Special

ENSBTAG00000020791 @ bosTau6

Biotype
protein_coding
Gene Symbol
RAPGEF1
Description
Rap guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:HGNC:4568]
Coordinates
chr11:101728372-101793685:-
Assembly
bosTau6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
55.13
15.46
0
Alternative 3'ss
3
chr11:101759427-101759429
-
44.87
15.46
0
Exon Skipping
156
chr11:101759271-101759426
-
15.9
91.73
0
Exon Skipping
273
chr11:101747557-101747829
-
23.56
97.73
0
Exon Skipping
81
chr11:101746122-101746202
-
8.82
82.5
0
Exon Skipping
177
chr11:101809509-101809685
-
10.42
62.45
0
Exon Skipping
114
chr11:101791006-101791119
-
52.18
51.8
1
Exon Skipping
124
chr11:101768056-101768179
-
100
0
1
Intron Retention
1514
chr11:101739317-101740830
-
1.75
50
0
Intron Retention
835
chr11:101733519-101734353
-
2.41
64.77
0
Intron Retention
142
chr11:101732548-101732689
-
1.9
54.55
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000107263 RAPGEF1 1-to-1
Human hg19 ENSG00000107263 RAPGEF1 1-to-1
Mouse mm10 ENSMUSG00000039844 Rapgef1 1-to-1
Mouse mm9 ENSMUSG00000039844 Rapgef1 1-to-1
Rat rn6 ENSRNOG00000014316 Rapgef1 1-to-1
Chicken galGal4 ENSGALG00000003712 RAPGEF1 1-to-1
Chicken galGal3 ENSGALG00000003712 RAPGEF1 1-to-1
Zebrafish danRer10 ENSDARG00000015971 rapgef1b 1-to-2
Zebrafish danRer10 ENSDARG00000043593 rapgef1a 1-to-2
Fruitfly dm6 FBgn0259228 C3G 1-to-1
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