Special

ENSMUSG00000079110 @ mm9

Biotype
protein_coding
Gene Symbol
Capn3
Description
calpain 3 [Source:MGI Symbol;Acc:MGI:107437]
Coordinates
chr2:120281755-120330649:+
Assembly
mm9
Other assemblies
mm10

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
77.21
98.53
0
Alternative 5'ss
182
chr2:120327061-120327242
+
20.91
97.32
0
Exon Skipping
49
chr2:120322714-120322762
+
39.62
100
0
Exon Skipping
144
chr2:120312069-120312212
+
40.79
100
0
Exon Skipping
18
chr2:120324704-120324721
+
39.14
100
0
Exon Skipping
114
chr2:120326947-120327060
+
52.35
100
0
Intron Retention
778
chr2:120327061-120327838
+
9.83
38.7
0
Intron Retention
84
chr2:120328181-120328264
+
11.21
31.56
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000092529 CAPN3 1-to-1
Human hg19 ENSG00000092529 CAPN3 1-to-1
Rat rn6 ENSRNOG00000008609 Capn3 1-to-1
Cow bosTau6 ENSBTAG00000008868 CAPN3 1-to-1
Chicken galGal4 ENSGALG00000009050 CAPN3 1-to-1
Chicken galGal3 ENSGALG00000009050 CAPN3 1-to-1
Zebrafish danRer10 ENSDARG00000043035 capn3b 1-to-1
Fruitfly dm6 FBgn0012051 CalpA 2-to-2
Fruitfly dm6 FBgn0025866 CalpB 2-to-2
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