Special

ENSG00000007001 @ hg38

Biotype
protein_coding
Gene Symbol
UPP2
Description
uridine phosphorylase 2 [Source:HGNC Symbol;Acc:HGNC:23061]
Coordinates
chr2:157876702-158136154:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
83
chr2:157877334-157877416
+
11.3
15.76
0
Exon Skipping
223
chr2:158123371-158123593
+
7.3
30.23
0
Exon Skipping
563
chr2:158126213-158126775
+
19.29
100
0
Exon Skipping
71
chr2:158127965-158128035
+
28.87
66.77
0
Exon Skipping
159
chr2:158115101-158115259
+
96.49
14
0
Exon Skipping
86
chr2:158015801-158015886
+
93.39
11.52
0
Intron Retention
2564
chr2:158115260-158117823
+
40.01
86.07
0
Intron Retention
3470
chr2:158117939-158121408
+
20.13
94.87
0
Intron Retention
2130
chr2:158121619-158123748
+
20.49
87.76
0
Intron Retention
10852
chr2:158123896-158134747
+
32.91
47.23
0
Intron Retention
3973
chr2:158102126-158106098
+
7.45
20.75
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026839 Upp2 1-to-1
Mouse mm9 ENSMUSG00000026839 Upp2 1-to-1
Rat rn6 ENSRNOG00000005341 Upp2 1-to-1
Cow bosTau6 ENSBTAG00000012801 UPP2 1-to-1
Chicken galGal4 ENSGALG00000012554 UPP2 1-to-1
Chicken galGal3 ENSGALG00000012554 UPP2 1-to-1
Zebrafish danRer10 ENSDARG00000036833 upp2 1-to-1
Fruitfly dm6 FBgn0031489 CG17224 2-to-3
Fruitfly dm6 FBgn0034800 CG3788 2-to-3
Fruitfly dm6 FBgn0039464 CG6330 2-to-3
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"