Special

ENSMUSG00000031981 @ mm9

Biotype
protein_coding
Gene Symbol
Capn9
Description
calpain 9 [Source:MGI Symbol;Acc:MGI:1920897]
Coordinates
chr8:127100011-127142631:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
16.26
30.51
0
Alternative 5'ss
137
chr8:127100121-127100257
+
83.74
30.51
0
Exon Skipping
169
chr8:127121399-127121567
+
94.56
19.44
0
Exon Skipping
84
chr8:127122610-127122693
+
94.73
24.49
0
Intron Retention
2329
chr8:127133074-127135402
+
8.15
21.44
0
Intron Retention
1856
chr8:127135461-127137316
+
11.15
17.9
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000135773 CAPN9 1-to-1
Human hg19 ENSG00000135773 CAPN9 1-to-1
Rat rn6 ENSRNOG00000018480 Capn9 1-to-1
Chicken galGal4 ENSGALG00000011136 CAPN9 1-to-1
Chicken galGal3 ENSGALG00000011136 CAPN9 1-to-1
Zebrafish danRer10 ENSDARG00000012341 capn9 1-to-1
Fruitfly dm6 FBgn0012051 CalpA 2-to-2
Fruitfly dm6 FBgn0025866 CalpB 2-to-2