Special

ENSG00000092529 @ hg19

Biotype
protein_coding
Gene Symbol
CAPN3
Description
calpain 3, (p94) [Source:HGNC Symbol;Acc:1480]
Coordinates
chr15:42640301-42704515:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
144
chr15:42682151-42682294
+
72.34
88.89
0
Exon Skipping
18
chr15:42698124-42698141
+
38.66
99.95
0
Exon Skipping
114
chr15:42700409-42700522
+
78.8
64.59
0
Exon Skipping
114
chr15:42646538-42646651
+
93.02
23.49
0
Intron Retention
1988
chr15:42691851-42693838
+
12.7
40
0
Intron Retention
658
chr15:42694334-42694991
+
47.59
92.19
0
Intron Retention
4433
chr15:42695976-42700408
+
67.85
87.6
0
Intron Retention
978
chr15:42700523-42701500
+
23.76
59
0
Intron Retention
1614
chr15:42676751-42678364
+
8.23
31.43
0
Intron Retention
286
chr15:42703199-42703484
+
4.83
94.22
0
Intron Retention
2542
chr15:42682295-42684836
+
15.89
76.73
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000079110 Capn3 1-to-1
Mouse mm9 ENSMUSG00000079110 Capn3 1-to-1
Rat rn6 ENSRNOG00000008609 Capn3 1-to-1
Cow bosTau6 ENSBTAG00000008868 CAPN3 1-to-1
Chicken galGal4 ENSGALG00000009050 CAPN3 1-to-1
Chicken galGal3 ENSGALG00000009050 CAPN3 1-to-1
Zebrafish danRer10 ENSDARG00000043035 capn3b 1-to-1
Fruitfly dm6 FBgn0012051 CalpA 2-to-2
Fruitfly dm6 FBgn0025866 CalpB 2-to-2