Special

ENSRNOG00000020935 @ rn6

Biotype
protein_coding
Gene Symbol
Capn1
Description
calpain 1 [Source:RGD Symbol;Acc:2267]
Coordinates
chr1:221346066-221370322:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
315
chr1:221370837-221371151
-
91.18
45.76
0
Exon Skipping
188
chr1:221350919-221351106
-
4.19
33.98
0
Exon Skipping
86
chr1:221364333-221364418
-
96.39
60
0
Exon Skipping
151
chr1:221367865-221368015
-
0.44
10.2
0
Intron Retention
1508
chr1:221349793-221351300
-
8.58
58.25
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000014216 CAPN1 1-to-1
Human hg19 ENSG00000014216 CAPN1 1-to-1
Mouse mm10 ENSMUSG00000024942 Capn1 1-to-1
Mouse mm9 ENSMUSG00000024942 Capn1 1-to-1
Cow bosTau6 ENSBTAG00000010230 CAPN1 1-to-1
Zebrafish danRer10 ENSDARG00000045199 CAPN1 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000055338 CAPN1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0012051 CalpA 8-to-2
Fruitfly dm6 FBgn0025866 CalpB 8-to-2