Special

ENSBTAG00000000033 @ bosTau6

Biotype
protein_coding
Gene Symbol
PHOSPHO1
Description
phosphatase, orphan 1 [Source:HGNC Symbol;Acc:HGNC:16815]
Coordinates
chr19:37978510-37985160:+
Assembly
bosTau6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
67.21
85.53
0
Alternative 3'ss
121
chr19:37983485-37983605
+
32.79
85.53
0
Alternative 5'ss
0
NA
+
34.5
59.74
0
Alternative 5'ss
133
chr19:37978669-37978801
+
55.03
41.45
0
Exon Skipping
111
chr19:37981737-37981847
+
89
42.86
0
Exon Skipping
122
chr19:37982654-37982775
+
15.6
94.62
0
Intron Retention
1080
chr19:37978802-37979881
+
17.64
98.64
0
Intron Retention
1756
chr19:37979981-37981736
+
13.58
100
0
Intron Retention
1758
chr19:37981848-37983605
+
29.16
94.12
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000173868 PHOSPHO1 1-to-1
Human hg19 ENSG00000173868 PHOSPHO1 1-to-1
Mouse mm10 ENSMUSG00000050860 Phospho1 1-to-1
Mouse mm9 ENSMUSG00000050860 Phospho1 1-to-1
Rat rn6 ENSRNOG00000005569 Phospho1 1-to-1
Chicken galGal4 ENSGALG00000001281 PHOSPHO1 1-to-1
Chicken galGal3 ENSGALG00000001281 PHOSPHO1 1-to-1
Zebrafish danRer10 ENSDARG00000008403 phospho1 1-to-1
Fruitfly dm6 FBgn0031045 CG14212 2-to-2
Fruitfly dm6 FBgn0031048 CG12237 2-to-2
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"