Special

ENSMUSG00000028649 @ mm9

Biotype
protein_coding
Gene Symbol
Macf1
Description
microtubule-actin crosslinking factor 1 [Source:MGI Symbol;Acc:MGI:108559]
Coordinates
chr4:123026876-123361603:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
65.32
20.81
0
Alternative 3'ss
3
chr4:123046076-123046078
-
34.68
20.81
0
Exon Skipping
55
chr4:123362623-123362677
-
5.48
31.07
0
Exon Skipping
96
chr4:123219735-123219830
-
13.51
100
0
Exon Skipping
69
chr4:123037358-123037426
-
1.42
30.94
0
Exon Skipping
179
chr4:123169884-123170062
-
98.94
95.11
0
Exon Skipping
207
chr4:123071313-123071519
-
99.22
83.99
0
Exon Skipping
12
chr4:123046064-123046075
-
6.97
76.3
0
Exon Skipping
6
chr4:123177996-123178001
-
7.63
61.68
0
Exon Skipping
9
chr4:123063792-123063800
-
76.34
93.21
0
Exon Skipping
102
chr4:123031722-123031823
-
14.9
92.45
0
Exon Skipping
18
chr4:123041300-123041317
-
60.83
100
0
Exon Skipping
327
chr4:123074337-123074663
-
89.56
84.35
0
Exon Skipping
63
chr4:123118846-123118908
-
70.73
90.91
0
Exon Skipping
5331
chr4:123148250-123153580
-
32.31
96.61
0
Exon Skipping
150
chr4:123146966-123147115
-
31.75
96.72
0
Exon Skipping
216
chr4:123143102-123143317
-
32.03
97.22
0
Exon Skipping
150
chr4:123142599-123142748
-
34.24
96.92
0
Exon Skipping
234
chr4:123140781-123141014
-
33.27
96.15
0
Exon Skipping
167
chr4:123076586-123076752
-
99.17
88.87
0
Exon Skipping
85
chr4:123073156-123073240
-
99.04
92.21
0
Exon Skipping
242
chr4:123072249-123072490
-
99.09
96.22
0
Intron Retention
129604
chr4:123231609-123361212
-
8.72
23.06
0
Intron Retention
4245
chr4:123038271-123042515
-
14.15
61.14
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000127603 MACF1 1-to-1
Human hg19 ENSG00000127603 MACF1 1-to-1
Rat rn6 ENSRNOG00000016047 Macf1 1-to-1
Cow bosTau6 ENSBTAG00000021024 MACF1 1-to-1
Chicken galGal4 ENSGALG00000003693 1-to-3
Chicken galGal4 ENSGALG00000025779 1-to-3
Chicken galGal4 ENSGALG00000027239 1-to-3
Chicken galGal3 ENSGALG00000003693 MACF1 1-to-3
Zebrafish danRer10 ENSDARG00000028533 macf1a 1-to-1
Fruitfly dm6 FBgn0013733 shot 6-to-1