Special

ENSMUSG00000039844 @ mm10

Biotype
protein_coding
Gene Symbol
Rapgef1
Description
Rap guanine nucleotide exchange factor (GEF) 1 [Source:MGI Symbol;Acc:MGI:104580]
Coordinates
chr2:29619720-29740978:+
Assembly
mm10
Other assemblies
mm9

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
45
chr2:29710156-29710200
+
52.76
30.75
0
Alternative 3'ss
48
chr2:29710153-29710200
+
46.77
30.76
0
Exon Skipping
114
chr2:29679737-29679850
+
49.87
100
1
Exon Skipping
153
chr2:29710156-29710308
+
27.17
100
0
Exon Skipping
258
chr2:29719593-29719850
+
22.63
100
0
Exon Skipping
96
chr2:29720643-29720738
+
6
53.03
0
Exon Skipping
117
chr2:29700186-29700302
+
99.56
1.57
1



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000107263 RAPGEF1 1-to-1
Human hg19 ENSG00000107263 RAPGEF1 1-to-1
Rat rn6 ENSRNOG00000014316 Rapgef1 1-to-1
Cow bosTau6 ENSBTAG00000020791 RAPGEF1 1-to-1
Chicken galGal4 ENSGALG00000003712 RAPGEF1 1-to-1
Chicken galGal3 ENSGALG00000003712 RAPGEF1 1-to-1
Zebrafish danRer10 ENSDARG00000015971 rapgef1b 1-to-2
Zebrafish danRer10 ENSDARG00000043593 rapgef1a 1-to-2
Fruitfly dm6 FBgn0259228 C3G 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"