Special

ENSG00000107263 @ hg19

Biotype
protein_coding
Gene Symbol
RAPGEF1
Description
Rap guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:4568]
Coordinates
chr9:134452157-134615461:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
47.35
23.13
0
Alternative 3'ss
3
chr9:134494594-134494596
-
52.65
23.13
0
Exon Skipping
124
chr9:134503936-134504059
-
99.43
19.49
1
Exon Skipping
159
chr9:134494438-134494596
-
19.73
95.74
0
Exon Skipping
258
chr9:134480318-134480575
-
18.09
94.74
0
Exon Skipping
93
chr9:134479348-134479440
-
7.84
50.19
0
Exon Skipping
114
chr9:134525516-134525629
-
55.69
66.13
1
Intron Retention
567
chr9:134525630-134526196
-
8.89
41.84
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000039844 Rapgef1 1-to-1
Mouse mm9 ENSMUSG00000039844 Rapgef1 1-to-1
Rat rn6 ENSRNOG00000014316 Rapgef1 1-to-1
Cow bosTau6 ENSBTAG00000020791 RAPGEF1 1-to-1
Chicken galGal4 ENSGALG00000003712 RAPGEF1 1-to-1
Chicken galGal3 ENSGALG00000003712 RAPGEF1 1-to-1
Zebrafish danRer10 ENSDARG00000015971 rapgef1b 1-to-2
Zebrafish danRer10 ENSDARG00000043593 rapgef1a 1-to-2
Fruitfly dm6 FBgn0259228 C3G 1-to-1