Special

ENSMUSG00000079110 @ mm10

Biotype
protein_coding
Gene Symbol
Capn3
Description
calpain 3 [Source:MGI Symbol;Acc:MGI:107437]
Coordinates
chr2:120456019-120504913:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
75.01
94.89
0
Alternative 5'ss
182
chr2:120501325-120501506
+
19.4
93.73
0
Alternative 5'ss
308
chr2:120501325-120501632
+
5.59
41.89
0
Exon Skipping
144
chr2:120486333-120486476
+
38.22
100
0
Exon Skipping
18
chr2:120498968-120498985
+
40.12
100
0
Exon Skipping
114
chr2:120501211-120501324
+
39.86
100
0
Intron Retention
778
chr2:120501325-120502102
+
10.42
38.7
0
Intron Retention
84
chr2:120502445-120502528
+
11.69
31.56
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000092529 CAPN3 1-to-1
Human hg19 ENSG00000092529 CAPN3 1-to-1
Rat rn6 ENSRNOG00000008609 Capn3 1-to-1
Cow bosTau6 ENSBTAG00000008868 CAPN3 1-to-1
Chicken galGal4 ENSGALG00000009050 CAPN3 1-to-1
Chicken galGal3 ENSGALG00000009050 CAPN3 1-to-1
Zebrafish danRer10 ENSDARG00000041864 capn3a 1-to-2
Zebrafish danRer10 ENSDARG00000043035 capn3b 1-to-2
Fruitfly dm6 FBgn0012051 CalpA 2-to-2
Fruitfly dm6 FBgn0025866 CalpB 2-to-2