Special

ENSRNOG00000008609 @ rn6

Biotype
protein_coding
Gene Symbol
Capn3
Description
calpain 3 [Source:RGD Symbol;Acc:2269]
Coordinates
chr3:112228720-112278408:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
26.76
87.66
0
Alternative 3'ss
19
chr3:112274173-112274191
+
73.24
87.66
0
Exon Skipping
70
chr3:112250990-112251059
+
31.48
100
0
Exon Skipping
114
chr3:112274173-112274286
+
50.69
100
0
Exon Skipping
117
chr3:112276890-112277006
+
94
56.54
0
Exon Skipping
84
chr3:112259826-112259909
+
94.93
63.46
0
Exon Skipping
144
chr3:112258038-112258181
+
73.1
95.65
0
Exon Skipping
18
chr3:112271927-112271944
+
47.99
100
0
Exon Skipping
161
chr3:112264707-112264867
+
41.39
99.94
0
Exon Skipping
78
chr3:112263883-112263960
+
42.94
99.64
0
Exon Skipping
86
chr3:112261996-112262081
+
42.66
100
0
Exon Skipping
169
chr3:112256724-112256892
+
70.95
100
0
Exon Skipping
134
chr3:112256043-112256176
+
68.88
96.44
0
Exon Skipping
119
chr3:112252325-112252443
+
61.97
100
0
Intron Retention
2667
chr3:112264868-112267534
+
11.14
37.04
0
Intron Retention
2228
chr3:112271945-112274172
+
5.78
23.43
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000092529 CAPN3 1-to-1
Human hg19 ENSG00000092529 CAPN3 1-to-1
Mouse mm10 ENSMUSG00000079110 Capn3 1-to-1
Mouse mm9 ENSMUSG00000079110 Capn3 1-to-1
Cow bosTau6 ENSBTAG00000008868 CAPN3 1-to-1
Chicken galGal4 ENSGALG00000009050 CAPN3 1-to-1
Chicken galGal3 ENSGALG00000009050 CAPN3 1-to-1
Zebrafish danRer10 ENSDARG00000041864 capn3a 1-to-2
Zebrafish danRer10 ENSDARG00000043035 capn3b 1-to-2
Fruitfly dm6 FBgn0012051 CalpA 8-to-2
Fruitfly dm6 FBgn0025866 CalpB 8-to-2