Special

ENSDARG00000079388 @ danRer10

Biotype
protein_coding
Gene Symbol
agrn
Description
agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
Coordinates
chr23:23559210-23988136:+
Assembly
danRer10

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]


EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
35.98
42.1
0
Alternative 3'ss
3
chr23:23867981-23867983
+
64.02
42.1
0
Alternative 5'ss
0
NA
+
71.09
45.55
0
Alternative 5'ss
33
chr23:23732531-23732563
+
28.91
45.55
0
Exon Skipping
12
chr23:23957700-23957711
+
35.5
98.25
8
Exon Skipping
21
chr23:23676363-23676383
+
11.17
81.47
0
Exon Skipping
24
chr23:23967336-23967359
+
5.32
81.03
10
Exon Skipping
33
chr23:23969999-23970031
+
3.76
19.93
6
Exon Skipping
222
chr23:23849810-23850031
+
94.29
37.9
0
Exon Skipping
106
chr23:23907190-23907295
+
94.41
24.45
0
Exon Skipping
327
chr23:23917946-23918272
+
90.27
44.9
0
Exon Skipping
126
chr23:23921616-23921741
+
95.37
18.03
0
Exon Skipping
201
chr23:23867981-23868181
+
93.26
59.23
0
Exon Skipping
201
chr23:23870361-23870561
+
93.84
62.28
0
Exon Skipping
143
chr23:23889906-23890048
+
94.98
40.72
0
Exon Skipping
106
chr23:23890164-23890269
+
95.36
28.65
0
Exon Skipping
117
chr23:23898838-23898954
+
95.26
22.05
0
Exon Skipping
165
chr23:23903525-23903689
+
95.25
17.96
0
Exon Skipping
144
chr23:23904295-23904438
+
95.01
16.76
0
Exon Skipping
125
chr23:23906983-23907107
+
94.46
20.33
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000188157 AGRN 1-to-1
Human hg19 ENSG00000188157 AGRN 1-to-1
Mouse mm10 ENSMUSG00000041936 Agrn 1-to-1
Mouse mm9 ENSMUSG00000041936 Agrn 1-to-1
Rat rn6 ENSRNOG00000020205 Agrn 1-to-1
Cow bosTau6 ENSBTAG00000013191 AGRN 1-to-1
Chicken galGal4 ENSGALG00000002041 AGRN 1-to-1
Chicken galGal3 ENSGALG00000002041 AGRN 1-to-1
Fruitfly dm6 FBgn0031414 eys 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"