Special

ENSG00000105707 @ hg38

Biotype
protein_coding
Gene Symbol
HPN
Description
hepsin [Source:HGNC Symbol;Acc:HGNC:5155]
Coordinates
chr19:35040506-35066571:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
17
chr19:35042453-35042469
+
69.55
33.29
0
Alternative 3'ss
162
chr19:35042308-35042469
+
18.47
20.86
0
Exon Skipping
191
chr19:35060627-35060817
+
97.96
27.18
0
Exon Skipping
70
chr19:35042453-35042522
+
96.21
16.67
0
Exon Skipping
102
chr19:35049290-35049391
+
99.49
6.78
1
Exon Skipping
42
chr19:35049475-35049516
+
99.32
5.37
1
Intron Retention
580
chr19:35041873-35042452
+
40.76
88.91
0
Intron Retention
216
chr19:35066033-35066248
+
12.51
48.06
0
Intron Retention
83
chr19:35049392-35049474
+
19.69
74.57
0
Intron Retention
132
chr19:35059997-35060128
+
13.57
63.05
0
Intron Retention
114
chr19:35060513-35060626
+
10.07
31.51
0
Intron Retention
6767
chr19:35042523-35049289
+
9.11
32.31
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000001249 Hpn 1-to-1
Mouse mm9 ENSMUSG00000001249 Hpn 1-to-1
Rat rn6 ENSRNOG00000021097 Hpn 1-to-1
Cow bosTau6 ENSBTAG00000003829 HPN 1-to-1
Zebrafish danRer10 ENSDARG00000027609 HPN 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"