Special

ENSBTAG00000008868 @ bosTau6

Biotype
protein_coding
Gene Symbol
CAPN3
Description
Bos taurus calpain 3, (p94) (CAPN3), mRNA. [Source:RefSeq mRNA;Acc:NM_174260]
Coordinates
chr10:37828797-37885860:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
147
chr10:37864495-37864641
+
72.74
94.44
0
Exon Skipping
18
chr10:37878425-37878442
+
65.12
96.15
0
Exon Skipping
114
chr10:37881705-37881818
+
72.22
93.62
0
Intron Retention
657
chr10:37874813-37875469
+
12.64
23.39
0
Intron Retention
1952
chr10:37876473-37878424
+
6.15
24.43
0
Intron Retention
3262
chr10:37878443-37881704
+
9.23
23.56
0
Intron Retention
963
chr10:37881819-37882781
+
8.52
26.74
0
Intron Retention
485
chr10:37883449-37883933
+
15.52
42.62
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000092529 CAPN3 1-to-1
Human hg19 ENSG00000092529 CAPN3 1-to-1
Mouse mm10 ENSMUSG00000079110 Capn3 1-to-1
Mouse mm9 ENSMUSG00000079110 Capn3 1-to-1
Rat rn6 ENSRNOG00000008609 Capn3 1-to-1
Chicken galGal4 ENSGALG00000009050 CAPN3 1-to-1
Chicken galGal3 ENSGALG00000009050 CAPN3 1-to-1
Zebrafish danRer10 ENSDARG00000043035 capn3b 1-to-1
Fruitfly dm6 FBgn0012051 CalpA 1-to-2
Fruitfly dm6 FBgn0025866 CalpB 1-to-2