FBgn0025866 @ dm6
Biotype
protein_coding
Gene Symbol
CalpB
Description
The gene Calpain-B is referred to in FlyBase by the symbol DmelCalpB (CG8107, FBgn0025866). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3L:9888762..9893319. Its molecular function is described by: calcium-dependent cysteine-type endopeptidase activity; calcium ion binding. It is involved in the biological process described with: proteolysis; border follicle cell migration; neuron remodeling; protein autoprocessing. 19 alleles are reported. The phenotypes of these alleles manifest in: axon; border follicle cell. The phenotypic classes of alleles include: locomotor behavior defective; pain response defective; fertile; neuroanatomy defective; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, during late pupal stages, in adult female stages.
Coordinates
chr3L:9888762-9893319:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000092529 | CAPN3 | 2-to-2 |
| Human | hg38 | ENSG00000135773 | CAPN9 | 2-to-2 |
| Human | hg19 | ENSG00000092529 | CAPN3 | 2-to-2 |
| Human | hg19 | ENSG00000135773 | CAPN9 | 2-to-2 |
| Mouse | mm10 | ENSMUSG00000031981 | Capn9 | 2-to-2 |
| Mouse | mm10 | ENSMUSG00000079110 | Capn3 | 2-to-2 |
| Mouse | mm9 | ENSMUSG00000031981 | Capn9 | 2-to-2 |
| Mouse | mm9 | ENSMUSG00000079110 | Capn3 | 2-to-2 |
| Rat | rn6 | ENSRNOG00000003468 | Capn8 | 2-to-8 |
| Rat | rn6 | ENSRNOG00000020389 | Capn12 | 2-to-8 |
| Rat | rn6 | ENSRNOG00000026025 | Capn11 | 2-to-8 |
| Rat | rn6 | ENSRNOG00000032375 | Capn13 | 2-to-8 |
| Rat | rn6 | ENSRNOG00000034015 | Capn2 | 2-to-8 |
| Cow | bosTau6 | ENSBTAG00000008868 | CAPN3 | 2-to-1 |
| Chicken | galGal4 | ENSGALG00000009050 | CAPN3 | 2-to-1 |
| Chicken | galGal3 | ENSGALG00000009050 | CAPN3 | 2-to-1 |
| Zebrafish | danRer10 | ENSDARG00000012341 | capn9 | 2-to-3 |
| Zebrafish | danRer10 | ENSDARG00000041864 | capn3a | 2-to-3 |
| Zebrafish | danRer10 | ENSDARG00000043035 | capn3b | 2-to-3 |