RnoINT0167764 @ rn6
Intron Retention
Gene
ENSRNOG00000027955 | Zfp133
Description
zinc finger protein 133 [Source:RGD Symbol;Acc:1566283]
Coordinates
chr3:138597638-138609225:+
Coord C1 exon
chr3:138597638-138597824
Coord A exon
chr3:138597825-138609098
Coord C2 exon
chr3:138609099-138609225
Length
11274 bp
Sequences
Splice sites
5' ss Seq
AAGGTATGG
5' ss Score
9.26
3' ss Seq
AGGGCTGTTTTGTGTTCCAGGTA
3' ss Score
9.59
Exon sequences
Seq C1 exon
TGTAGTTCCTCAGGCAGAGGCTTGACTGCGTTTTATGAACGCGATTTTAGGAAGGAGTGGGCCTCCAGGTGCCACAGCAACCACTCTCCAGCTAAGCAAAGCATGCGGCCGAGAAACGGACTGATCATAGTCGATGGGAGCTGCCGTCCCTCCGCGCACAGCTGGTGGGCGCGGGGCATGCTGGAAG
Seq A exon
GTATGGTTCCTGCGCCTGGAAGCCTCTGAGTAATGTAGTCCTGGCGCCGGCTGGGCATGGGGTGGGGTGTGCTCCCCAGCTGGAGGCTGGAGCAGCCCCTTGTTCTTTGGTGAGTGCATCTCCCACCGGACCTGTTCTGGACCAAGATAAGGTCTTGCAGGGCTTGTCTAGAGTCTAGCCTGGCACTGGATTGTGCTACTGGAAACTGGGACGCAGCGCGGGTGTGTTTTCTTGTGAGTGTGGCATACATCTCTGAGGGAGTGTTAGCTTCAGCTGTGAACCCCAGGGATAGGTGATGCAAGGCTCAACCCTTCTGTGTTAGGGTTCTTGTGGGTGGGGACAGGTTCAGCATTGGTTGAAATCCCAGCATTGGTAGAGCTCGCCGCTCATGCTCTGAGTCCCTATGTAAGGGAGGCTTGACTGAGGAAACTTAGCGGTTGATACTTACTAGGTGGTGGGGTGGGACTGCCTCTGGATTTTTTGGTGTTTTGGGGAGCTGGTGGTCTTTGGATTCTACCACCCCTCAACTTTGCTGAGGTGTGGTGACCACCGCTTGTCCTATCCAACGAAGTCCAGGTTTCACTGGGTGTGAGGTGGCCATGTTGGCCTGATCTCAGGTACTCAGTTTAGTGCGCCCTCCCCTCAGGTTAGGATCTTGGAGAGGAGGAAGTCAAGCTGTGGCCCATTCCTCAAGTTTTTTGTTTTTTTGAGACAGGGTTTATTTGTGTAGCCCTGGATGTCCTGAAATTTTCTCTGTAACAATCCTGACCTTGAACTCAGAGATCTACCTGCCTCAGTCTCCCGAGTCCTGGGAGGTTTTCAAAGCATCCAAAGATTTAATAACTCCAAGAATCCTAGAATTTTAAATTGAATTTTAATGTTTTATTATGGAGAACTTCCAAACAGCCAGAAAGAAAAATCCAAAGCTATATCACCTAGATTCAATGTTTGCCACCATGTGACTAATCATGATTCATCTTAAAGTGGACACACTGGGAGTCCTTACAACCCTGAAGACTCGGATCTTCACAGCCATGCTTTCCCGGGCTGTCACGTCAGAGTCTTGTCACCTTAGCAGGGGCCTCCCTGCTCTCACTGTGTCTCCAGTCTCGTGTGTAAAATGGTAGCAGCATCTGTTTTGAGTTGTTGTAAGGGTAGAATGAAAAGTGCTTGCCAGGAACAGGCTCTAGAATGTTCTAGGTGTTCAGTAAGTATTGACTCTCATTACTACTGGAAGAGTGGATCATCTCCCATCAGCAGTGTGTCAGGGAAGGCTGACTTCTTAGACTACATCCCAGCTTGCTTTCTAGGAAGCTACCCACAATTCATCTAGTCTTGTCTGCAGTGCCTTTAAGGGCAAAGAGGTATACTGCCCTGTTGGAGCTTGAGGATTTCCAAGGACTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCTCCTGCTTCTGGTGACCCCTGGCTGCCTAGAGTACCTCCTCCTGGGGAAAGAGGACACTTTTGGGCTCCTCATTTCCAGGTGAGTGTCATATCCTTTTGCATCCTGAACCAGGAGTATGTTTCCTTTGCACTCTTTGGACATCTTGTATGTCATGGTGTCCCACTGGGGCTCAGAGCCCCAGCTGGTTCCTCTAGGGAACCTTGTTCCAGGGGGACAGTTTTTGCAGGGAATATTCAGCCAGGCTTTCTCACTTACCACACCTGCACTGTCTCCCCTGCATCCTATCTCAGCCCTTGTTTAGCCTGCTCAGTCCCAGGGTTTGTCTGGAGTCAGCCTGTGTCCATCCACCATTTACGGTTTGTCCTGCTGGAATTGTTTTAAGGAATTTTCAGTTACTTCCTTGGCACGTAACTTCACACACACACACACACACACACACACACACACACACACACACACACGCATCGGAGACCTGAGGAGGGGATGAAAGAATGGGGGACAGGAGTTGCAAAGAAGGAGAGCAAGTCGATTGTCCGATCAAGCTCTCAAATTTTATTTCAGGGCAGTGGCTTATAAAGACAAGCAAGCGGGAAGGCCACACAGGGCCCAAGGTCCATTCATCACTGTCACTACCCTCTCATTGTTCTTTTGGTTCCTGTGACTATAAACTGCATGTTGCAGGTGTACTGATAAGAACAGATAACTGGCTAGGTTTCCCAGACACAGAGGCTGCATAAGTGGACCTGAAACATTCCTGAGAACATTCCTGAAACGGAGGGTGTAAAAGTGGGCTTGGCTCCCGGCACATGCACGCATGCACACACACTTTTACTTTTAAAGACACAACTTTAATGTATGTGTCCAATTTCATGGTACATCTAGCAACAAGAGAAACTTAACAGGATTTACCATCCAGCCCATGTGGGTCTTCCTCAGTTGTTTAAAGAAGTGTGCTTTTTGTTGTTTTCTTTTCCTCTCCAGTCATCACATCTGTGATTAAAGGCCGGCAGGTGAAAGGGAAGTATTTGGAATTCAGCATGCTGGCTTTCACTTTCTGTGTCCCTCCTGTTTCTCTGAGCCTCGCCCTTCCACGTTTAACAGCTGTAACTTCTGTCTGCCGACACAAGGCGGCTCTCTGTGTTTGTCTTGCTCTCACATTCTTCCCAGACTTGCTTTGCACATGGTTGGCTGGGGCACTCTCCAGTCCTACATCGTGTTCACTTAACTCCACGAGCTATGGTCGTGTCTTCTGTCCTTCTCTTGCCCCTCGCACACTGTAGTCGGGGCTCTTTGATGTCTACCAGGGTATTTCCTTGTCCAGGATCTGATCTGACTCCATCATGCTCTCCTCCATATCTGCCGCCCTCTCCTGTGGTACGGGGAATTCTTCAAAAGGGAGCAGGGACCTGGCAACTTCTTTTTAGGTTCAGCCTCAAAACCTTGAGGTCATCCTTGGTTCTTCCTTGTTTTCTACAAGCCGTCTACAGTAACTGAGTCTGAAATTGAATGACGGATAACCTCTGCCTCTTCCGCTGTGGTCTGTGTCACCATTCTCATGTGAATGATCATTGCTGTCTGTTGTCCTCTTCTCTTATTCTCTTAATCCCCACTGCCCCAGACAGAAACCACAGGGATCTTTTCAGCTATAAATCAAACTATACCGTCCATTTACAAAACCCCTCCCCAGTGGCTTCCCATCCTAATCAAAGTTAAAATCAGTATGGTATAAGGCTGGGTCACACTGCGCCATGTTTACATTTGGACATCATCTCTGCTACTCCATCCTGACACAACATTGTCCTTTACCTTGCTAGCCCGACTGTCGTGTCAGGGCTTTGTCCTGGCTCTCCTCCTGGCTGAGGTACTTAACTTCCTCACATCGGTCAGATTCAGTGAGTTTATAGAGGTCTCCCTAATCACTTATTTAATGTTCCAGAGCCGTGGCCATGTTTGTTACTACTTTGTTTCAGTGCTTATTTCTGTCTGTTAAAACTGTGTTTTCTTCATTCATCCGTTCAGCTGTAGCCATGGGAGTATCACCAAGATGATACTCTCAGTATCTTTGATGCTTCAGTGGGTTCACTTCCTGTAAGCAGCCCTTCCAGAAGGATTTGTCTCTGTTTTCTTTCAGAAGTCCAGTCACATCTTTTTGGTGTCTGGATTTTGCCCATTTCTCTGTTTCTTAGTTTTTGATTTTTTTTTTTTTTTAATTCTAGATGCTCTTTTGTGTATTTCAAGAGACTTACTTCAACCTGGAGTTACGGTTTTGTTATGGTTCTTTCTTCCTAACATAGCCGAGTTGTCTGGATTCTTGCTTTCTGCTTTGTATTTTAATTAAAAATGTTTAGTTTGTTTCTATTGTATGTGCATCATGTTTTCCCTGTGTGTATGTCTGTGCACCACGTATATACAGTGGCTGTGGAGACAAAGTGGGCACCAGATCCCCTGGATTTGGAGCTGCTTGTCTTGTGGCTGCTGGGAATCGAACTCTGATCCTCCAGAAGTGTGAATAGTGCTCTTAACTGCTGAGCCATCTCTCTAACTTGTCTGCTTTGCATTTTAATAGGTGACTATTTACATGCCTACCTTTTTGTAAACAGAACTGTCAAGATTTTAGTGTTTTTGGTCCATCTCCCATCCTAGTTTGAAAAAAAAAAAAACGCTTTTGCAAGCTTAAGTGTGGTTTTCATATTTGATTGCAGAGGAAGGAGAGGTGGTGTGTGCTTTGGTATGTAGTTTAATCCTTTTTGCTTTTCAAGAACCTGGATTTCCCTTTCTTTCCTGTCTCTCCCTCCACCTTGCTCTTTGCAAGAAGGGGCTTTTATTCTCGAGCCTTTTAAAGAAAGCATGCTCACCTGACACTCTCTCTGTTTCCTTCCCTAGATGTACTTTCAAGATACCATCCTTCTTGAAGGGGGGTGGGAAAGGTGGCTCCAGGGTTCCAGAGAGCCAAGGGAATGCCTCCTGTCTTCATGCCAGCTGCCATAGGATAGACAGTCACTAGTCTCACTTGTCTCTTGTCCTGAGTGTCTTAGTGGTGCTTACTGGAGTCCGGCTCCTGTTCTGTCTTAACGATGGCACCTGCAGGCACCACTCGGTGTCCCTTTGTGCTTAGCTCCTGTATCAGTTGTTTACCTCATAATAAACAGTGCACCACACAGTTCTTCAGTAGAAAACAGTGTCCAAGTTCCTTTGTTCCTCTTCAACCGTCTGCTGGCCAAGAGTGACTTCACAGTAAAGAGCAGGGAGACCCAGACATCTTTCTCCCCTCACAGACAACAGTTGAATTGCTGGAATATGTCACACTTACCTACCTGTGACCGGAGCACTTTGCACATGCCTGTCGGGAGCCACAGTGGACAATAAAATGTTTCATCCAGGTATCAAGGGTGTGTGTTCTGGTTGTTGTTACTGATCTCATCTCTACCAGCTGAAGTGGCTAGATAACAACAGAAATGAGAAGGTAGAACGATTCGGAAGCTAGTTTAGGCAAACAGGAGTGAGTCACAGACACTGATGATAGGATAATTGAAATGAAGTCTGTGGACCATGAAAAATACTACAGAAAATAAACAGAGACTTAGGGATCTGTGGGGACCCCAAGCAACCCAGTGTCCACTTGTGGGGTTATCAGCTGTTTTGTTTGATTTTTTTGTTTGTTTGTTTGGTTGGTTTTTTTGAGACATGGCCTTATTACGTAGCCCTGGCTGGCATGGAATTCTCCATGTAGATCGCATTGGCCTCAAACTCACAGAGATCCACCTGTCTCTGCCTCCCAGGTGCTGGGTCTAATGGTGTGCGCCACCACACTTGGCCACTTCTGTGATTATCAAAAGGGGAAAAAGGAAGGCATTTGAGAAAATAATGGCCCTGCCTTTGAGCAATGACACGAAATATGAACGGTCAAAAAGCTCTGCAAAGTACAAGGTATGATACACCAGGAGATCTACAGCAGGACACACGGTAACAAGAGGATTAAACCAAAGACTTCAGAGAAGAAGCAAGCAGAAAGCAATTCTGAGTACATGGGGTCCTAAGGAGACTGTCAGCAGATGCCATATGACACATCTGAGACAACAGGAAGTGATGGGTTGGGATTTTGTTTTTGTTACAGTGCGTCAGGATGGACAACAGAAAACCAGCTGATCTCACAGACATACCCAACAAAACATACCCAAGATGTGCCCTCTCAGGTGCATGTGGAGCCTTTCGGCATAAACTATATATCATACCACAAGACTACTATCGGTAGTCTTAGAAAGGTGTATATCAAAAGACTTTCTACCCACAGTGAAATAAAGTTATAAACCAGCAGCAGAAGGAAAATTGAAAATTCCTCACCTACCAGGAAATTAAATAATATATGTGTGGAAACCAATGTGTGGAAGGGGAAATCACAAGGACATGAGGAACTTCTAGAGACAGTTGAAGACAAAAACAAATTCTACGGTGGAGTCAAAGTTGAGTGACAGTTTTAAGCTGAGTGTTCCATTTAAGAAGATGAGAGTCTTGAACGCAGGTCACTTGACAATGTTTTTCTGGCCTGCAAGTAGCCCTGGGTTGATCCCTGGCACCACATAAACCCAGGTATGGTGGTCCAAGCCTGTGACTCCAGCCTGTGTGGCCTGGCAGGAATATCAGAAGTTTGCATACGTAGCAAATTTGAAGCTGGTCTTGGCTCCTTGAGATCCTGTCTTTAAAAGAGACAGAAAGAAAGAAGAGTCTAGGGAAACAACCCAGATTTAAAATTTAGAGAGCTAGGGAAAAAGAAGGTGAATCCAAAGGTAGTAAAGAACAAAAACACTGACTGTTAGAATAAAAGCAAGTGACGTGGAGAGGCTGGGTCTGGTGTGTACACCAGTGTTTCCAGTGCTTGGAGGGAGGAGGTTTGCCTTAAATTTGAGATCAACCTGGGCTATCTAGTGAGTCTAAAAACAAACCAAAAGAAAAGAAAATCAAACTTAGAAGTTCTCAAAAAAGCAACAAAATTTATAAACCTGCAAAACGCATTGATTTTTAAATGTAATTTTTTCAAATCAGATATAAAAAATGAAGTAGAGATTGAAAGAATTAAGAGTACCATAAACTTTACACCAACAAATTGGATGAACTAAATGAAACTACCCTGAAGAGGGTGTGTTGAGGAAATGGAAACTCTAGCTATGCCTTGGTTCAGTTATTGAACCTGTCTCACTAAGAAGGCCTTTGACGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGAATGCTCTTCTAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCGTGAGATCTGATGCCCTCTTCTGGTGTGCATTAAGACAGTGACAGTGTACTTATAATAAATAAATAAATAAATAAATAAATAAATAAATAAATATTTAGGAAGGCCTTTGGCCTGTGGCTTCTCTGGTGAATTCTACCAAACAACCCAGAGAAATGCTAATACCAATCCTTGGGCCAGAAATATGTAAGTTATTCTTGGAAGTCGGAAATCAGTATTACTCTTGGTGCCTAAACTAGACAAAGACACTAAAAGAAAACTTCAAATTTGTTACAGCTGAGGAAGGAAAACAAACAACAGCAAAAAACTTCAAGAAAATGCTAACTCAATTGAAAAGCACATTAAAACAGTATATACGGGGTGTGGAGGTGTGATTCTTGAGATTTAAGGATGATGGTTTGACATGAAAAAAATCAGCATAGCACATCACATTGATGGAAGGGAAGGGCACATAGTCTTCCTGCTGGATGCAGAAACATACGAACAAAATGAAATCCTTTTATGTGAAAGTTAGAGTAGAGGGTCTATGAGAAGGTCTCAGTTCAGTGTGTGTGTGTGCGCGCGCGCGTGCGCACGCCAGAGGCATAACACAGGGACAGGATAAAGATGTCCACTTTTGCACTTGAAATGAACAAACAGCCTTTAGAAGTTCTAGCCAGTGAAAAAGAAACACAAAGCATTGATTTAAGAAGAAAACAGTAAAATGAGCTCTTCACAGATGACGGGATCTTATATGTTGAAGGTTTTATAGATTACACGCATATATACACACACACACAAACACACCTATGAGAACTAATTTACAGTAGTCGTGCACACATAAACCGGTTGGAGATCTGTAGACTAGCAATGAGCAATCCTAAAAGAATTAAGAAAACAGTGGTATTTTAGAAAACATCAAATGGGATAAGCTACATAGAAGTAAAGATATGTAAACGGAAGGAAAGAAATCAGGGCTTGGGGTATGCCTCAGTGGTAGAGATCTAGTCTAGCATCTAGATTTCATCTCTTTATGAAATCTGAGTTCCGTCTTCAGACCACAAGAGTAAATAAGGAAAAAAGAAAGAGGAAGAAAAATTAAAGAAGCCACAAATAAATTGAGAGATGCCATGTGTTACTGTATTGAAAAACTTAAATGCAAACCAATGAAAACCATTCTTCAAGCTCAATTGTAGCATCTATCAAAAAAGCACAAGAACTTTGTTTTACAGAAATAGAGCTCACCCCAAAGATCGTTGGGATCTGAAGGGACTCTTGAGTTCCTGAAGCAGTCATGAGAGAGAGCTAAGTTGGAAGACTTATGTGTGAAGATTTCATGAATTTCCACAAAGCAACTCTAATCCGAGCTTCAGTCCTGAAATAGATCAATGGACAACACGGACATCAGAGTCAACCCTTGCATACGTGGCCAAATGTTTTTCAGGAAGAGTGTAAAACCATCCCATGTGGAAGGGACCACGCATGTCTGTCAGAAAAGAGTGAATGTGGACACTTAGCTCACACCATGCGCACAAAGAGAAAGGGAGTCTGGGACACAAGCCTGAGAGCCCCACTGCGCGCCTCTTTAAAGGAAGCGGGTGCATGTGATCTGCATTTGGTGATTACTTGTGAATGGTATCAAAAGCACAGACAACGGGAAACAAAACCGAAATACTGGGCTTCCTTAAAACTTTGAACTTTCGGGGTTGGGGATTTGGCTCAGTGGCAGAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGACCCAAAAAAAAAAAAAAAAAAAACAAAAAACAAAACTTTGAACTTTCTCATCGAAAGGAAAGAAGACTACGCGTGAGTATTCTATATGTACAGGCTGCGTGTTGAGTATACATAACTGAGAAGCACGGTCAGGAATATATAAAGAACATACAACGAAAGGCTCAGACCGGGTCTTCGAATGGTTTGTGTAGGCGTTTTTATGAAGAAAATGTAAATCTGAGCAACATGTTAGTGGTCCGTCACTGTAATGTCATACCTGAAGAAATCGATTTACAAATAAAAAGCTTTATTCCTGCTCACGGTTTGGGGGGTTCTAGTACGTGGTGGCCCTGTTGCTTTGGGCCTGTGGTAAGGCAGCAAAGGGTCATGAGAGTGCATGAAAGAGCAAAACCGCTTACATGGAAAACCAGGGGCCGGACAGTAATGAAATGGGCGTGGTCTCCCAGTTCTAGTTGAGGGCACGCCCCACGACCCTACTTCTTAAAGGTTCTGCTTCCTCCCGGTACTGCCGTCCTGCGGCCAAGCCTTTAACCCATGGTCCTTTAAAGCATCGGGCCCACAAACTTGTCAACCAATAAGCATATAAAAGTATCAATGTAATCAGTAGAGAGATACAAGTGAAGAGCCCAGGGAACTACCACTTTTCCCCATGTGTATGGTTAAAAGGGGGTGGAGGATGGGGAGGTGACTCAGTTAGCAAAGTGACTGCTGTACAAGCAGGAACTTAGGAGTTTAGATGCCTAGAACCAAAACAGGCACAACATGCATCTGTAAGCACAGCTCGGGGAGAGAGGGGCCTAGGAGGAGCCCTGGTCATCCAGCCTAGCAGATGCAGGAGCTCTAGGTACATCAAAAACAACAACAAAAACCGAGAGAGTGCTGTAATCCCAGTAGAAGTAGAGGCAGGTGAATCTCTGTGAGTTCGAGGCCAACCTGGCCTTCATAGTGAGCTCCAGGCTAATAGAGAGGATATGGAGAAGCTAGAGCCCTTGCACATTGCTAATGTCCCACTGTGGACACAGAATTACCATTTGATCCAGTTAACCTTACTGGGCACGCACTCAAGAGAACTGGAGGTAAGAACCTGGATACTCAGCGTGAATGGCACTTATTCAGAGTAGCTAGAAGCCATATCCTTCATTCCAGAACAGTGTAATTTCAAAGCACACTAAGTGAAATCTTACTTAGCTTTACAGAGGAGTGAGAAGAGTGCATACGTCTATGCGGATGAGTCTTGGGGATGTGCTACCCCCAGTGCGCCACACATTGTGTGATTCCGCTTATGTTAGCCACAGACGAAATATGTGTCCCAGATATTCAGGGACAGAAATGGTCTTTACCAGGGTTGGGAACTGGGAGATTACTGTTCAGTCCAGAGTTTTCCACATGCAAGTGTCGAGAATGCCATGGAGAGGAAAGTGGTGATTAGCGATTGGCAGCACTGGGAACGCCCTTGATGCTACCCCACTGCCTACCTCATGGTCCAGACAGTGACTTCTGTGCTGTGTATCTTAGGCTGCAGAAGTTAAACACCTGCAAGCTGTTTCGCTCCACTTCCGTTGTTTCATTCTGATAGTCAGCCCCACTCGTCCATGGTTTGGGTCTTCCTTCTCCCTCTGTCTCCGCCCAGGATGCCCTTGGCCATGCTCCCCACAGGTTCATCTGGAACTCTAGTGCACTGTTCTTTCCTCGGTTCCTCTCTGTTCTAGAAGACCAAGCACCAGCACTCAGTCTTCACAAAGCTCTTCAAGCTGTGCTCTAAGGAGCGCTGTGTTCTAAGGAGCGGAGTCAAGAATGGATCTGGACAGGAGAGTGGGGCGGAGATGAGGAGCCAAGAGGTTCCACTGTGGGAGTTTAAATTCAAACAGGTTTCTGGAGAGAGAAAGCTGAAGCACTGGTTTATGACAGAGATGGGCCTGAAACTTAGGTATTGTGGCTCTGACGCCTCCGTGCCCCTCAGGTCAGAGATGAAAGGCTGTAGCAGTTGAGCAGGGCTGAGTTGTAGCATATTTAGGCTTTGGTGTTATGGAACTGCACAAATTTCAAATGTGCTAAGACTAATATGACGTGTAAGATGATTTGGTCTTTTAAATTTTTAAAACTTAGGAGTTGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCTGGGTTTGGTCCCCAGCTCCGAAAAAAAAGAAAAAGAAAAACAAAAAGAAAAACAAAAACAAAAACTTAGGAGTCTGGGAACTGGAGACTGTTGCTCCGTGGTTACGAGGGTGTTGCTCTCGGAGCGGACCCAGGTTCCGTTCCAGCACCCGTATCAGGTGACTTACAACTGCCTGTAACTCCAACTCCAGGAGTTCAGATGTCTTCTTCTGTGTGCATTCTTTGTGTACCCCTACATGTATGTACACAGACATAACATCAGTACATACACAAATAAAAACTTAAAAACCTAACAACTCAAATTCTCTTAGGCCTTACTGTTGTTTATTTTTTATATATCGGCTATATAGATTTCTGCTAGATTTAAAATTCTCAGAACTTACAGTATACTTTTTGTATATACAAATTAGCCTACCAGGACTTTTAGTGTGTAATTCAAAAATGGTACTGACTTGATAGATACAGGGGTTTAGAGGTCTCAGAACATAGAGCATCAGAGTGGCAGCCAAAAACAGGCTGGTACTGGGGTAGCCTCCTCTTGCCTCTCACCCTGAGCCACATCAAGGCTGGCTCAGGGGTAAGCAGGGCTGTTTTGTGTTCCAG
Seq C2 exon
GTACACATGGCATTCAGAGATGTGGCTGTGGATTTCTCCCAGGAGGAGTGGAGCCTGCTGAGCCCTGCTCAGCGGTCCCTGTACAGAGAGGTGATGTTGGAGAACTACAGCAACCTGGTCTCTCTGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000027955:ENSRNOT00000031623:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.278 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0135222=KRAB=WD(100=95.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg19)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]