FBgn0012051 @ dm6
Biotype
protein_coding
Gene Symbol
CalpA
Description
The gene Calpain-A is referred to in FlyBase by the symbol DmelCalpA (CG7563, FBgn0012051). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (3 unique). Gene sequence location is 2R:19425113..19430564. Its molecular function is described by: calcium ion binding; calcium-dependent cysteine-type endopeptidase activity. It is involved in the biological process described with 9 unique terms, many of which group under: multicellular organismal process; metabolic process; multicellular organism development; protein metabolic process; organonitrogen compound metabolic process. 22 alleles are reported. The phenotype of these alleles manifest in: A1-7 lateral transverse muscle. The phenotypic classes of alleles include: immune response defective; viable; majority die during embryonic stage; long lived; partially lethal - majority die; locomotor behavior defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 18-24 hour embryonic stages.
Coordinates
chr2R:19425113-19430564:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000092529 | CAPN3 | 2-to-2 |
Human | hg38 | ENSG00000135773 | CAPN9 | 2-to-2 |
Human | hg19 | ENSG00000092529 | CAPN3 | 2-to-2 |
Human | hg19 | ENSG00000135773 | CAPN9 | 2-to-2 |
Mouse | mm10 | ENSMUSG00000031981 | Capn9 | 2-to-2 |
Mouse | mm10 | ENSMUSG00000079110 | Capn3 | 2-to-2 |
Mouse | mm9 | ENSMUSG00000031981 | Capn9 | 2-to-2 |
Mouse | mm9 | ENSMUSG00000079110 | Capn3 | 2-to-2 |
Rat | rn6 | ENSRNOG00000003468 | Capn8 | 2-to-8 |
Rat | rn6 | ENSRNOG00000020389 | Capn12 | 2-to-8 |
Rat | rn6 | ENSRNOG00000026025 | Capn11 | 2-to-8 |
Rat | rn6 | ENSRNOG00000032375 | Capn13 | 2-to-8 |
Rat | rn6 | ENSRNOG00000034015 | Capn2 | 2-to-8 |
Cow | bosTau6 | ENSBTAG00000008868 | CAPN3 | 2-to-1 |
Chicken | galGal4 | ENSGALG00000009050 | CAPN3 | 2-to-1 |
Chicken | galGal3 | ENSGALG00000009050 | CAPN3 | 2-to-1 |
Zebrafish | danRer10 | ENSDARG00000012341 | capn9 | 2-to-3 |
Zebrafish | danRer10 | ENSDARG00000041864 | capn3a | 2-to-3 |
Zebrafish | danRer10 | ENSDARG00000043035 | capn3b | 2-to-3 |