Special

ENSG00000007372 @ hg38

Biotype
protein_coding
Gene Symbol
PAX6
Description
paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
Coordinates
chr11:31784779-31818062:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
6.8
24.34
0
Alternative 5'ss
201
chr11:31801561-31801761
-
93.19
24.34
0
Exon Skipping
42
chr11:31801871-31801912
-
24.92
47.69
8
Exon Skipping
151
chr11:31790710-31790860
-
98.94
7.03
1
Exon Skipping
131
chr11:31802704-31802834
-
95.7
13.75
0
Intron Retention
3567
chr11:31802835-31806401
-
13.09
36.96
0
Intron Retention
704
chr11:31800857-31801560
-
10.75
27.47
0
Intron Retention
197
chr11:31811016-31811212
-
79.03
54.04
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000027168 Pax6 1-to-1
Mouse mm9 ENSMUSG00000027168 Pax6 1-to-1
Rat rn6 ENSRNOG00000004410 Pax6 1-to-1
Cow bosTau6 ENSBTAG00000004561 PAX6 1-to-1
Chicken galGal4 ENSGALG00000012123 Pax-6 1-to-1
Chicken galGal3 ENSGALG00000012123 PAX6_CHICK 2-to-1
Zebrafish danRer10 ENSDARG00000045936 pax6b 1-to-2
Zebrafish danRer10 ENSDARG00000103379 pax6a 1-to-2
Fruitfly dm6 FBgn0005558 ey 1-to-2
Fruitfly dm6 FBgn0019650 toy 1-to-2