Special

ENSG00000127603 @ hg19

Biotype
protein_coding
Gene Symbol
MACF1
Description
microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:13664]
Coordinates
chr1:39546988-39952789:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
55
chr1:39549035-39549089
+
62.82
66.31
0
Exon Skipping
157
chr1:39835702-39835858
+
99.35
31.37
0
Exon Skipping
162
chr1:39888046-39888207
+
99.03
27.81
0
Exon Skipping
327
chr1:39893633-39893959
+
91.88
91.15
0
Exon Skipping
242
chr1:39895499-39895740
+
98.98
28.28
0
Exon Skipping
9
chr1:39902154-39902162
+
85.81
91.23
0
Exon Skipping
15
chr1:39925490-39925504
+
3.15
51.79
0
Exon Skipping
96
chr1:39717518-39717613
+
3.6
61.82
0
Exon Skipping
69
chr1:39935219-39935287
+
3.29
61.79
0
Exon Skipping
111
chr1:39946592-39946702
+
19.28
58.1
0
Exon Skipping
63
chr1:39844133-39844195
+
67.75
92.49
0
Exon Skipping
18
chr1:39930767-39930784
+
52.44
92.59
0
Exon Skipping
5451
chr1:39796875-39802325
+
39.73
100
0
Exon Skipping
150
chr1:39802854-39803003
+
42.55
97.72
0
Exon Skipping
216
chr1:39806174-39806389
+
39.99
98.12
0
Exon Skipping
150
chr1:39806476-39806625
+
41.51
99.35
0
Exon Skipping
234
chr1:39812649-39812882
+
37.94
97.52
0
Intron Retention
1819
chr1:39547216-39549034
+
12.6
36.74
0
Intron Retention
749
chr1:39549090-39549838
+
13
30.77
0
Intron Retention
146743
chr1:39550111-39696853
+
13.02
48.36
0
Intron Retention
22124
chr1:39793026-39815149
+
10.63
43
0
Intron Retention
4928
chr1:39929359-39934286
+
14.22
39.27
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000028649 Macf1 1-to-1
Mouse mm9 ENSMUSG00000028649 Macf1 1-to-1
Rat rn6 ENSRNOG00000016047 Macf1 1-to-1
Cow bosTau6 ENSBTAG00000021024 MACF1 1-to-1
Chicken galGal4 ENSGALG00000003693 1-to-3
Chicken galGal4 ENSGALG00000025779 1-to-3
Chicken galGal4 ENSGALG00000027239 1-to-3
Chicken galGal3 ENSGALG00000003693 MACF1 1-to-3
Zebrafish danRer10 ENSDARG00000028533 macf1a 1-to-1
Fruitfly dm6 FBgn0013733 shot 8-to-1