTTTACTATTTATTGCCTGCCTTGTCAATCAATGCTGATCACCCAATGGCTGGGCAGAATAGAGATTAGGGCGGAACATCTGCCAATCAGAGGAAGGAGACTGGGAGAGAGGGAGATTCATGTCTTCAGGAGGATGGAGAATTTGGAGCCTTGAGGAAAGGATCTGGAGAGAGATCACATGGGATGGGACTGGGTGGTAGCCAGATTACCATAGAAGGCTAAGGTAGATCATTTAACTGCTCAGCTATTGAGATGCAGATTTAAATAAATCTTGGCTGTCTTTGTGTAGTTATTGGGGCCCAGCGTAAGGGAAAGAAATACAGCCTGTTGAAATCCGGTTAGTTTATATTAAGAATTATTTATAGTAGAGTATCTTACTTGTTATTTATTTTATTTTGAGTGATGGTGAGAGCTGTGCACTGCAGCCCAAGTTGTTTCTTCCTTTTGTTTCTTTATTTTTTGATACAATGTTTCATGTAGTCTAGGCTAGCTTCAAAGTCACTTTGTAGCCAAGGATGATTTTGAACTCCTGACCTGCCTGCTTCAGTCTTTGAAGTGCTGGGATTACAGGCATGCACAGTATGTCCAATTTTGAGGACCCTGGGGTTTGAACCCCAGCTTTTGTGTATATTAGGTAAACATTGCCAACTGAACTGTTTCAGTTCCTTGAATCAGTGTCTCACTGTGTAATTCAGGCTAGTCTTGATCTCTTGAGCCTTCTGAATGCTAGGAGTCTAGGCATGAAATGCACCATAGCCAGGTAAGGGTCCTGTCTGAGCTTGCACAGCTGGTAAGCAGAGCCACCAATCCAGGCCACCCTACTGTTGAAAGGATGACAGGAGCCCCATTATAGGACCACCTGACTTCAAAAGGGAGGACATCTGTTCCTGGAGCTGACCATAAAACCCTAAGTCATCAGTCTAAGGAGCTAGGCCATAAGTCACCAGCTCCAGGGACAGACTGTAAATTCCAAGAACAAGGCCAATAAATCCCCCGTCCAAGGAACCTGGAGACAACCACAAGAATGGGGAAATCTTGCATCTCAGAATGGGCCGTCGGGGCTGGGTGCATATACGGTTTGGGACCTCTCATCCTGTGGTTAAATGTTCCTGATAACACAGTGCAGTCAGTGCACTGACCACGGGGACACAAGCCAATCAGAAACTGACCCAATTAACATCTCTAGCACCCACCAGGAAAGTTTTAGATTTCTTAACTCTAGCCAGAATTCCCCTAGCTCCCTATAAAATGGCTGTACACCTCTGTCTAGTGTGACCTACCTCTGCACGCAGACTTCTTGCTTGCTTGAAATAACACTCTTGCCAATTGCATATGTGAATGGTGGTCTCCATGTGGCGCTTTCAGATTTTTGGTGCATGGGCTGGGAAGTGCCCCTGAGACCCTCGTCACATTGAGTGTTTGGTCGCTGGCTAGTAAGTGAGTACTCTGTGTCTGTGACCCTATATGTCCAGACAGTCTGATTCTGTGAGTGGCTTAAGCCAATTACTAGAGGTCCCAGGTGGTCCAGGCAGGTACACCAGTGGAATCTACATCTCTCTGACCCACTTGAAGGAGACTTGAAGGTCCCACCTGAAAGGGACTTGATTTCACAGGTAGTTGCGGCGACGTAACGGGGCAGCCGGAACCCACTCAAGTTATAGGTCTTCATTGTGAATTTTGGATCTTTTTCACGTGCTGCACCCGTCCATTTCTGTTTGTATTGTCTGTTTGTGTCTCTATTTGTAACTGTCTTGATCCTAGAATTGGGCCAGACCAGTCCACCCCCTTGAGTCTCGTTAGATCACTTCAAGGAGGTCTGTAAATTAGCAGCCAGAGAAGAACTTCATGTAGAAAAGAAAAAGATGTCTGTCTTTTGCAGAAATGACTGGCCACCTTCAGTGTGGGATAGCCTAAAGAAGGGAACCTGTGACCTCCCCACCATCTGTAGGGTTAAGGATGTTATCTATCAAAAGCCAGGCCACCTGGACCAGGTTGCCCATGTAACCACCTGAGAGACCCTAATGAAAGAGCCTCCTGCCTGGTTAAAACCCTCCCTCCCTTCCTCCCTCTAGGGCCATGACAGTAGAGAGAAGTGGAGAGGTGCCTAGGCCATCCTGCTCCCCTCAGGAGATGTTGAAGAGGAAGTTATCTCTCTGGCCCCCTGTTACCAGCCATCAGGAAATAAATCTGGGGGAGGGGACAGCAGGAGGGGAAACAGGGGTGGGGGTGGTGGAGCCTTGGCAAGGAGAGCCGGTAGGGAAATGGAACGTACACCAAGTACAAATGACAGGTAGGGAGAGATTAAAGGTCTGACCCCAGACGGTAATGAGGGTTGTCTGAGCCACCACAAGGTGGTCCACAAATTTGTCCAAAGTGATCCAGGTTCGACAGGAACAGGATGAGTCACCAGGGGCCTTCCTGAAATGGTTGCTAAAAGCTTACTGAGCTTACACTCCCTTCGACCCAGAACCCAGAGAGGACCAGTCAGTGGTAAATGTGGCCTTCGTCAACCAGACAACACCAGACATGCATTGTAAGTTGCAGAGGCAGGACGGTTTCGGAAGAAAGGTGTATAACATTAGAGGGACTCCCGGAGATAAACCGGCAAAGGGATTGGCCAAGATCCTCTTGGCGGCATCTGCAGGGCCTAATGAGAAAGACAAGTAAAGAAGGTGGCATTTGGAAATACAAATAAAAGAGGAGGTAGGATGAGGTCAGGGTTACAGAGAGATCCTGTGCTCATTGTAAGAAGGTAGGACATTGGGAATGTGAATGGCTTGTGTAGAAACCCCCCCCCCCCCATGGAGGCTAAGGTGCTGGAGTTAGAGGAAATGAGAGATTAGGGAGATGGGGCTCGGCGCCCCTCCCTGAGCCTCAGGTAACCCTAAAGTGGAAGGGAAGCCCGTTAAGTGTCTGTTGGACATAGACACAATACTCCATCCTAAAACAACCTCTGGGACTATTATCTTTAAGACAGGCCTGGGGATGGAGATGGACCGATATTCGTGGACTGCCGCCCAAGATTGGTAGATTTGGGAAATGAACGGGTATCCCACTCTCTCAGTCATCCCCAAGTACCCATACCCCTTTGCTGGTAAGAGTCTTATTGACTAAAATGGGAGCCCATATCCACTTCATTCCAACCTGGGATGGGAAGGAAAAGCCACACACATCCTCGACATGGCCTTGGTAGATGGGCACAGATTATTCAGACACCCCCCCCAGCTCTGGGGAAAGGGGGGAAGCAGGGGAGCCTGCTGCAGTGTTGGATTCAAGAGATCCCAGAAACCTGCGCAGAAACGGGGCATCTGGACTGGCCAAGCACTGACCACTTTGCGGGTAACAGCTGAGGGCTAATGCAATGCCAGCCTGAATCCATTAATGCCCAGGGAAGTCAAGCTGGGCATCACCTCACCACCCACCTCCCACACACATCGGGCACTTAAGGGACTTAGGTATCCTTGTTCCTTGCCACGTAGCCTGGACTACGTACTCAAGATGAGGGGAAGAGGGCTGTCATGTGCAAGAAAAGAGACTATTCTAGGGATCTTGACCCACTAATCTCCCGGGAGTAAGGAATTCCTGGGGTCAGCTGGAATCCTGGGTTTGCTGAGCTGGCTGCCCTCTGTATGAGGTACCCTGTGGAGGAGGCTCCATTGCAATGGACTGAGCACATGGAGGAGACTGCTACGAGATGATCCTACACAGGCCTTGCTAGACGTCACCAAGTCGGAAGAAGAAAAAGGATTGCAAGAAGGGTCTTTAACTAGTCTCTCGGGGCCTGGAAAAGACCAGTGGCATATTTGTCAAAACAACTGGACCCAGTGGTGACTGGATGACCCCTGTGCCTTCAGATAATAGCGGCCATAGCCTAGCTGGTCAAAGACTCAGACAAGCTAACTCTGGTCCAGACCCTTGAGGTGACTAGCCATTGGAAGGGTCCTTGACAGGTGGCTGACCAGTGTGCCAGGTTAGCCCATTACCAGGCTCTGTTCCTGAACTCTCCCCGAGTCAAGTTCATCACCAGCAGCACCCTTAACCTGGCAACCCTGCTCTCTGGCCTGGGCCTAGACGGTCCCTTACGTGACTGCTCGGATTCTGAGCCACGTACAAGGGACAGACTGGACCTTAAGGCCCTACAGCTAGGCCAAGGGAAAAGACTCAGTCTCTAAACAGATAGCCTGTTTGCAACTGCGCATGTCTGTGGGGGCCATCTACAAGGAAAGAAGGCTTCTCACCTCAGAAGGAAAAACTGTCAAAAACAGCCGGAGATCCTGAACCTTCTGCAAGCAGCATGGCTGCCTGAGAAAGTGGCCGTCATGCACTGCCCTGGACACCAAAAGGGAGACAGAGCCATCCCTAGAGGCAACTGGCCAGGAGGCAGCACTCCAGGTCACCACTACCCTAATGGCCTGGCTGCCCTGGATGGTGACATCCACATTGCCTGAGGTCCCAGCTTACATCTACAAGGAGTTAAGAGGCTCTAGACGTGCCCAGCAGCATACAAGGAAGAGGGGTGGTATAGGACCCCCACTATGGAAGGCTTAGCTCCCCCTCAGACTTGGCGAGACATAGAATCAGGCAGACACAGCAGAGCACCTACCTAGGGAAAGAAAGCTTGAGGACCTACTCCAAAGAGTGCACCTTAGAGTCTTTGACTTAAGGCCAGAAACGGGAAGCCATGGCCTGGTACTCGACCTGCCGCACAGTCAACGCCAAGCACGGAGAAGACCTCCAGGTTGGAGACCAGAGAGAGGAACTCGACCTGAGATTGACTTTACAGAAGTCAAGCCTAAGGTAGACGGGTACAGGCACTTGCTAGTGTTGGTAGAGAGATACCTTCGCAGGGTGCACAGAGGCCCACCCCACCAAACGTGAGACCACAGCAGTGGTGACCAAGAAGTAATTAGACATCATCCTGAGGTTTGGCTTCCCTGCCCTGCAGTCAGAAAATGGATCTGGCTGCTTACCTCTCGGGTAACCCAAGAGTTAGTCAAGGCTGTGGGGACAAATTAGAAACTCCATTGTGAGTACCATCCCCAAAGTTCAGGTCAAGTAGACAGAATGAATTGGACCTTAAAGGAGACCTTCACTAAATTAACCCTCAACTGGCGGTGACTGGATGTCTCTCCTTCCCTTCACTCTTTTTAGGATTCGGAATTCCCCTGTTCTCTAGGATTAACCCCTTTTGAAGCTGTGCGCACTAGGACCCCATCTCTGCTGCCCGATATAAAAGCAGAAGTCGTTGCTGAATTTGATGAAAAGTTTCTTTCCTCCCTACAAGCCTCATTCCAGGTACAGTAATCATCAAAAGGCACCAAAAGGAGACATCGGAGCCTGGCTGGAAGGGACCATAGACTTTAATCCTGACCACATCAAGAACAGTCAAGGTCGACGAGGTCCCGGCCTGGATACACCATTCCTGGTTTTACCCATGTAAAACCTGTTGACCCACAGGCAGGCCCAGGCCACTACACACCCGAGGCCTGCACTGGACTATGGCGAGCTGCCACCCACCCACTAGACCCACTTAAGCTAAGAATTCAAAAACCCGCCTCACGAACCCTGCTGCTCGCCCTAAACAATGGCACACCTCGACTGGTCTCCAGAGGGCTCCATCTTCACACTGCTCTGCTTGGAGATCAGACTTCAGCAGACAAACCTTTAACAAGCTGTTACCACCAAATGGATACTTCCAGGCCCCGAGAGAACCCCAGGAGACTTAGAGGTGCAGACTTTGACATTGACTGGTTCCGGCAATACCACCTTTCCCATGTTTAACCTAGGCCTTTGCGCCCTGGCCGGATATGTATGGAAAGATCCGGGTTCAAGCTGTTTGTCATATCAGGAACTGCAGAGCGCTAGGCCAACTTGTGGGCAGGACTGCCAAGAACAGCGACTTGCAGCCATCCAGCTCTGTGGGACTTGCCGAGGTATGGAAAGCTGCTTTTGCTGTATACGGGGCTGTGAGACCAATGCCCCATGGGTCCCTAATAATCGGTCTCTTATCCAGGTAGGCAGGACAGTGAACCCGACACCCAGGGGATTAGTGGGCTCGACATAGGGGAGGAGGAGCCCCATCTCCATCTCGATAATGGAAAAGGGACAAAAAGCAGAGGCTGGGAGGCTGGGAAGGTTTGGGGCTTCATGGTGTATCATGGACACGATAGAGGACTCCTCTTTCAGATTCAAAACAGTCTCTCATCTGGAACCTGCCTGTAGCTGTAGAACCAGCAGTATTGGCAATGCCAACACATTGTAAAAACCACAACGTCAGCCTCGGTTTCAGATCCCTCCTCTCACACACAGGCTCACCCCCATCGTCACGCCCCTCCCCAGGGCCTTCACACATCTGTCCTGCTTAGACTGCTGACTTTACCTTTGTTAATTCCACTATAACCTCACGTGGGAAGACTAGCTTCCCTCACCTTAAACATCTCTGCAGTCACCCCCATACCATGGAGGCCAGCGACATACCTGGTGCGCCCCAGTGGAGCTTGGTTTACATGCACCTCAGGCTTAACCCCTTGACTCCATCCATTCCCGTGCTCTCAAGTTCTCTCACCTTCCTATATGGAAACAGCTCTGGATCCTAAGGGGAGAAGAGATTCAGGGCTCAGCAGTCCTCACAATGCAAGTGGGGTCCGGCATAGCTGCAGGAATCGTGACTGGTGCCACAGCCCTGGTCAAAGCAGATCAATACTTCCGGTCCGAAACAACCTTATAGACTCAGATCTCAACTACAAAAGCCCATCCATCACTTAGAGCAGTCATTGGTCTCGTTAGCTGAATTGGTACCACAAAACAAGGGGGTTCGACTTACGTCACCTGGAACAGGGAGGGCTCTGCCAGGCCTTGGGTCAGCAACGTTGCTTCTACACCAGCCACTCAGTATCAGAAACAGCCTGGCCATGGTCCACCAGAGGTTAGAGGAGAGTGCTAAACTCGGAGCACAGAATCAAAACTGGCATGAATCATTGTTTCCTGGTCCCGCGGCCGATGACACTAACACCGCTCGGCACTGGTGGGACCAGCACTGGTGCTGGGTAGCCGAGGTTGGTCTGCGACTCATGGTAAACCAGGCTGGCCTGGAGCAGAACAGTTCTGCTTCTGTCTCCTGAGTCCCTCCACCATCAGGCCTGACCTATTTTTGTTTTTCAAGAGGGTGTTTCTCTGTGCAGACCAGGCTGGCCTCGAACCCAGGTATTCGTCTGTCTCAGCCTTTGGAGTGCTGGGACTCCATACCCAGCACCCGACATACCTTTTAGCTTATATTAAAACCTGTCATGGTTCTTCTGGTCAGCCTCCCTCTGTGTCTCCATCTCCCCCTCTCTCCCCTTCGCCCCTCTCCCCTCTCTCCCCTTTACTGAGGTGTTCTGCTCTTTACACAGGGCCAACTGCTGTCCACACAGATTCCTAACAGGCTCTGTCCCCCATGCTGCCACAGAGGGGCCACAACGTAATGCAGGTTTTGTCCACTTAGCCTCCAGTTGCTCGCAGGCTCCAACAGGATGTCACAGGTTGTGGTGCCATACAGGCCTGCCTCGGATAGTGTAGACATTTTCTTCTCCTGGGAACAGAGAGTTAGCGAGGCCCGGGTGGAGCGTGACGTAATTAGATGATTTCCAGGGATGCACAGGTGACCGTCTGCCCGTGAGCTAGCCTAGCACACCCAGCCACACTGCCCTGACCCTTCCTGTCCATGATCGTGCAGTTTCATGTAGTGGGGAAAACCGTGTTCTCGCTTTATCTGGTTTTACGAGACAGGGTTTCTCTTTGTAGCCCTGGCTAACCTGAAATTCCTTATGTAGACCAGGCTAGCCCCAAACTCAACAGAGATCAACCTGCCTCTGCCTCCCTATTGCTGGAATTAAAGATGTGTGTCTCCGCCCAGGGAGGATGTCTCTCTTGATGTCCCTAATTCTCAGGAGCCTTCAGGCCACACAGTGGGCCCTAGAGAGCCATGTTGGGACAGGGCCTCAGGAAGCATGTGTCTTCTTCCCGAGTTGGCTGTAAGAGCAAATCAACCCAGGACTTGCATTCCCCAGTCTGGATGTGTCCATCCCCTGCTCCAGCCCCACCCCTCCCCCATAGCTGCTCCCTAGTAGCTAGTGGGGTTCTTGTAAATGAGATTTTTTCAAGAGACTTTGTGGCATTTAAAGGAATTATGCCACAGGCTTTTAGTAAAGCAACAGATATTGTTGGTAATAGTAGTGTCGTCTGGTTTGAGGGGTCTAGGAGCCTCCAAAAGTGAGAAATGGCTGCCCCCACGCATGCTCCCTCGCTCAGTCATTCTACCGCCAACTAGCAAGCCCAGCTGAACTCCAGCACCCCAAAAGACGCTTGGAGGAGCGGGCAAACTGGGGGGCAGCAGAGAGGCGGAGTGTGCTCCCTTCTGTGGGTGTCTCCCATTTCCCCTCTCACCTGGTAAGGGCCAGATCGCGTGCTGCAGGCCCGCGTGCTGCGTGGGCTATGAGGAAATAACTGAAGTCGTCGTTTTCACATTGGAGGGGGCTTTGAACATCAGTCTGAACATTTTCTTAGGACTTAGGGACAGCGAGGAAGGCTGGCTGCTGGGCCCCAGTACGGGCGGGGCCAGCACAGAGCTCGTGTGTGTGTGTGGAAGAGGCCTGAATATCGTCCTAGCTGCTGGTGGCTGTGACAGAGTTGCTGTGGTGCCTAAAGAGGCACCTGACAGCCCTCTTGTCCCAGGTCATTCTCAGTCCCCAATCAAGTACATGGTGATGGCTCATGTACCATGTCTCTGGTTCTCAAGCCACAGTACCGCTCCGCTGGTAGAGGAGATGTTCTTGGGGGACCTACCGGTCTGCACATTGCTCTGTGGGCCAGGGCATCGGTTCTCAGAAGCCTGCCGTTGTCTTCCCTGGGCCAGTGCTGCTGCTGCTGCTGGCAGGGCATTGTGGTAAAGGAGTGTGCCATTTAGAACCAAGGTCCTCAATCTGTTGCTCCAAGGGCCTCTTGGGGTGCAGTACAGCCATGTAAGACGTCTTCCTCTGACACCAAGCCCTTGTCCCAAAGAGTGTGGTTGTGGTGCAGTGGGGGCTGGTGACAGATAAGGCCACTGTGCTCTTGTGTTCCCTCCCCCTTCCAGTCACAGAAGTACTCGGCAGGGACCTCCCAGCAGCCCACGGGGCTCCTTTCTGGTGTGAGCCTCTTTATTGCTCTCTTCTCTGGCTTTGCTCTTTTGCTCCCAGAGTCCCATGCTGACTGTTAGTGTTGAGCTGTGTGACTTAGGTGCTCGGTGACACCGCCTGTCATAGTGGTATCCAAGTCGGTGGGGTGAGACCTGGAGCTCCAAGGCTGGCCATGTTCCTATAGCATCCTAGCTTCCTCACTGGCCCTCCAAGCAGACACACTGTTGCCTCCTAAGGGCCTTCCTTTGTCATTAGCCTGGCAGACATGGTGCCGAGGGCCGTCATGGTGTGAAGTGTGAATGGCAGGGCCCTGCCCCGTGAAGCCAGTGTTTTAGCGGAAAAGCTGCCTGTGTGGGGAGAGCAGTGCATGGACCCTTTGACCTGGGCAGGGCTTTTAGTTTCTATGTCCCCCGGGTCCCTCTTCTGTACAGTGGGTAATGGTGGCAGGGGAAGGTCGGATGCTGGACAGTGGCTGAGCAGTGACCGACACTTGTCCACTGTCTTTCAGCACAGCTACCGCTGTATCTGCTTCCCCCTGACACCCTCGGGTTAGTCCTGGGTGTTTCTCGTGAATTGGACACTTAATTAGTTTTCAGTGACTATCAACTTCGTGAGCTCCTCAGCCAGCAGGAGCCAGCAGGGGCCAGCAGGAGCCAGCAGAGGCCAGCAGGGGCCAGCAGGCCGCAGTTCAGGGCTGCTCCTCTGTAAAAGTCTTCTGCTGCTTCTCAGTCATTCTCACTGTGGCCCTGCTGCTGCCCCTATCACTTTCTCTGTCCCTGTACCCCTCCCCCAGAGGCCCCCCTGCCCCCATTCAGAAAGCAGTCCTCTAGAGCCCACCAGGCCCAGTGGGGTGCTTATCCAGTGGTACAAGACCTGGGTTCCACTGGAAACAAAAGGAAGAGATGGCTCCATTGACTGCACAGCCTTTATGAAAGCCATGTAAGGACGGAGGGGCCCTTGTTTTCTGCTGTGTTTAGCAGCTTTCTGCTTCCCTGTCTCCTGCTGGACTGTGAACACCGATCCTCGCACTAGCTGGGACACAGGGGAGCCAGCACCTCCCACAGTTGTGATCCTGCGTCTTCCACAACACATGGTGTGGAAGCTGGCGTGGGTGCTGCCAGCCTAGTTCTTCCTGTTGGGGTCCTGTTTGTGCCTAGCTCCTGCCTATTGCCACAGTCTGGTGCCTGGCAGAGAACGTGCTCTGGAATGAAGGGCTGGCCCTCCCTGACCTGTTCGCTTGCCACTGAGGGAGTAGAAAGGGAAGGAAGTTGCTCAGGCCTTCTGGGGTGTCCATAGCAGAAGTCAGGGAACCCTGCTCTGTGGCCTTTGCCTGTCCTGAGGTCAAGAGAGTCACATGGATGTCCGGGATGTTGGGCTGCCTAGGCGACTGGATGTTGCTTTCTCAGGGCTTCATTACCTCTCAGAGAGGTAGTGCCTCTCGCATTATGGCCTGTATACTAGAGGCTTCCTGCCATTCAGTGCCCTGTTGACCCTGCCTCTTCCGTGTTCAG
Seq C2 exon
GGGAGCAGAGCAGTGGCTGGTGACTGTGCAGCTGGTGACGTCATGACAAGCGAGGTGATCGAAGATGAGAAACAGTTTTATTCGAAGGCCAAGACCTACTGGAAGCAGATTCCGCCCACGGTGGACGGCATGCTCGGGGGGTATGGCCACATCTCCAACATCGACCTCAACAGCTCCCGGAAGTTTCTGCAGAGGTTTTTAAGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000024809:ENSRNOT00000035805:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.019
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF058917=Methyltransf_PK=PU(21.3=85.2)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]