Special

ENSDARG00000055338 @ danRer10

Biotype
protein_coding
Gene Symbol
CAPN1 (2 of 2)
Description
calpain 1, (mu/I) large subunit [Source:HGNC Symbol;Acc:HGNC:1476]
Coordinates
chr21:27445454-27471091:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
70.02
39.53
0
Alternative 3'ss
20
chr21:27468553-27468572
-
29.98
39.53
0
Exon Skipping
70
chr21:27468483-27468552
-
98.02
10.26
0
Intron Retention
1778
chr21:27447605-27449382
-
13.6
28.3
0
Intron Retention
127
chr21:27447420-27447546
-
24.06
65.44
0
Intron Retention
111
chr21:27447244-27447354
-
23.81
50.4
0
Intron Retention
997
chr21:27446178-27447174
-
39.84
73.38
0
Intron Retention
94
chr21:27446005-27446098
-
35.8
98.73
0
Intron Retention
87
chr21:27445801-27445887
-
17.07
78.95
0
Intron Retention
92
chr21:27445650-27445741
-
43.18
98.04
0
Intron Retention
2581
chr21:27458003-27460583
-
9.24
60.63
0
Intron Retention
82
chr21:27457837-27457918
-
11.85
31.66
0
Intron Retention
84
chr21:27457667-27457750
-
9.47
35.21
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000014216 CAPN1 2-to-1
Human hg19 ENSG00000014216 CAPN1 2-to-1
Mouse mm10 ENSMUSG00000024942 Capn1 2-to-1
Mouse mm9 ENSMUSG00000024942 Capn1 2-to-1
Rat rn6 ENSRNOG00000020935 Capn1 2-to-1
Cow bosTau6 ENSBTAG00000010230 CAPN1 2-to-1