Special

ENSG00000107263 @ hg38

Biotype
protein_coding
Gene Symbol
RAPGEF1
Description
Rap guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4568]
Coordinates
chr9:131576770-131740074:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
47.56
24.08
0
Alternative 3'ss
3
chr9:131619207-131619209
-
52.44
24.08
0
Exon Skipping
124
chr9:131628549-131628672
-
99.24
20.31
1
Exon Skipping
159
chr9:131619051-131619209
-
18.87
95.74
0
Exon Skipping
258
chr9:131604931-131605188
-
16.56
94.74
0
Exon Skipping
93
chr9:131603961-131604053
-
7.43
50.19
0
Exon Skipping
114
chr9:131650129-131650242
-
56.27
72.89
1
Exon Skipping
123
chr9:131598421-131598543
-
2.52
33.98
0
Intron Retention
19646
chr9:131602150-131621795
-
6.02
52.5
0
Intron Retention
567
chr9:131650243-131650809
-
10.03
64.03
0
Intron Retention
8310
chr9:131630325-131638634
-
7.01
28.34
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000039844 Rapgef1 1-to-1
Mouse mm9 ENSMUSG00000039844 Rapgef1 1-to-1
Rat rn6 ENSRNOG00000014316 Rapgef1 1-to-1
Cow bosTau6 ENSBTAG00000020791 RAPGEF1 1-to-1
Chicken galGal4 ENSGALG00000003712 RAPGEF1 1-to-1
Chicken galGal3 ENSGALG00000003712 RAPGEF1 1-to-1
Zebrafish danRer10 ENSDARG00000015971 rapgef1b 1-to-2
Zebrafish danRer10 ENSDARG00000043593 rapgef1a 1-to-2
Fruitfly dm6 FBgn0259228 C3G 1-to-1