Special

ENSG00000130402 @ hg19

Biotype
protein_coding
Gene Symbol
ACTN4
Description
actinin, alpha 4 [Source:HGNC Symbol;Acc:166]
Coordinates
chr19:39138310-39222223:+
Assembly
hg19
Other assemblies
hg38

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
86
chr19:39200897-39200982
+
78.64
93.98
5
Exon Skipping
86
chr19:39201916-39202001
+
22.5
96.82
2
Exon Skipping
78
chr19:39204349-39204426
+
1
30
0
Exon Skipping
81
chr19:39218586-39218666
+
84
67.96
0
Exon Skipping
151
chr19:39212178-39212328
+
99.99
0.63
3
Exon Skipping
148
chr19:39208567-39208714
+
99.79
3.04
3
Exon Skipping
82
chr19:39200035-39200116
+
99.99
0.53
3
Exon Skipping
79
chr19:39198757-39198835
+
99.98
0.96
3
Exon Skipping
88
chr19:39196684-39196771
+
99.88
1.92
3
Exon Skipping
87
chr19:39195574-39195660
+
99.92
1.63
3
Exon Skipping
120
chr19:39191642-39191761
+
99.99
0.31
3
Intron Retention
780
chr19:39200117-39200896
+
6.87
57.47
0
Intron Retention
4126
chr19:39200983-39205108
+
8.88
48.63
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000054808 Actn4 1-to-1
Mouse mm9 ENSMUSG00000054808 Actn4 1-to-1
Rat rn6 ENSRNOG00000020433 Actn4 1-to-1
Cow bosTau6 ENSBTAG00000011215 ACTN4 1-to-1
Chicken galGal4 ENSGALG00000014305 ACTN4 1-to-1
Chicken galGal3 ENSGALG00000014305 1-to-1
Fruitfly dm6 FBgn0000667 Actn 4-to-1
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