Special

ENSBTAG00000021066 @ bosTau6

Biotype
protein_coding
Gene Symbol
CAPN11
Description
calpain 11 [Source:HGNC Symbol;Acc:HGNC:1478]
Coordinates
chr23:17807298-17820479:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
18.02
27.51
0
Alternative 3'ss
229
chr23:17820004-17820232
+
81.98
27.51
0
Exon Skipping
75
chr23:17814300-17814374
+
96.52
27.46
0
Exon Skipping
58
chr23:17817927-17817984
+
89.13
26.67
0
Exon Skipping
65
chr23:17818105-17818169
+
80.9
37.5
0
Exon Skipping
69
chr23:17818455-17818523
+
82.59
26.09
0
Intron Retention
292
chr23:17816817-17817108
+
57.21
74.39
0
Intron Retention
86
chr23:17817841-17817926
+
9.61
20.11
0
Intron Retention
285
chr23:17818170-17818454
+
21.84
39.96
0
Intron Retention
570
chr23:17818524-17819093
+
23.99
61.69
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000137225 CAPN11 1-to-1
Human hg19 ENSG00000137225 CAPN11 1-to-1
Mouse mm10 ENSMUSG00000058626 Capn11 1-to-1
Mouse mm9 ENSMUSG00000058626 Capn11 1-to-1
Rat rn6 ENSRNOG00000026025 Capn11 1-to-1